RNA–Protein interactions for RNA: ENST00000474393.5

TMCO3-207, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2 BASIC

Gene TMCO3, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-207ENST00000474393 PDCL2Q8N4E4 241 aa18.01■□□□□ 0.47
TMCO3-207ENST00000474393 COL5A2P05997 1499 aaPredicted RBP18.01■□□□□ 0.47
TMCO3-207ENST00000474393 ZBTB22O15209 634 aa18.01■□□□□ 0.47
TMCO3-207ENST00000474393 FIBPO43427 364 aa18.01■□□□□ 0.47
TMCO3-207ENST00000474393 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
TMCO3-207ENST00000474393 CABP4P57796 275 aa18■□□□□ 0.47
TMCO3-207ENST00000474393 MAP4K4O95819 1239 aaPredicted RBP18■□□□□ 0.47
TMCO3-207ENST00000474393 NAA30Q147X3 362 aaPredicted RBP18■□□□□ 0.47
TMCO3-207ENST00000474393 PPP1R42Q7Z4L9 355 aa18■□□□□ 0.47
TMCO3-207ENST00000474393 ABCA3Q99758 1704 aa18■□□□□ 0.47
TMCO3-207ENST00000474393 MRC1P22897 1456 aa18■□□□□ 0.47
TMCO3-207ENST00000474393 AIMP1Q12904 312 aaKnown RBP17.99■□□□□ 0.47
TMCO3-207ENST00000474393 SSH3Q8TE77 659 aa17.99■□□□□ 0.47
TMCO3-207ENST00000474393 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
TMCO3-207ENST00000474393 DDX58O95786 925 aaKnown RBP17.99■□□□□ 0.47
TMCO3-207ENST00000474393 SYAP1Q96A49 352 aaPredicted RBP17.99■□□□□ 0.47
TMCO3-207ENST00000474393 C5P01031 1676 aa17.99■□□□□ 0.47
TMCO3-207ENST00000474393 NHSL1Q5SYE7 1610 aa17.99■□□□□ 0.47
TMCO3-207ENST00000474393 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
TMCO3-207ENST00000474393 PDIA6Q15084 440 aa17.99■□□□□ 0.47
TMCO3-207ENST00000474393 ZCRB1Q8TBF4 217 aaKnown RBP17.99■□□□□ 0.47
TMCO3-207ENST00000474393 IL25Q9H293 177 aa17.99■□□□□ 0.47
TMCO3-207ENST00000474393 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
TMCO3-207ENST00000474393 PDE1AP54750 535 aa17.98■□□□□ 0.47
TMCO3-207ENST00000474393 PRIMPOLQ96LW4 560 aa17.98■□□□□ 0.47
TMCO3-207ENST00000474393 PARP4Q9UKK3 1724 aaKnown RBP17.98■□□□□ 0.47
TMCO3-207ENST00000474393 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
TMCO3-207ENST00000474393 KCNF1Q9H3M0 494 aa17.98■□□□□ 0.47
TMCO3-207ENST00000474393 C9orf78Q9NZ63 289 aaPredicted RBP17.98■□□□□ 0.47
TMCO3-207ENST00000474393 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
TMCO3-207ENST00000474393 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
TMCO3-207ENST00000474393 SRGAP3O43295 1099 aa17.97■□□□□ 0.47
TMCO3-207ENST00000474393 MYL6BP14649 208 aa17.97■□□□□ 0.47
TMCO3-207ENST00000474393 EVA1CP58658 441 aa17.97■□□□□ 0.47
TMCO3-207ENST00000474393 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
TMCO3-207ENST00000474393 HMGN5P82970 282 aaKnown RBP17.97■□□□□ 0.47
TMCO3-207ENST00000474393 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
TMCO3-207ENST00000474393 CARD10Q9BWT7 1032 aa17.97■□□□□ 0.47
TMCO3-207ENST00000474393 OSBPL3Q9H4L5 887 aa17.97■□□□□ 0.47
TMCO3-207ENST00000474393 SURF6O75683 361 aaKnown RBP17.96■□□□□ 0.47
TMCO3-207ENST00000474393 POLA2Q14181 598 aa17.96■□□□□ 0.47
TMCO3-207ENST00000474393 CWF19L2Q2TBE0 894 aaKnown RBP17.96■□□□□ 0.47
TMCO3-207ENST00000474393 UNC5CLQ8IV45 518 aa17.96■□□□□ 0.47
TMCO3-207ENST00000474393 IL2RBP14784 551 aa17.96■□□□□ 0.47
TMCO3-207ENST00000474393 CPA1P15085 419 aa17.96■□□□□ 0.47
TMCO3-207ENST00000474393 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
TMCO3-207ENST00000474393 BBXQ8WY36 941 aaPredicted RBP17.96■□□□□ 0.47
TMCO3-207ENST00000474393 RIC3Q7Z5B4 369 aa17.95■□□□□ 0.46
TMCO3-207ENST00000474393 LINS1Q8NG48 757 aa17.95■□□□□ 0.46
TMCO3-207ENST00000474393 CGNQ9P2M7 1197 aaKnown RBP17.95■□□□□ 0.46
TMCO3-207ENST00000474393 USP16Q9Y5T5 823 aa17.95■□□□□ 0.46
TMCO3-207ENST00000474393 MX1P20591 662 aa17.94■□□□□ 0.46
TMCO3-207ENST00000474393 DDX54Q8TDD1 881 aaKnown RBP17.94■□□□□ 0.46
TMCO3-207ENST00000474393 SALL3Q9BXA9 1300 aa17.94■□□□□ 0.46
TMCO3-207ENST00000474393 FGD1P98174 961 aa17.94■□□□□ 0.46
TMCO3-207ENST00000474393 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
TMCO3-207ENST00000474393 ESYT1Q9BSJ8 1104 aa17.94■□□□□ 0.46
TMCO3-207ENST00000474393 RAB11FIP3O75154 756 aa17.94■□□□□ 0.46
TMCO3-207ENST00000474393 IL1RAPL2Q9NP60 686 aa17.94■□□□□ 0.46
TMCO3-207ENST00000474393 KDM4AO75164 1064 aa17.93■□□□□ 0.46
TMCO3-207ENST00000474393 PHF14O94880 888 aa17.93■□□□□ 0.46
TMCO3-207ENST00000474393 ZNF771Q7L3S4 317 aaPredicted RBP17.93■□□□□ 0.46
TMCO3-207ENST00000474393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.93■□□□□ 0.46
TMCO3-207ENST00000474393 COPS6Q7L5N1 327 aa17.93■□□□□ 0.46
TMCO3-207ENST00000474393 HDAC5Q9UQL6 1122 aa17.93■□□□□ 0.46
TMCO3-207ENST00000474393 VGLL3A8MV65 326 aa17.92■□□□□ 0.46
TMCO3-207ENST00000474393 CCDC183Q5T5S1 534 aa17.92■□□□□ 0.46
TMCO3-207ENST00000474393 C16orf45Q96MC5 204 aaPredicted RBP17.92■□□□□ 0.46
TMCO3-207ENST00000474393 TCHHQ07283 1943 aa17.92■□□□□ 0.46
TMCO3-207ENST00000474393 GTF2F1P35269 517 aaKnown RBP eCLIP17.92■□□□□ 0.46
TMCO3-207ENST00000474393 PIP4K2AP48426 406 aaPredicted RBP17.92■□□□□ 0.46
TMCO3-207ENST00000474393 LRMPQ12912 555 aa17.92■□□□□ 0.46
TMCO3-207ENST00000474393 CUL4AQ13619 759 aa17.92■□□□□ 0.46
TMCO3-207ENST00000474393 CAMK4Q16566 473 aa17.92■□□□□ 0.46
TMCO3-207ENST00000474393 GRM8O00222 908 aa17.91■□□□□ 0.46
TMCO3-207ENST00000474393 PTGS1P23219 599 aa17.91■□□□□ 0.46
TMCO3-207ENST00000474393 NEXNQ0ZGT2 675 aa17.91■□□□□ 0.46
TMCO3-207ENST00000474393 RHPN1Q8TCX5 695 aa17.91■□□□□ 0.46
TMCO3-207ENST00000474393 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
TMCO3-207ENST00000474393 MTX1Q13505 466 aa17.9■□□□□ 0.46
TMCO3-207ENST00000474393 KIAA1524Q8TCG1 905 aa17.9■□□□□ 0.46
TMCO3-207ENST00000474393 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
TMCO3-207ENST00000474393 CHAF1AQ13111 956 aaPredicted RBP17.9■□□□□ 0.46
TMCO3-207ENST00000474393 GTPBP4Q9BZE4 634 aaKnown RBP17.9■□□□□ 0.46
TMCO3-207ENST00000474393 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
TMCO3-207ENST00000474393 HSP90AB4PQ58FF6 505 aa17.9■□□□□ 0.46
TMCO3-207ENST00000474393 SPTLC3Q9NUV7 552 aa17.9■□□□□ 0.46
TMCO3-207ENST00000474393 STAP2Q9UGK3 403 aa17.9■□□□□ 0.46
TMCO3-207ENST00000474393 OS9Q13438 667 aaPredicted RBP17.89■□□□□ 0.45
TMCO3-207ENST00000474393 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.45
TMCO3-207ENST00000474393 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.89■□□□□ 0.45
TMCO3-207ENST00000474393 NRBP1Q9UHY1 535 aa17.89■□□□□ 0.45
TMCO3-207ENST00000474393 V9GYY5 206 aaPredicted RBP17.89■□□□□ 0.45
TMCO3-207ENST00000474393 WDR33Q9C0J8 1336 aaKnown RBP17.89■□□□□ 0.45
TMCO3-207ENST00000474393 MCCP23508 829 aa17.89■□□□□ 0.45
TMCO3-207ENST00000474393 DNM1Q05193 864 aaKnown RBP17.89■□□□□ 0.45
TMCO3-207ENST00000474393 ANKRD13DQ6ZTN6 518 aa17.89■□□□□ 0.45
TMCO3-207ENST00000474393 LRP10Q7Z4F1 713 aa17.89■□□□□ 0.45
TMCO3-207ENST00000474393 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.45
TMCO3-207ENST00000474393 MYD88Q99836 296 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms