RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 NYAP1Q6ZVC0 841 aa7.12□□□□□ -1.27
SRGAP3-205ENST00000475560 ZCRB1Q8TBF4 217 aaKnown RBP7.12□□□□□ -1.27
SRGAP3-205ENST00000475560 RASGRP4Q8TDF6 673 aa7.12□□□□□ -1.27
SRGAP3-205ENST00000475560 ZNF516Q92618 1163 aa7.12□□□□□ -1.27
SRGAP3-205ENST00000475560 SEC16BQ96JE7 1060 aa7.12□□□□□ -1.27
SRGAP3-205ENST00000475560 A6NHS1 94 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 RGS20O76081 388 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 S1PR4O95977 384 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 IL2RAP01589 272 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 GRM5P41594 1212 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 ARID5BQ14865 1188 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 TREML1Q86YW5 311 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 EPS8L3Q8TE67 593 aaKnown RBP7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 ZDHHC1Q8WTX9 485 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 CCDC74AQ96AQ1 378 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 COPRSQ9NQ92 184 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 RAB6BQ9NRW1 208 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 ZNF232Q9UNY5 417 aa7.11□□□□□ -1.27
SRGAP3-205ENST00000475560 TJAP1Q5JTD0 557 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 PI16Q6UXB8 463 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 L3MBTL2Q969R5 705 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 IL21Q9HBE4 155 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 ARHGEF10LQ9HCE6 1279 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 IFT57Q9NWB7 429 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 FAM13BQ9NYF5 915 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 FAM8A1Q9UBU6 413 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 HRH3Q9Y5N1 445 aa7.1□□□□□ -1.27
SRGAP3-205ENST00000475560 ENPP3O14638 875 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 SSBP05455 408 aaKnown RBP eCLIP7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 SKOR1P84550 965 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 TLR1Q15399 786 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 DHX37Q8IY37 1157 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 NBPF15Q8N660 670 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 CNKSR1Q969H4 720 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 ESYT1Q9BSJ8 1104 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 PHACTR1Q9C0D0 580 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 CABP1Q9NZU7 370 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 SIRPGQ9P1W8 387 aa7.09□□□□□ -1.27
SRGAP3-205ENST00000475560 A0A0G2JS52 829 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 ITGBL1O95965 494 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 USP17L7P0C7H9 530 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 FSHRP23945 695 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 PPP1R26Q5T8A7 1209 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 USPL1Q5W0Q7 1092 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 FILIP1Q7Z7B0 1213 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 ZNF295-AS1Q8N0V1 137 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 RNPC3Q96LT9 517 aaKnown RBP7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 ZFYVE28Q9HCC9 887 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 PPME1Q9Y570 386 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 COL4A3BPQ9Y5P4 624 aa7.08□□□□□ -1.28
SRGAP3-205ENST00000475560 TNFRSF21O75509 655 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 IRS1P35568 1242 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 NFX1Q12986 1120 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 TRIM32Q13049 653 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 C1orf53Q5VUE5 145 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 XKR5Q6UX68 686 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 CCDC116Q8IYX3 515 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 SRPK1Q96SB4 655 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 SPON2Q9BUD6 331 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 RSRP1Q9BUV0 290 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 SRCIN1Q9C0H9 1055 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 PCDH12Q9NPG4 1184 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 PARP3Q9Y6F1 533 aa7.07□□□□□ -1.28
SRGAP3-205ENST00000475560 MICAL2O94851 1124 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 ETFBP38117 255 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 CCDC181Q5TID7 509 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 NXPE4Q6UWF7 544 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 MPNDQ8N594 471 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 SPC25Q9HBM1 224 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 KBTBD4Q9NVX7 518 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 KLHL42Q9P2K6 505 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 FOXD3Q9UJU5 478 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 BCS1LQ9Y276 419 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 SUGT1Q9Y2Z0 365 aa7.06□□□□□ -1.28
SRGAP3-205ENST00000475560 KLF4O43474 513 aa7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 DNAJC6O75061 913 aa7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 NASPP49321 788 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 CENPCQ03188 943 aa7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 PLEKHG4Q58EX7 1191 aa7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 ANKS3Q6ZW76 656 aa7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 KIAA0825Q8IV33 1275 aa7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 NOC4LQ9BVI4 516 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 FHDC1Q9C0D6 1143 aaPredicted RBP7.05□□□□□ -1.28
SRGAP3-205ENST00000475560 PPEF1O14829 653 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-205ENST00000475560 PPP1R12AO14974 1030 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-205ENST00000475560 PARNO95453 639 aaKnown RBP7.04□□□□□ -1.28
SRGAP3-205ENST00000475560 RELL1Q8IUW5 271 aa7.04□□□□□ -1.28
SRGAP3-205ENST00000475560 EHBP1Q8NDI1 1231 aa7.04□□□□□ -1.28
SRGAP3-205ENST00000475560 BCO2Q9BYV7 579 aa7.04□□□□□ -1.28
SRGAP3-205ENST00000475560 ADAMTS1Q9UHI8 967 aa7.04□□□□□ -1.28
SRGAP3-205ENST00000475560 EFR3BQ9Y2G0 817 aa7.04□□□□□ -1.28
SRGAP3-205ENST00000475560 POTECB2RU33 542 aa7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 NR5A1Q13285 461 aa7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 CLN3Q13286 438 aa7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 RAB33AQ14088 237 aa7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 LRP10Q7Z4F1 713 aa7.03□□□□□ -1.28
SRGAP3-205ENST00000475560 PPARGC1BQ86YN6 1023 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms