RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 CHPF2Q9P2E5 772 aa17.35■□□□□ 0.37
NELFCD-204ENST00000474543 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
NELFCD-204ENST00000474543 WNK3Q9BYP7 1800 aa17.35■□□□□ 0.37
NELFCD-204ENST00000474543 PI4KAP2A4QPH2 592 aa17.35■□□□□ 0.37
NELFCD-204ENST00000474543 AK2P54819 239 aa17.35■□□□□ 0.37
NELFCD-204ENST00000474543 PI4KAP1Q8N8J0 262 aa17.35■□□□□ 0.37
NELFCD-204ENST00000474543 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
NELFCD-204ENST00000474543 LGR6Q9HBX8 967 aa17.35■□□□□ 0.37
NELFCD-204ENST00000474543 DISP2A7MBM2 1401 aa17.34■□□□□ 0.37
NELFCD-204ENST00000474543 EXOC5O00471 708 aa17.34■□□□□ 0.37
NELFCD-204ENST00000474543 PHF14O94880 888 aa17.34■□□□□ 0.37
NELFCD-204ENST00000474543 HOXB7P09629 217 aa17.34■□□□□ 0.37
NELFCD-204ENST00000474543 USP42Q9H9J4 1324 aaKnown RBP17.34■□□□□ 0.37
NELFCD-204ENST00000474543 R3HCC1Q9Y3T6 440 aaKnown RBP17.34■□□□□ 0.37
NELFCD-204ENST00000474543 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
NELFCD-204ENST00000474543 GLIPR1L2Q4G1C9 344 aa17.33■□□□□ 0.37
NELFCD-204ENST00000474543 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.37
NELFCD-204ENST00000474543 RUFY3Q7L099 469 aa17.33■□□□□ 0.37
NELFCD-204ENST00000474543 ZSCAN22P10073 491 aaPredicted RBP17.33■□□□□ 0.36
NELFCD-204ENST00000474543 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.36
NELFCD-204ENST00000474543 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.36
NELFCD-204ENST00000474543 KCNQ3O43525 872 aa17.32■□□□□ 0.36
NELFCD-204ENST00000474543 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
NELFCD-204ENST00000474543 LARP6Q9BRS8 491 aaKnown RBP17.32■□□□□ 0.36
NELFCD-204ENST00000474543 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
NELFCD-204ENST00000474543 CNPY2Q9Y2B0 182 aa17.32■□□□□ 0.36
NELFCD-204ENST00000474543 TTC41PQ6P2S7 1318 aa17.32■□□□□ 0.36
NELFCD-204ENST00000474543 FAM182BQ5T319 152 aa17.31■□□□□ 0.36
NELFCD-204ENST00000474543 EP400Q96L91 3159 aa17.31■□□□□ 0.36
NELFCD-204ENST00000474543 ADCY9O60503 1353 aa17.31■□□□□ 0.36
NELFCD-204ENST00000474543 STX6O43752 255 aa17.31■□□□□ 0.36
NELFCD-204ENST00000474543 GLRX3O76003 335 aaKnown RBP17.31■□□□□ 0.36
NELFCD-204ENST00000474543 ANXA1P04083 346 aa17.31■□□□□ 0.36
NELFCD-204ENST00000474543 SYT1P21579 422 aa17.31■□□□□ 0.36
NELFCD-204ENST00000474543 CSPP1Q1MSJ5 1256 aa17.31■□□□□ 0.36
NELFCD-204ENST00000474543 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.31■□□□□ 0.36
NELFCD-204ENST00000474543 MEGF6O75095 1541 aa17.3■□□□□ 0.36
NELFCD-204ENST00000474543 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
NELFCD-204ENST00000474543 MTX1Q13505 466 aa17.3■□□□□ 0.36
NELFCD-204ENST00000474543 CCDC183Q5T5S1 534 aa17.3■□□□□ 0.36
NELFCD-204ENST00000474543 ZCRB1Q8TBF4 217 aaKnown RBP17.3■□□□□ 0.36
NELFCD-204ENST00000474543 NCAPD2Q15021 1401 aa17.29■□□□□ 0.36
NELFCD-204ENST00000474543 F13A1P00488 732 aa17.29■□□□□ 0.36
NELFCD-204ENST00000474543 CPA1P15085 419 aa17.29■□□□□ 0.36
NELFCD-204ENST00000474543 CASTP20810 708 aaKnown RBP17.29■□□□□ 0.36
NELFCD-204ENST00000474543 OS9Q13438 667 aaPredicted RBP17.29■□□□□ 0.36
NELFCD-204ENST00000474543 UVSSAQ2YD98 709 aa17.29■□□□□ 0.36
NELFCD-204ENST00000474543 FAM184AQ8NB25 1140 aa17.29■□□□□ 0.36
NELFCD-204ENST00000474543 HYPKQ9NX55 129 aa17.29■□□□□ 0.36
NELFCD-204ENST00000474543 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
NELFCD-204ENST00000474543 TNS2Q63HR2 1409 aa17.28■□□□□ 0.36
NELFCD-204ENST00000474543 LARGE1O95461 756 aa17.28■□□□□ 0.36
NELFCD-204ENST00000474543 PTH1RQ03431 593 aa17.28■□□□□ 0.36
NELFCD-204ENST00000474543 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
NELFCD-204ENST00000474543 PDCL3Q9H2J4 239 aa17.28■□□□□ 0.36
NELFCD-204ENST00000474543 DIAPH3Q9NSV4 1193 aa17.28■□□□□ 0.36
NELFCD-204ENST00000474543 OVOS2A0A0G2JMS6 1433 aa17.28■□□□□ 0.36
NELFCD-204ENST00000474543 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
NELFCD-204ENST00000474543 PTMAP06454 111 aaKnown RBP17.28■□□□□ 0.36
NELFCD-204ENST00000474543 UBE2HP62256 183 aa17.28■□□□□ 0.36
NELFCD-204ENST00000474543 CLASRPQ8N2M8 674 aaKnown RBP17.28■□□□□ 0.36
NELFCD-204ENST00000474543 MARCH10Q8NA82 808 aaPredicted RBP17.27■□□□□ 0.36
NELFCD-204ENST00000474543 RUFY2Q8WXA3 655 aa17.27■□□□□ 0.36
NELFCD-204ENST00000474543 LETM1O95202 739 aaPredicted RBP17.26■□□□□ 0.35
NELFCD-204ENST00000474543 TEFQ10587 303 aa17.26■□□□□ 0.35
NELFCD-204ENST00000474543 ADCK5Q3MIX3 580 aa17.26■□□□□ 0.35
NELFCD-204ENST00000474543 KCNB2Q92953 911 aa17.26■□□□□ 0.35
NELFCD-204ENST00000474543 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
NELFCD-204ENST00000474543 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.351e-10■■□□□ 13.2
NELFCD-204ENST00000474543 AKAP4Q5JQC9 854 aa17.26■□□□□ 0.35
NELFCD-204ENST00000474543 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
NELFCD-204ENST00000474543 FAM196AQ6ZSG2 479 aa17.26■□□□□ 0.35
NELFCD-204ENST00000474543 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
NELFCD-204ENST00000474543 ATP6V1DQ9Y5K8 247 aa17.26■□□□□ 0.35
NELFCD-204ENST00000474543 GJB2P29033 226 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
NELFCD-204ENST00000474543 ZNF530Q6P9A1 599 aaPredicted RBP17.25■□□□□ 0.35
NELFCD-204ENST00000474543 MPRIPQ6WCQ1 1025 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 CCDC83Q8IWF9 413 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 JAKMIP1Q96N16 626 aaKnown RBP17.25■□□□□ 0.35
NELFCD-204ENST00000474543 TM6SF1Q9BZW5 370 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 ZSWIM6Q9HCJ5 1215 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 PDRG1Q9NUG6 133 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 ALDH1L1O75891 902 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 UQCRHP07919 91 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 TPRNQ4KMQ1 711 aa17.25■□□□□ 0.35
NELFCD-204ENST00000474543 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
NELFCD-204ENST00000474543 PA2G4Q9UQ80 394 aaKnown RBP17.25■□□□□ 0.35
NELFCD-204ENST00000474543 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
NELFCD-204ENST00000474543 FIBPO43427 364 aa17.24■□□□□ 0.35
NELFCD-204ENST00000474543 RBM10P98175 930 aaKnown RBP17.24■□□□□ 0.35
NELFCD-204ENST00000474543 ZSCAN31Q96LW9 406 aaPredicted RBP17.24■□□□□ 0.35
NELFCD-204ENST00000474543 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
NELFCD-204ENST00000474543 MTMR6Q9Y217 621 aa17.24■□□□□ 0.35
NELFCD-204ENST00000474543 IFIT2P09913 472 aaKnown RBP17.23■□□□□ 0.35
NELFCD-204ENST00000474543 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
NELFCD-204ENST00000474543 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 NECTIN1Q15223 517 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms