RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TTLL7Q6ZT98 887 aa12.3□□□□□ -0.44
PDPN-204ENST00000475043 RNF181Q9P0P0 153 aa12.3□□□□□ -0.44
PDPN-204ENST00000475043 ERBB4Q15303 1308 aa12.3□□□□□ -0.44
PDPN-204ENST00000475043 CHL1O00533 1208 aa12.29□□□□□ -0.44
PDPN-204ENST00000475043 RASSF7Q02833 373 aa12.29□□□□□ -0.44
PDPN-204ENST00000475043 KRT24Q2M2I5 525 aa12.29□□□□□ -0.44
PDPN-204ENST00000475043 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 ANP32CO43423 234 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 C21orf2O43822 256 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 ANXA1P04083 346 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 SRGNP10124 158 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 GPTP24298 496 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 CCDC184Q52MB2 194 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 CNKSR1Q969H4 720 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 MASTLQ96GX5 879 aa12.28□□□□□ -0.44
PDPN-204ENST00000475043 SLX4Q8IY92 1834 aa12.27□□□□□ -0.44
PDPN-204ENST00000475043 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
PDPN-204ENST00000475043 AIMP1Q12904 312 aaKnown RBP12.27□□□□□ -0.45
PDPN-204ENST00000475043 PROSER3Q2NL68 480 aa12.27□□□□□ -0.45
PDPN-204ENST00000475043 STYK1Q6J9G0 422 aa12.27□□□□□ -0.45
PDPN-204ENST00000475043 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
PDPN-204ENST00000475043 NYXQ9GZU5 481 aa12.27□□□□□ -0.45
PDPN-204ENST00000475043 TIAM2Q8IVF5 1701 aa12.26□□□□□ -0.45
PDPN-204ENST00000475043 LMNB1P20700 586 aa12.26□□□□□ -0.45
PDPN-204ENST00000475043 CALD1Q05682 793 aaKnown RBP12.26□□□□□ -0.45
PDPN-204ENST00000475043 PDIA6Q15084 440 aa12.26□□□□□ -0.45
PDPN-204ENST00000475043 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
PDPN-204ENST00000475043 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
PDPN-204ENST00000475043 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
PDPN-204ENST00000475043 FAM212AQ96EL1 285 aa12.26□□□□□ -0.45
PDPN-204ENST00000475043 MRS2Q9HD23 443 aa12.26□□□□□ -0.45
PDPN-204ENST00000475043 TNRC6CQ9HCJ0 1690 aaKnown RBP12.26□□□□□ -0.45
PDPN-204ENST00000475043 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 NPR1P16066 1061 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 COPS6Q7L5N1 327 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 LRP10Q7Z4F1 713 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 UBN2Q6ZU65 1347 aa12.25□□□□□ -0.45
PDPN-204ENST00000475043 NFKBIEO00221 500 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 VASPP50552 380 aaPredicted RBP12.24□□□□□ -0.45
PDPN-204ENST00000475043 GNAI1P63096 354 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 SUSD4Q5VX71 490 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 PPP1R42Q7Z4L9 355 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 ZNF34Q8IZ26 560 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 KDM2BQ8NHM5 1336 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 XAGE3Q8WTP9 111 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 ABCC12Q96J65 1359 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 NMRK2Q9NPI5 230 aa12.24□□□□□ -0.45
PDPN-204ENST00000475043 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDPN-204ENST00000475043 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
PDPN-204ENST00000475043 KIF3CO14782 793 aa12.23□□□□□ -0.45
PDPN-204ENST00000475043 HOXB7P09629 217 aa12.23□□□□□ -0.45
PDPN-204ENST00000475043 ALDH1B1P30837 517 aa12.23□□□□□ -0.45
PDPN-204ENST00000475043 PRELPP51888 382 aa12.23□□□□□ -0.45
PDPN-204ENST00000475043 SOGA3Q5TF21 947 aa12.23□□□□□ -0.45
PDPN-204ENST00000475043 DUSP27Q5VZP5 1158 aa12.23□□□□□ -0.45
PDPN-204ENST00000475043 IFT57Q9NWB7 429 aa12.23□□□□□ -0.45
PDPN-204ENST00000475043 DBF4Q9UBU7 674 aaPredicted RBP12.23□□□□□ -0.45
PDPN-204ENST00000475043 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
PDPN-204ENST00000475043 DICER1Q9UPY3 1922 aaKnown RBP12.23□□□□□ -0.45
PDPN-204ENST00000475043 IBTKQ9P2D0 1353 aaPredicted RBP12.22□□□□□ -0.45
PDPN-204ENST00000475043 KLRG2A4D1S0 409 aaPredicted RBP12.22□□□□□ -0.45
PDPN-204ENST00000475043 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
PDPN-204ENST00000475043 PARP10Q53GL7 1025 aa12.22□□□□□ -0.45
PDPN-204ENST00000475043 HSP90AB3PQ58FF7 597 aa12.22□□□□□ -0.45
PDPN-204ENST00000475043 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
PDPN-204ENST00000475043 RPGRQ92834 1020 aaKnown RBP12.22□□□□□ -0.45
PDPN-204ENST00000475043 TAOK3Q9H2K8 898 aa12.22□□□□□ -0.45
PDPN-204ENST00000475043 ZC3H4Q9UPT8 1303 aaKnown RBP12.21□□□□□ -0.45
PDPN-204ENST00000475043 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
PDPN-204ENST00000475043 NTSR2O95665 410 aa12.21□□□□□ -0.45
PDPN-204ENST00000475043 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.45
PDPN-204ENST00000475043 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
PDPN-204ENST00000475043 SLC39A7Q92504 469 aa12.21□□□□□ -0.45
PDPN-204ENST00000475043 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.45
PDPN-204ENST00000475043 RRAGCQ9HB90 399 aa12.21□□□□□ -0.45
PDPN-204ENST00000475043 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.45
PDPN-204ENST00000475043 TOMM70O94826 608 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 C7P10643 843 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 TIE1P35590 1138 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 OLFM4Q6UX06 510 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 ZNF428Q96B54 188 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 HYPKQ9NX55 129 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
PDPN-204ENST00000475043 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
PDPN-204ENST00000475043 GLTPD2A6NH11 291 aa12.19□□□□□ -0.46
PDPN-204ENST00000475043 TCIRG1Q13488 830 aa12.19□□□□□ -0.46
PDPN-204ENST00000475043 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
PDPN-204ENST00000475043 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
PDPN-204ENST00000475043 PLBD2Q8NHP8 589 aa12.19□□□□□ -0.46
PDPN-204ENST00000475043 C7orf43Q8WVR3 580 aa12.19□□□□□ -0.46
PDPN-204ENST00000475043 NLRP3Q96P20 1036 aa12.19□□□□□ -0.46
PDPN-204ENST00000475043 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
PDPN-204ENST00000475043 SALL2Q9Y467 1007 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms