RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CC2D2BQ6DHV5 1058 aa19.62■□□□□ 0.73
VARS-223ENST00000474643 OLFM4Q6UX06 510 aa19.62■□□□□ 0.73
VARS-223ENST00000474643 COPS6Q7L5N1 327 aa19.62■□□□□ 0.73
VARS-223ENST00000474643 ZNF34Q8IZ26 560 aa19.62■□□□□ 0.73
VARS-223ENST00000474643 C7orf43Q8WVR3 580 aa19.62■□□□□ 0.73
VARS-223ENST00000474643 JDP2Q8WYK2 163 aa19.62■□□□□ 0.73
VARS-223ENST00000474643 DICER1Q9UPY3 1922 aaKnown RBP19.62■□□□□ 0.73
VARS-223ENST00000474643 WDR90Q96KV7 1748 aa19.62■□□□□ 0.73
VARS-223ENST00000474643 CHL1O00533 1208 aa19.61■□□□□ 0.73
VARS-223ENST00000474643 APAF1O14727 1248 aa19.61■□□□□ 0.73
VARS-223ENST00000474643 PPEF1O14829 653 aaPredicted RBP19.61■□□□□ 0.73
VARS-223ENST00000474643 DDNO94850 711 aaPredicted RBP19.61■□□□□ 0.73
VARS-223ENST00000474643 NTSR2O95665 410 aa19.61■□□□□ 0.73
VARS-223ENST00000474643 CRY2Q49AN0 593 aa19.61■□□□□ 0.73
VARS-223ENST00000474643 DDX21Q9NR30 783 aaKnown RBP eCLIP19.61■□□□□ 0.73
VARS-223ENST00000474643 TRIM35Q9UPQ4 493 aa19.61■□□□□ 0.73
VARS-223ENST00000474643 IARSP41252 1262 aaKnown RBP19.6■□□□□ 0.73
VARS-223ENST00000474643 HTRA3P83110 453 aa19.6■□□□□ 0.73
VARS-223ENST00000474643 PDIA6Q15084 440 aa19.6■□□□□ 0.73
VARS-223ENST00000474643 KRT24Q2M2I5 525 aa19.6■□□□□ 0.73
VARS-223ENST00000474643 DIEXFQ68CQ4 756 aaKnown RBP19.6■□□□□ 0.73
VARS-223ENST00000474643 FAM9BQ8IZU0 186 aa19.6■□□□□ 0.73
VARS-223ENST00000474643 SYNE4Q8N205 404 aa19.6■□□□□ 0.73
VARS-223ENST00000474643 CHPF2Q9P2E5 772 aa19.6■□□□□ 0.73
VARS-223ENST00000474643 RIC1Q4ADV7 1423 aa19.59■□□□□ 0.73
VARS-223ENST00000474643 GRIPAP1Q4V328 841 aa19.59■□□□□ 0.73
VARS-223ENST00000474643 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
VARS-223ENST00000474643 TRMT112Q9UI30 125 aaKnown RBP19.59■□□□□ 0.73
VARS-223ENST00000474643 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.73
VARS-223ENST00000474643 HOXB7P09629 217 aa19.58■□□□□ 0.72
VARS-223ENST00000474643 DBF4Q9UBU7 674 aaPredicted RBP19.58■□□□□ 0.72
VARS-223ENST00000474643 HOXA10P31260 410 aaPredicted RBP19.57■□□□□ 0.72
VARS-223ENST00000474643 EIF6P56537 245 aaKnown RBP19.57■□□□□ 0.72
VARS-223ENST00000474643 EAPPQ56P03 285 aaPredicted RBP19.57■□□□□ 0.72
VARS-223ENST00000474643 CRAMP1Q96RY5 1269 aa19.57■□□□□ 0.72
VARS-223ENST00000474643 PSMD1Q99460 953 aa19.57■□□□□ 0.72
VARS-223ENST00000474643 GNAI1P63096 354 aa19.56■□□□□ 0.72
VARS-223ENST00000474643 DUSP27Q5VZP5 1158 aa19.56■□□□□ 0.72
VARS-223ENST00000474643 CHADLQ6NUI6 762 aa19.56■□□□□ 0.72
VARS-223ENST00000474643 LARGE2Q8N3Y3 721 aa19.56■□□□□ 0.72
VARS-223ENST00000474643 KLRG1Q96E93 195 aa19.56■□□□□ 0.72
VARS-223ENST00000474643 HYPKQ9NX55 129 aa19.56■□□□□ 0.72
VARS-223ENST00000474643 CLEC11AQ9Y240 323 aa19.56■□□□□ 0.72
VARS-223ENST00000474643 SH3TC1Q8TE82 1336 aa19.55■□□□□ 0.72
VARS-223ENST00000474643 TCIRG1Q13488 830 aa19.55■□□□□ 0.72
VARS-223ENST00000474643 DDX46Q7L014 1031 aaKnown RBP19.55■□□□□ 0.72
VARS-223ENST00000474643 LRP10Q7Z4F1 713 aa19.55■□□□□ 0.72
VARS-223ENST00000474643 NLRP10Q86W26 655 aa19.55■□□□□ 0.72
VARS-223ENST00000474643 MBIPQ9NS73 344 aa19.55■□□□□ 0.72
VARS-223ENST00000474643 HACL1Q9UJ83 578 aa19.55■□□□□ 0.72
VARS-223ENST00000474643 GJA3Q9Y6H8 435 aa19.55■□□□□ 0.72
VARS-223ENST00000474643 ZNF541Q9H0D2 1346 aa19.54■□□□□ 0.72
VARS-223ENST00000474643 POTECB2RU33 542 aa19.54■□□□□ 0.72
VARS-223ENST00000474643 HCLS1P14317 486 aaPredicted RBP19.54■□□□□ 0.72
VARS-223ENST00000474643 GOLGA2Q08379 1002 aa19.54■□□□□ 0.72
VARS-223ENST00000474643 IFT57Q9NWB7 429 aa19.54■□□□□ 0.72
VARS-223ENST00000474643 ANKRD36CQ5JPF3 1778 aa19.53■□□□□ 0.72
VARS-223ENST00000474643 LMOD1P29536 600 aaPredicted RBP19.53■□□□□ 0.72
VARS-223ENST00000474643 ANKRD13DQ6ZTN6 518 aa19.53■□□□□ 0.72
VARS-223ENST00000474643 C3orf67Q6ZVT6 689 aa19.53■□□□□ 0.72
VARS-223ENST00000474643 NIM1KQ8IY84 436 aa19.53■□□□□ 0.72
VARS-223ENST00000474643 DNAJC5GQ8N7S2 189 aa19.53■□□□□ 0.72
VARS-223ENST00000474643 PLBD2Q8NHP8 589 aa19.53■□□□□ 0.72
VARS-223ENST00000474643 ZNF428Q96B54 188 aa19.53■□□□□ 0.72
VARS-223ENST00000474643 CHMP4AQ9BY43 222 aa19.53■□□□□ 0.72
VARS-223ENST00000474643 PPIP5K2O43314 1243 aa19.52■□□□□ 0.72
VARS-223ENST00000474643 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.72
VARS-223ENST00000474643 LDHDQ86WU2 507 aa19.52■□□□□ 0.72
VARS-223ENST00000474643 GPC2Q8N158 579 aa19.52■□□□□ 0.72
VARS-223ENST00000474643 SUPT20HQ8NEM7 779 aa19.52■□□□□ 0.72
VARS-223ENST00000474643 L3MBTL3Q96JM7 780 aaPredicted RBP19.52■□□□□ 0.72
VARS-223ENST00000474643 ABCC4O15439 1325 aa19.51■□□□□ 0.71
VARS-223ENST00000474643 ELL2O00472 640 aaPredicted RBP19.51■□□□□ 0.71
VARS-223ENST00000474643 SLC10A5Q5PT55 438 aa19.51■□□□□ 0.71
VARS-223ENST00000474643 PNMA8AQ86V59 439 aaPredicted RBP19.51■□□□□ 0.71
VARS-223ENST00000474643 TAF1DQ9H5J8 278 aaPredicted RBP19.51■□□□□ 0.71
VARS-223ENST00000474643 ATP6V0A2Q9Y487 856 aa19.51■□□□□ 0.71
VARS-223ENST00000474643 ATP5J2-PTCD1G3V325 749 aa19.5■□□□□ 0.71
VARS-223ENST00000474643 FZD9O00144 591 aa19.5■□□□□ 0.71
VARS-223ENST00000474643 BBOX1O75936 387 aa19.5■□□□□ 0.71
VARS-223ENST00000474643 EPHX2P34913 555 aa19.5■□□□□ 0.71
VARS-223ENST00000474643 DPP8Q6V1X1 898 aaPredicted RBP19.5■□□□□ 0.71
VARS-223ENST00000474643 SALL2Q9Y467 1007 aaPredicted RBP19.5■□□□□ 0.71
VARS-223ENST00000474643 SCN4AP35499 1836 aa19.49■□□□□ 0.71
VARS-223ENST00000474643 POTEIP0CG38 1075 aa19.49■□□□□ 0.71
VARS-223ENST00000474643 POTEJP0CG39 1038 aa19.49■□□□□ 0.71
VARS-223ENST00000474643 DDX58O95786 925 aaKnown RBP19.48■□□□□ 0.71
VARS-223ENST00000474643 HSP90B1P14625 803 aaKnown RBP19.48■□□□□ 0.71
VARS-223ENST00000474643 AOC3Q16853 763 aa19.48■□□□□ 0.71
VARS-223ENST00000474643 RTL5Q5HYW3 569 aaPredicted RBP19.48■□□□□ 0.71
VARS-223ENST00000474643 CCER2I3L3R5 266 aa19.47■□□□□ 0.71
VARS-223ENST00000474643 GRAPQ13588 217 aa19.47■□□□□ 0.71
VARS-223ENST00000474643 MPNDQ8N594 471 aa19.47■□□□□ 0.71
VARS-223ENST00000474643 GRAPLQ8TC17 118 aaPredicted RBP19.47■□□□□ 0.71
VARS-223ENST00000474643 FAM89AQ96GI7 184 aa19.47■□□□□ 0.71
VARS-223ENST00000474643 CCDC30Q5VVM6 783 aa19.46■□□□□ 0.71
VARS-223ENST00000474643 TMC4Q7Z404 712 aa19.46■□□□□ 0.71
VARS-223ENST00000474643 SP8Q8IXZ3 490 aa19.46■□□□□ 0.71
VARS-223ENST00000474643 ZNF853P0CG23 659 aa19.45■□□□□ 0.7
VARS-223ENST00000474643 STK31Q9BXU1 1019 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms