RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 MDFIQ99750 246 aa8.52□□□□□ -1.05
PDE6C-202ENST00000475427 ZMIZ1Q9ULJ6 1067 aa8.52□□□□□ -1.05
PDE6C-202ENST00000475427 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
PDE6C-202ENST00000475427 ADARB2-AS1A8MUL3 147 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 TGFBR3LH3BV60 316 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 PIK3R2O00459 728 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 GNB5O14775 395 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 COL8A1P27658 744 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 SWI5Q1ZZU3 235 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 GPAT2Q6NUI2 795 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 RAB44Q7Z6P3 723 aaPredicted RBP8.51□□□□□ -1.05
PDE6C-202ENST00000475427 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 SUV39H2Q9H5I1 410 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 QTRT2Q9H974 415 aaKnown RBP8.51□□□□□ -1.05
PDE6C-202ENST00000475427 KLK14Q9P0G3 267 aa8.51□□□□□ -1.05
PDE6C-202ENST00000475427 DMGDHQ9UI17 866 aaKnown RBP8.51□□□□□ -1.05
PDE6C-202ENST00000475427 ACIN1Q9UKV3 1341 aaKnown RBP8.51□□□□□ -1.05
PDE6C-202ENST00000475427 ATG7O95352 703 aa8.5□□□□□ -1.05
PDE6C-202ENST00000475427 PLA2G4EQ3MJ16 856 aa8.5□□□□□ -1.05
PDE6C-202ENST00000475427 CCDC97Q96F63 343 aaPredicted RBP8.5□□□□□ -1.05
PDE6C-202ENST00000475427 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
PDE6C-202ENST00000475427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.5□□□□□ -1.05
PDE6C-202ENST00000475427 ARID3CA6NKF2 412 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 IGHA1P01876 353 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 DGKZQ13574 1117 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 XP32Q5T750 250 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 ALYREFQ86V81 257 aaKnown RBP8.49□□□□□ -1.05
PDE6C-202ENST00000475427 STK32AQ8WU08 396 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 BHMTQ93088 406 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 MYO19Q96H55 970 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 SERPINA10Q9UK55 444 aa8.49□□□□□ -1.05
PDE6C-202ENST00000475427 PRMT3O60678 531 aa8.48□□□□□ -1.05
PDE6C-202ENST00000475427 ITGB2P05107 769 aa8.48□□□□□ -1.05
PDE6C-202ENST00000475427 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
PDE6C-202ENST00000475427 C11orf91Q3C1V1 193 aa8.48□□□□□ -1.05
PDE6C-202ENST00000475427 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
PDE6C-202ENST00000475427 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
PDE6C-202ENST00000475427 INPP5BP32019 993 aa8.46□□□□□ -1.06
PDE6C-202ENST00000475427 ADH7P40394 386 aa8.46□□□□□ -1.06
PDE6C-202ENST00000475427 IDH3AP50213 366 aa8.46□□□□□ -1.06
PDE6C-202ENST00000475427 OCLNQ16625 522 aa8.46□□□□□ -1.06
PDE6C-202ENST00000475427 PBXIP1Q96AQ6 731 aa8.46□□□□□ -1.06
PDE6C-202ENST00000475427 EFCC1Q9HA90 598 aa8.46□□□□□ -1.06
PDE6C-202ENST00000475427 NOP53Q9NZM5 478 aaKnown RBP8.46□□□□□ -1.06
PDE6C-202ENST00000475427 LRFN2Q9ULH4 789 aa8.46□□□□□ -1.06
PDE6C-202ENST00000475427 MICAL2O94851 1124 aa8.45□□□□□ -1.06
PDE6C-202ENST00000475427 EPB42P16452 691 aa8.45□□□□□ -1.06
PDE6C-202ENST00000475427 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
PDE6C-202ENST00000475427 CCINQ13939 588 aa8.45□□□□□ -1.06
PDE6C-202ENST00000475427 TMEM164Q5U3C3 297 aa8.45□□□□□ -1.06
PDE6C-202ENST00000475427 TRIM11Q96F44 468 aa8.45□□□□□ -1.06
PDE6C-202ENST00000475427 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
PDE6C-202ENST00000475427 MSTNO14793 375 aa8.44□□□□□ -1.06
PDE6C-202ENST00000475427 ARSDP51689 593 aa8.44□□□□□ -1.06
PDE6C-202ENST00000475427 COX20Q5RI15 118 aa8.44□□□□□ -1.06
PDE6C-202ENST00000475427 IFT43Q96FT9 208 aa8.44□□□□□ -1.06
PDE6C-202ENST00000475427 PNMA5Q96PV4 448 aa8.44□□□□□ -1.06
PDE6C-202ENST00000475427 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
PDE6C-202ENST00000475427 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.44□□□□□ -1.06
PDE6C-202ENST00000475427 M0R082 166 aa8.43□□□□□ -1.06
PDE6C-202ENST00000475427 ALBP02768 609 aa8.43□□□□□ -1.06
PDE6C-202ENST00000475427 MICALL1Q8N3F8 863 aa8.43□□□□□ -1.06
PDE6C-202ENST00000475427 ZNF417Q8TAU3 575 aa8.43□□□□□ -1.06
PDE6C-202ENST00000475427 ZNF587Q96SQ5 575 aaPredicted RBP8.43□□□□□ -1.06
PDE6C-202ENST00000475427 SPOCK3Q9BQ16 436 aa8.43□□□□□ -1.06
PDE6C-202ENST00000475427 PLVAPQ9BX97 442 aa8.43□□□□□ -1.06
PDE6C-202ENST00000475427 UBE2OQ9C0C9 1292 aaKnown RBP8.43□□□□□ -1.06
PDE6C-202ENST00000475427 IGFLR1Q9H665 355 aa8.43□□□□□ -1.06
PDE6C-202ENST00000475427 TBC1D8BQ0IIM8 1120 aa8.42□□□□□ -1.06
PDE6C-202ENST00000475427 CXXC1Q9P0U4 656 aaPredicted RBP8.42□□□□□ -1.06
PDE6C-202ENST00000475427 OPLAHO14841 1288 aa8.41□□□□□ -1.06
PDE6C-202ENST00000475427 NFKB1P19838 968 aa8.41□□□□□ -1.06
PDE6C-202ENST00000475427 COL9A3Q14050 684 aaPredicted RBP8.41□□□□□ -1.06
PDE6C-202ENST00000475427 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
PDE6C-202ENST00000475427 C8orf86Q6ZUL3 223 aa8.41□□□□□ -1.06
PDE6C-202ENST00000475427 CLP1Q92989 425 aaKnown RBP8.41□□□□□ -1.06
PDE6C-202ENST00000475427 COL26A1Q96A83 441 aa8.41□□□□□ -1.06
PDE6C-202ENST00000475427 SAP130Q9H0E3 1048 aa8.41□□□□□ -1.06
PDE6C-202ENST00000475427 C11orf16Q9NQ32 467 aa8.41□□□□□ -1.06
PDE6C-202ENST00000475427 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
PDE6C-202ENST00000475427 PROCP04070 461 aa8.4□□□□□ -1.06
PDE6C-202ENST00000475427 TREML1Q86YW5 311 aa8.4□□□□□ -1.06
PDE6C-202ENST00000475427 DNAJB12Q9NXW2 375 aaKnown RBP8.4□□□□□ -1.06
PDE6C-202ENST00000475427 SLC6A14Q9UN76 642 aa8.4□□□□□ -1.06
PDE6C-202ENST00000475427 C16orf46Q6P387 395 aa8.39□□□□□ -1.07
PDE6C-202ENST00000475427 CAPN12Q6ZSI9 719 aa8.39□□□□□ -1.07
PDE6C-202ENST00000475427 KRT25Q7Z3Z0 450 aa8.39□□□□□ -1.07
PDE6C-202ENST00000475427 CCDC82Q8N4S0 544 aa8.39□□□□□ -1.07
PDE6C-202ENST00000475427 MKNK1Q9BUB5 465 aa8.39□□□□□ -1.07
PDE6C-202ENST00000475427 USP20Q9Y2K6 914 aa8.39□□□□□ -1.07
PDE6C-202ENST00000475427 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
PDE6C-202ENST00000475427 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
PDE6C-202ENST00000475427 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
PDE6C-202ENST00000475427 SASH3O75995 380 aa8.38□□□□□ -1.07
PDE6C-202ENST00000475427 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
PDE6C-202ENST00000475427 BRD2P25440 801 aaKnown RBP8.38□□□□□ -1.07
PDE6C-202ENST00000475427 TARSP26639 723 aaKnown RBP8.38□□□□□ -1.07
PDE6C-202ENST00000475427 ZFATQ9P243 1243 aa8.38□□□□□ -1.07
PDE6C-202ENST00000475427 SLAIN2Q9P270 581 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms