RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 PARP10Q53GL7 1025 aa16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 RTL5Q5HYW3 569 aaPredicted RBP16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 G2E3Q7L622 706 aa16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 CNKSR1Q969H4 720 aa16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 PDZRN3Q9UPQ7 1066 aa16.98■□□□□ 0.31
NIPAL3-206ENST00000475663 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
NIPAL3-206ENST00000475663 HSP90AB3PQ58FF7 597 aa16.97■□□□□ 0.31
NIPAL3-206ENST00000475663 MIER1Q8N108 512 aa16.97■□□□□ 0.31
NIPAL3-206ENST00000475663 TRMT112Q9UI30 125 aaKnown RBP16.97■□□□□ 0.31
NIPAL3-206ENST00000475663 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
NIPAL3-206ENST00000475663 GOLGA2Q08379 1002 aa16.96■□□□□ 0.31
NIPAL3-206ENST00000475663 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
NIPAL3-206ENST00000475663 IBTKQ9P2D0 1353 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-206ENST00000475663 JARID2Q92833 1246 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-206ENST00000475663 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
NIPAL3-206ENST00000475663 MYD88Q99836 296 aa16.95■□□□□ 0.3
NIPAL3-206ENST00000475663 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
NIPAL3-206ENST00000475663 ARFGEF1Q9Y6D6 1849 aa16.95■□□□□ 0.3
NIPAL3-206ENST00000475663 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
NIPAL3-206ENST00000475663 VAMP4O75379 141 aa16.94■□□□□ 0.3
NIPAL3-206ENST00000475663 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
NIPAL3-206ENST00000475663 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
NIPAL3-206ENST00000475663 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-206ENST00000475663 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
NIPAL3-206ENST00000475663 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
NIPAL3-206ENST00000475663 ZNF521Q96K83 1311 aa16.94■□□□□ 0.3
NIPAL3-206ENST00000475663 SLX4Q8IY92 1834 aa16.93■□□□□ 0.3
NIPAL3-206ENST00000475663 C7orf43Q8WVR3 580 aa16.93■□□□□ 0.3
NIPAL3-206ENST00000475663 MAP3K2Q9Y2U5 619 aa16.93■□□□□ 0.3
NIPAL3-206ENST00000475663 SLC10A5Q5PT55 438 aa16.92■□□□□ 0.3
NIPAL3-206ENST00000475663 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
NIPAL3-206ENST00000475663 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
NIPAL3-206ENST00000475663 SH3TC1Q8TE82 1336 aa16.92■□□□□ 0.3
NIPAL3-206ENST00000475663 PI4KAP2A4QPH2 592 aa16.91■□□□□ 0.3
NIPAL3-206ENST00000475663 LMNB1P20700 586 aa16.91■□□□□ 0.3
NIPAL3-206ENST00000475663 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
NIPAL3-206ENST00000475663 PI4KAP1Q8N8J0 262 aa16.91■□□□□ 0.3
NIPAL3-206ENST00000475663 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
NIPAL3-206ENST00000475663 CCDC93Q567U6 631 aa16.9■□□□□ 0.3
NIPAL3-206ENST00000475663 RBM17Q96I25 401 aaKnown RBP16.9■□□□□ 0.3
NIPAL3-206ENST00000475663 METTL22Q9BUU2 404 aaPredicted RBP16.9■□□□□ 0.3
NIPAL3-206ENST00000475663 TAOK3Q9H2K8 898 aa16.9■□□□□ 0.3
NIPAL3-206ENST00000475663 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
NIPAL3-206ENST00000475663 CACNA1SQ13698 1873 aa16.9■□□□□ 0.3
NIPAL3-206ENST00000475663 DDX58O95786 925 aaKnown RBP16.89■□□□□ 0.29
NIPAL3-206ENST00000475663 HOXA10P31260 410 aaPredicted RBP16.89■□□□□ 0.29
NIPAL3-206ENST00000475663 KSR2Q6VAB6 950 aa16.89■□□□□ 0.29
NIPAL3-206ENST00000475663 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
NIPAL3-206ENST00000475663 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.29
NIPAL3-206ENST00000475663 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
NIPAL3-206ENST00000475663 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
NIPAL3-206ENST00000475663 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
NIPAL3-206ENST00000475663 FLIIQ13045 1269 aa16.88■□□□□ 0.29
NIPAL3-206ENST00000475663 CWF19L2Q2TBE0 894 aaKnown RBP16.88■□□□□ 0.29
NIPAL3-206ENST00000475663 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
NIPAL3-206ENST00000475663 ABCC4O15439 1325 aa16.88■□□□□ 0.29
NIPAL3-206ENST00000475663 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
NIPAL3-206ENST00000475663 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
NIPAL3-206ENST00000475663 TRIM28Q13263 835 aaKnown RBP16.87■□□□□ 0.29
NIPAL3-206ENST00000475663 FKBP5Q13451 457 aaPredicted RBP16.87■□□□□ 0.29
NIPAL3-206ENST00000475663 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
NIPAL3-206ENST00000475663 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
NIPAL3-206ENST00000475663 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
NIPAL3-206ENST00000475663 F6X3S4 739 aa16.86■□□□□ 0.29
NIPAL3-206ENST00000475663 KIF3CO14782 793 aa16.86■□□□□ 0.29
NIPAL3-206ENST00000475663 SOGA3Q5TF21 947 aa16.86■□□□□ 0.29
NIPAL3-206ENST00000475663 CWC25Q9NXE8 425 aaPredicted RBP16.86■□□□□ 0.29
NIPAL3-206ENST00000475663 FKBP4Q02790 459 aaKnown RBP eCLIP16.85■□□□□ 0.29
NIPAL3-206ENST00000475663 SLFN5Q08AF3 891 aa16.85■□□□□ 0.29
NIPAL3-206ENST00000475663 ZBTB38Q8NAP3 1195 aaPredicted RBP16.85■□□□□ 0.29
NIPAL3-206ENST00000475663 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
NIPAL3-206ENST00000475663 RRAGCQ9HB90 399 aa16.85■□□□□ 0.29
NIPAL3-206ENST00000475663 LTBP3Q9NS15 1303 aa16.85■□□□□ 0.29
NIPAL3-206ENST00000475663 C1QTNF8P60827 252 aa16.84■□□□□ 0.29
NIPAL3-206ENST00000475663 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
NIPAL3-206ENST00000475663 NEURL1BA8MQ27 555 aa16.83■□□□□ 0.28
NIPAL3-206ENST00000475663 E9PSI1 815 aa16.83■□□□□ 0.28
NIPAL3-206ENST00000475663 SBF1O95248 1867 aa16.83■□□□□ 0.28
NIPAL3-206ENST00000475663 PCCAP05165 728 aaPredicted RBP16.83■□□□□ 0.28
NIPAL3-206ENST00000475663 NEXNQ0ZGT2 675 aa16.83■□□□□ 0.28
NIPAL3-206ENST00000475663 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.28
NIPAL3-206ENST00000475663 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
NIPAL3-206ENST00000475663 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.28
NIPAL3-206ENST00000475663 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
NIPAL3-206ENST00000475663 COL4A1P02462 1669 aa16.82■□□□□ 0.28
NIPAL3-206ENST00000475663 SNED1Q8TER0 1413 aa16.82■□□□□ 0.28
NIPAL3-206ENST00000475663 GRAPQ13588 217 aa16.82■□□□□ 0.28
NIPAL3-206ENST00000475663 GRAPLQ8TC17 118 aaPredicted RBP16.82■□□□□ 0.28
NIPAL3-206ENST00000475663 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
NIPAL3-206ENST00000475663 BCL2L13Q9BXK5 485 aa16.82■□□□□ 0.28
NIPAL3-206ENST00000475663 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
NIPAL3-206ENST00000475663 GLTPD2A6NH11 291 aa16.81■□□□□ 0.28
NIPAL3-206ENST00000475663 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
NIPAL3-206ENST00000475663 SF3B3Q15393 1217 aaKnown RBP16.81■□□□□ 0.28
NIPAL3-206ENST00000475663 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
NIPAL3-206ENST00000475663 LAMB2P55268 1798 aa16.8■□□□□ 0.28
NIPAL3-206ENST00000475663 DDX60Q8IY21 1712 aaKnown RBP16.8■□□□□ 0.28
NIPAL3-206ENST00000475663 IARSP41252 1262 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms