RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 NBPF10Q6P3W6 841 aaKnown RBP7.9□□□□□ -1.14
CPSF7-210ENST00000474684 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
CPSF7-210ENST00000474684 NBPF15Q8N660 670 aa7.9□□□□□ -1.14
CPSF7-210ENST00000474684 NMRK2Q9NPI5 230 aa7.9□□□□□ -1.14
CPSF7-210ENST00000474684 PIM2Q9P1W9 311 aa7.9□□□□□ -1.14
CPSF7-210ENST00000474684 NUDCQ9Y266 331 aa7.9□□□□□ -1.14
CPSF7-210ENST00000474684 USP16Q9Y5T5 823 aa7.9□□□□□ -1.14
CPSF7-210ENST00000474684 ABCC12Q96J65 1359 aa7.89□□□□□ -1.15
CPSF7-210ENST00000474684 G3V3G9 751 aa7.89□□□□□ -1.15
CPSF7-210ENST00000474684 STARD3NLO95772 234 aa7.89□□□□□ -1.15
CPSF7-210ENST00000474684 DALRD3Q5D0E6 543 aaKnown RBP7.89□□□□□ -1.15
CPSF7-210ENST00000474684 C9orf131Q5VYM1 1079 aa7.89□□□□□ -1.15
CPSF7-210ENST00000474684 ZNF710Q8N1W2 664 aa7.89□□□□□ -1.15
CPSF7-210ENST00000474684 PLEKHF1Q96S99 279 aa7.89□□□□□ -1.15
CPSF7-210ENST00000474684 MIS18AQ9NYP9 233 aa7.89□□□□□ -1.15
CPSF7-210ENST00000474684 SCN4AP35499 1836 aa7.88□□□□□ -1.15
CPSF7-210ENST00000474684 SPEF2Q9C093 1822 aa7.88□□□□□ -1.15
CPSF7-210ENST00000474684 NFKBIEO00221 500 aa7.88□□□□□ -1.15
CPSF7-210ENST00000474684 DOK7Q18PE1 504 aa7.88□□□□□ -1.15
CPSF7-210ENST00000474684 DZIP3Q86Y13 1208 aaKnown RBP7.88□□□□□ -1.15
CPSF7-210ENST00000474684 C2CD5Q86YS7 1000 aa7.88□□□□□ -1.15
CPSF7-210ENST00000474684 RNF181Q9P0P0 153 aa7.88□□□□□ -1.15
CPSF7-210ENST00000474684 COL4A1P02462 1669 aa7.88□□□□□ -1.15
CPSF7-210ENST00000474684 LRRC37AA6NMS7 1700 aa7.87□□□□□ -1.15
CPSF7-210ENST00000474684 COL4A5P29400 1685 aa7.87□□□□□ -1.15
CPSF7-210ENST00000474684 A0A087WZG4 1122 aa7.87□□□□□ -1.15
CPSF7-210ENST00000474684 GSE1Q14687 1217 aa7.87□□□□□ -1.15
CPSF7-210ENST00000474684 SLC51AQ86UW1 340 aa7.87□□□□□ -1.15
CPSF7-210ENST00000474684 RTF1Q92541 710 aaKnown RBP7.87□□□□□ -1.15
CPSF7-210ENST00000474684 MYH3P11055 1940 aa7.87□□□□□ -1.15
CPSF7-210ENST00000474684 ADAMTSL1Q8N6G6 1762 aa7.87□□□□□ -1.15
CPSF7-210ENST00000474684 SNED1Q8TER0 1413 aa7.86□□□□□ -1.15
CPSF7-210ENST00000474684 LTBP1Q14766 1721 aa7.86□□□□□ -1.15
CPSF7-210ENST00000474684 SNRPA1P09661 255 aaKnown RBP7.86□□□□□ -1.15
CPSF7-210ENST00000474684 NFE2L2Q16236 605 aa7.86□□□□□ -1.15
CPSF7-210ENST00000474684 CNBD1Q8NA66 436 aa7.86□□□□□ -1.15
CPSF7-210ENST00000474684 TEX13AQ9BXU3 409 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-210ENST00000474684 RIMBP2O15034 1052 aa7.85□□□□□ -1.15
CPSF7-210ENST00000474684 HTATSF1O43719 755 aaKnown RBP7.85□□□□□ -1.15
CPSF7-210ENST00000474684 CHRM1P11229 460 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-210ENST00000474684 HOXB3P14651 431 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-210ENST00000474684 HSPA6P17066 643 aa7.85□□□□□ -1.15
CPSF7-210ENST00000474684 DDX10Q13206 875 aaKnown RBP7.85□□□□□ -1.15
CPSF7-210ENST00000474684 HLFQ16534 295 aa7.85□□□□□ -1.15
CPSF7-210ENST00000474684 RRP7AQ9Y3A4 280 aaKnown RBP7.85□□□□□ -1.15
CPSF7-210ENST00000474684 UBN2Q6ZU65 1347 aa7.84□□□□□ -1.15
CPSF7-210ENST00000474684 MAPK8IP3Q9UPT6 1336 aa7.84□□□□□ -1.15
CPSF7-210ENST00000474684 FAM177BA6PVY3 158 aa7.84□□□□□ -1.15
CPSF7-210ENST00000474684 H0YIN7 160 aa7.84□□□□□ -1.15
CPSF7-210ENST00000474684 EIF4A1P60842 406 aaKnown RBP7.84□□□□□ -1.15
CPSF7-210ENST00000474684 TAF7Q15545 349 aaPredicted RBP7.84□□□□□ -1.15
CPSF7-210ENST00000474684 OLFM4Q6UX06 510 aa7.84□□□□□ -1.15
CPSF7-210ENST00000474684 TTLL7Q6ZT98 887 aa7.84□□□□□ -1.15
CPSF7-210ENST00000474684 CCDC146Q8IYE0 955 aa7.84□□□□□ -1.15
CPSF7-210ENST00000474684 TTLL6Q8N841 843 aa7.84□□□□□ -1.15
CPSF7-210ENST00000474684 ZNF622Q969S3 477 aaKnown RBP eCLIP7.84□□□□□ -1.152e-6■□□□□ 9.3
CPSF7-210ENST00000474684 TRPM7Q96QT4 1865 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 MYBBP1AQ9BQG0 1328 aaKnown RBP7.83□□□□□ -1.16
CPSF7-210ENST00000474684 CACNA1FO60840 1977 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 PCNTO95613 3336 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 C21orf2O43822 256 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 ANXA1P04083 346 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 SRGNP10124 158 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 HTRA3P83110 453 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 KRT24Q2M2I5 525 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 PROSER3Q2NL68 480 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 PRPF40BQ6NWY9 871 aaKnown RBP7.83□□□□□ -1.16
CPSF7-210ENST00000474684 LRP10Q7Z4F1 713 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 NGEFQ8N5V2 710 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 SETDB2Q96T68 719 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 BRIP1Q9BX63 1249 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 NIP7Q9Y221 180 aaKnown RBP eCLIP7.83□□□□□ -1.16
CPSF7-210ENST00000474684 A0A1B0GUL6 1792 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 RIC1Q4ADV7 1423 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 DUOX1Q9NRD9 1551 aa7.83□□□□□ -1.16
CPSF7-210ENST00000474684 PSME4Q14997 1843 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 POLR2AP24928 1970 aaKnown RBP7.82□□□□□ -1.16
CPSF7-210ENST00000474684 SCN9AQ15858 1988 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 TOMM70O94826 608 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 MYL6BP14649 208 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 LMNB1P20700 586 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 PDE6BP35913 854 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 TMPOP42166 694 aaKnown RBP7.82□□□□□ -1.16
CPSF7-210ENST00000474684 PSEN1P49768 467 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 ST5P78524 1137 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 RALBP1Q15311 655 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 NBPF5PQ86XG9 351 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-210ENST00000474684 NUTM1Q86Y26 1132 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 ZBTB3Q9H5J0 574 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 BOLA1Q9Y3E2 137 aa7.82□□□□□ -1.16
CPSF7-210ENST00000474684 ZNF646O15015 1829 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-210ENST00000474684 IBTKQ9P2D0 1353 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-210ENST00000474684 MAP3K15Q6ZN16 1313 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 ZC3H4Q9UPT8 1303 aaKnown RBP7.81□□□□□ -1.16
CPSF7-210ENST00000474684 NPHP1O15259 732 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 NEFMP07197 916 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 GPTP24298 496 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 RIPK4P57078 832 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 PDIA6Q15084 440 aa7.81□□□□□ -1.16
CPSF7-210ENST00000474684 STYK1Q6J9G0 422 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms