RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 NUTM1Q86Y26 1132 aa23.57■■□□□ 1.36
PCGF3-209ENST00000475288 EAPPQ56P03 285 aaPredicted RBP23.56■■□□□ 1.36
PCGF3-209ENST00000475288 ZNF34Q8IZ26 560 aa23.56■■□□□ 1.36
PCGF3-209ENST00000475288 RPGRQ92834 1020 aaKnown RBP23.56■■□□□ 1.36
PCGF3-209ENST00000475288 CRAMP1Q96RY5 1269 aa23.56■■□□□ 1.36
PCGF3-209ENST00000475288 RRP7AQ9Y3A4 280 aaKnown RBP23.56■■□□□ 1.36
PCGF3-209ENST00000475288 RNF123Q5XPI4 1314 aa23.56■■□□□ 1.36
PCGF3-209ENST00000475288 NGEFQ8N5V2 710 aa23.55■■□□□ 1.36
PCGF3-209ENST00000475288 COL4A5P29400 1685 aa23.54■■□□□ 1.36
PCGF3-209ENST00000475288 NTSR2O95665 410 aa23.54■■□□□ 1.36
PCGF3-209ENST00000475288 SUSD4Q5VX71 490 aa23.54■■□□□ 1.36
PCGF3-209ENST00000475288 GIGYF2Q6Y7W6 1299 aaKnown RBP23.54■■□□□ 1.36
PCGF3-209ENST00000475288 PRDM10Q9NQV6 1147 aa23.54■■□□□ 1.36
PCGF3-209ENST00000475288 MYL6BP14649 208 aa23.53■■□□□ 1.36
PCGF3-209ENST00000475288 EIF6P56537 245 aaKnown RBP23.53■■□□□ 1.36
PCGF3-209ENST00000475288 PARP10Q53GL7 1025 aa23.53■■□□□ 1.36
PCGF3-209ENST00000475288 BABAM1Q9NWV8 329 aa23.53■■□□□ 1.36
PCGF3-209ENST00000475288 CLEC11AQ9Y240 323 aa23.53■■□□□ 1.36
PCGF3-209ENST00000475288 MAPK8IP3Q9UPT6 1336 aa23.53■■□□□ 1.36
PCGF3-209ENST00000475288 RASSF10A6NK89 507 aa23.52■■□□□ 1.36
PCGF3-209ENST00000475288 PPP1R42Q7Z4L9 355 aa23.52■■□□□ 1.36
PCGF3-209ENST00000475288 CNTROBQ8N137 903 aa23.52■■□□□ 1.36
PCGF3-209ENST00000475288 RBM17Q96I25 401 aaKnown RBP23.52■■□□□ 1.36
PCGF3-209ENST00000475288 ZBTB3Q9H5J0 574 aa23.52■■□□□ 1.36
PCGF3-209ENST00000475288 GPTP24298 496 aa23.51■■□□□ 1.35
PCGF3-209ENST00000475288 VEGFBP49765 207 aa23.51■■□□□ 1.35
PCGF3-209ENST00000475288 LRP10Q7Z4F1 713 aa23.51■■□□□ 1.35
PCGF3-209ENST00000475288 THUMPD2Q9BTF0 503 aaKnown RBP23.51■■□□□ 1.35
PCGF3-209ENST00000475288 VPS33BQ9H267 617 aa23.51■■□□□ 1.35
PCGF3-209ENST00000475288 LTBP1Q14766 1721 aa23.5■■□□□ 1.35
PCGF3-209ENST00000475288 PPEF1O14829 653 aaPredicted RBP23.5■■□□□ 1.35
PCGF3-209ENST00000475288 FOXN1O15353 648 aa23.5■■□□□ 1.35
PCGF3-209ENST00000475288 SLC10A5Q5PT55 438 aa23.49■■□□□ 1.35
PCGF3-209ENST00000475288 LMOD1P29536 600 aaPredicted RBP23.48■■□□□ 1.35
PCGF3-209ENST00000475288 CTCFP49711 727 aaPredicted RBP23.48■■□□□ 1.35
PCGF3-209ENST00000475288 MAP1SQ66K74 1059 aaPredicted RBP23.48■■□□□ 1.35
PCGF3-209ENST00000475288 LARGE2Q8N3Y3 721 aa23.48■■□□□ 1.35
PCGF3-209ENST00000475288 AIDAQ96BJ3 306 aa23.48■■□□□ 1.35
PCGF3-209ENST00000475288 NLRP3Q96P20 1036 aa23.48■■□□□ 1.35
PCGF3-209ENST00000475288 WBP1LQ9NX94 342 aa23.48■■□□□ 1.35
PCGF3-209ENST00000475288 TSPYL4Q9UJ04 414 aa23.48■■□□□ 1.35
PCGF3-209ENST00000475288 SCNN1DP51172 638 aa23.47■■□□□ 1.35
PCGF3-209ENST00000475288 PDIA6Q15084 440 aa23.47■■□□□ 1.35
PCGF3-209ENST00000475288 DEFB115Q30KQ5 88 aa23.47■■□□□ 1.35
PCGF3-209ENST00000475288 ANKRD36CQ5JPF3 1778 aa23.47■■□□□ 1.35
PCGF3-209ENST00000475288 USP50Q70EL3 339 aaPredicted RBP23.46■■□□□ 1.35
PCGF3-209ENST00000475288 THSD7BQ9C0I4 1608 aa23.46■■□□□ 1.35
PCGF3-209ENST00000475288 ATP6V0A2Q9Y487 856 aa23.46■■□□□ 1.35
PCGF3-209ENST00000475288 GJA3Q9Y6H8 435 aa23.46■■□□□ 1.35
PCGF3-209ENST00000475288 C3orf67Q6ZVT6 689 aa23.45■■□□□ 1.34
PCGF3-209ENST00000475288 NIM1KQ8IY84 436 aa23.45■■□□□ 1.34
PCGF3-209ENST00000475288 UTP14AQ9BVJ6 771 aaKnown RBP23.45■■□□□ 1.34
PCGF3-209ENST00000475288 DDX21Q9NR30 783 aaKnown RBP eCLIP23.45■■□□□ 1.34
PCGF3-209ENST00000475288 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
PCGF3-209ENST00000475288 HSP90AB3PQ58FF7 597 aa23.44■■□□□ 1.34
PCGF3-209ENST00000475288 RTFDC1Q9BY42 306 aaPredicted RBP23.44■■□□□ 1.34
PCGF3-209ENST00000475288 TMX4Q9H1E5 349 aaPredicted RBP23.44■■□□□ 1.34
PCGF3-209ENST00000475288 SUPT20HQ8NEM7 779 aa23.43■■□□□ 1.34
PCGF3-209ENST00000475288 PPIP5K2O43314 1243 aa23.42■■□□□ 1.34
PCGF3-209ENST00000475288 EPS15P42566 896 aa23.42■■□□□ 1.34
PCGF3-209ENST00000475288 RIPK4P57078 832 aa23.42■■□□□ 1.34
PCGF3-209ENST00000475288 LAMB2P55268 1798 aa23.42■■□□□ 1.34
PCGF3-209ENST00000475288 TRPM7Q96QT4 1865 aa23.41■■□□□ 1.34
PCGF3-209ENST00000475288 ABCC4O15439 1325 aa23.41■■□□□ 1.34
PCGF3-209ENST00000475288 WDR33Q9C0J8 1336 aaKnown RBP23.41■■□□□ 1.34
PCGF3-209ENST00000475288 BBOX1O75936 387 aa23.41■■□□□ 1.34
PCGF3-209ENST00000475288 MAP2K1Q02750 393 aaPredicted RBP23.41■■□□□ 1.34
PCGF3-209ENST00000475288 EIF2S2P20042 333 aaKnown RBP23.4■■□□□ 1.34
PCGF3-209ENST00000475288 RALBP1Q15311 655 aa23.4■■□□□ 1.34
PCGF3-209ENST00000475288 PROSER3Q2NL68 480 aa23.4■■□□□ 1.34
PCGF3-209ENST00000475288 ABT1Q9ULW3 272 aaKnown RBP23.4■■□□□ 1.34
PCGF3-209ENST00000475288 CDHR2Q9BYE9 1310 aa23.39■■□□□ 1.34
PCGF3-209ENST00000475288 TMPOP42166 694 aaKnown RBP23.39■■□□□ 1.33
PCGF3-209ENST00000475288 SLC51AQ86UW1 340 aa23.39■■□□□ 1.33
PCGF3-209ENST00000475288 NLRP10Q86W26 655 aa23.39■■□□□ 1.33
PCGF3-209ENST00000475288 SP8Q8IXZ3 490 aa23.39■■□□□ 1.33
PCGF3-209ENST00000475288 ADARB2Q9NS39 739 aaKnown RBP23.39■■□□□ 1.33
PCGF3-209ENST00000475288 GPRC5DQ9NZD1 345 aa23.39■■□□□ 1.33
PCGF3-209ENST00000475288 ZNRF3Q9ULT6 936 aa23.39■■□□□ 1.33
PCGF3-209ENST00000475288 AOC3Q16853 763 aa23.38■■□□□ 1.33
PCGF3-209ENST00000475288 TCERG1O14776 1098 aaKnown RBP23.37■■□□□ 1.33
PCGF3-209ENST00000475288 ECE1P42892 770 aa23.37■■□□□ 1.33
PCGF3-209ENST00000475288 COPS6Q7L5N1 327 aa23.37■■□□□ 1.33
PCGF3-209ENST00000475288 HSPA8P11142 646 aaKnown RBP23.36■■□□□ 1.33
PCGF3-209ENST00000475288 LBX1P52954 281 aa23.36■■□□□ 1.33
PCGF3-209ENST00000475288 CXCL9Q07325 125 aa23.36■■□□□ 1.33
PCGF3-209ENST00000475288 KIAA2012Q0VF49 1180 aa23.36■■□□□ 1.33
PCGF3-209ENST00000475288 TCIRG1Q13488 830 aa23.36■■□□□ 1.33
PCGF3-209ENST00000475288 TMC4Q7Z404 712 aa23.36■■□□□ 1.33
PCGF3-209ENST00000475288 LRRC37AA6NMS7 1700 aa23.36■■□□□ 1.33
PCGF3-209ENST00000475288 ANXA1P04083 346 aa23.35■■□□□ 1.33
PCGF3-209ENST00000475288 DPP8Q6V1X1 898 aaPredicted RBP23.35■■□□□ 1.33
PCGF3-209ENST00000475288 XAGE3Q8WTP9 111 aa23.35■■□□□ 1.33
PCGF3-209ENST00000475288 PGAP2Q9UHJ9 254 aa23.35■■□□□ 1.33
PCGF3-209ENST00000475288 SH3TC1Q8TE82 1336 aa23.34■■□□□ 1.33
PCGF3-209ENST00000475288 CHL1O00533 1208 aa23.34■■□□□ 1.33
PCGF3-209ENST00000475288 GRAPQ13588 217 aa23.34■■□□□ 1.33
PCGF3-209ENST00000475288 CST9Q5W186 159 aa23.34■■□□□ 1.33
PCGF3-209ENST00000475288 DDX46Q7L014 1031 aaKnown RBP23.34■■□□□ 1.33
PCGF3-209ENST00000475288 MPNDQ8N594 471 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms