RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 MSL1Q68DK7 614 aa25.48■■□□□ 1.67
CDHR3-210ENST00000474330 FHDC1Q9C0D6 1143 aaPredicted RBP25.48■■□□□ 1.67
CDHR3-210ENST00000474330 LRRFIP2Q9Y608 721 aaKnown RBP25.48■■□□□ 1.67
CDHR3-210ENST00000474330 COL15A1P39059 1388 aa25.47■■□□□ 1.67
CDHR3-210ENST00000474330 ERVV-1B6SEH8 477 aa25.47■■□□□ 1.67
CDHR3-210ENST00000474330 TCIRG1Q13488 830 aa25.47■■□□□ 1.67
CDHR3-210ENST00000474330 GIGYF2Q6Y7W6 1299 aaKnown RBP25.47■■□□□ 1.67
CDHR3-210ENST00000474330 DZIP3Q86Y13 1208 aaKnown RBP25.47■■□□□ 1.67
CDHR3-210ENST00000474330 SMC5Q8IY18 1101 aa25.47■■□□□ 1.67
CDHR3-210ENST00000474330 PELP1Q8IZL8 1130 aaKnown RBP25.47■■□□□ 1.67
CDHR3-210ENST00000474330 ATP5J2-PTCD1G3V325 749 aa25.46■■□□□ 1.67
CDHR3-210ENST00000474330 RPS6KA4O75676 772 aa25.46■■□□□ 1.67
CDHR3-210ENST00000474330 SYT17Q9BSW7 474 aa25.46■■□□□ 1.67
CDHR3-210ENST00000474330 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
CDHR3-210ENST00000474330 BCORQ6W2J9 1755 aa25.46■■□□□ 1.67
CDHR3-210ENST00000474330 NUP98P52948 1817 aa25.46■■□□□ 1.67
CDHR3-210ENST00000474330 ISCA1Q9BUE6 129 aa25.45■■□□□ 1.67
CDHR3-210ENST00000474330 ATP8B2P98198 1209 aa25.45■■□□□ 1.66
CDHR3-210ENST00000474330 TRIM28Q13263 835 aaKnown RBP25.45■■□□□ 1.66
CDHR3-210ENST00000474330 CCDC191Q8NCU4 936 aa25.45■■□□□ 1.66
CDHR3-210ENST00000474330 TBC1D2BQ9UPU7 963 aa25.45■■□□□ 1.66
CDHR3-210ENST00000474330 RTCBQ9Y3I0 505 aaKnown RBP25.45■■□□□ 1.66
CDHR3-210ENST00000474330 ANKRD36CQ5JPF3 1778 aa25.44■■□□□ 1.66
CDHR3-210ENST00000474330 POLD1P28340 1107 aa25.44■■□□□ 1.66
CDHR3-210ENST00000474330 HSP90AB3PQ58FF7 597 aa25.44■■□□□ 1.66
CDHR3-210ENST00000474330 HMMRO75330 724 aa25.43■■□□□ 1.66
CDHR3-210ENST00000474330 HLFQ16534 295 aa25.43■■□□□ 1.66
CDHR3-210ENST00000474330 ARHGEF1Q92888 912 aaKnown RBP25.43■■□□□ 1.66
CDHR3-210ENST00000474330 GCC1Q96CN9 775 aa25.43■■□□□ 1.66
CDHR3-210ENST00000474330 CWC25Q9NXE8 425 aaPredicted RBP25.43■■□□□ 1.66
CDHR3-210ENST00000474330 SCN7AQ01118 1682 aa25.42■■□□□ 1.66
CDHR3-210ENST00000474330 A0A087WZG4 1122 aa25.42■■□□□ 1.66
CDHR3-210ENST00000474330 TRAPPC3LQ5T215 181 aa25.42■■□□□ 1.66
CDHR3-210ENST00000474330 DCTPP1Q9H773 170 aa25.41■■□□□ 1.66
CDHR3-210ENST00000474330 H7C1W4 665 aa25.4■■□□□ 1.66
CDHR3-210ENST00000474330 ADRA2BP18089 450 aa25.39■■□□□ 1.66
CDHR3-210ENST00000474330 MTX1Q13505 466 aa25.39■■□□□ 1.66
CDHR3-210ENST00000474330 SUCLG2Q96I99 432 aa25.39■■□□□ 1.66
CDHR3-210ENST00000474330 CAMTA2O94983 1202 aa25.38■■□□□ 1.65
CDHR3-210ENST00000474330 CASP7P55210 303 aa25.38■■□□□ 1.65
CDHR3-210ENST00000474330 KAZALD1Q96I82 304 aa25.38■■□□□ 1.65
CDHR3-210ENST00000474330 PDZRN3Q9UPQ7 1066 aa25.38■■□□□ 1.65
CDHR3-210ENST00000474330 PNMA6EA0A0J9YXQ4 647 aa25.37■■□□□ 1.65
CDHR3-210ENST00000474330 RGL2O15211 777 aa25.37■■□□□ 1.65
CDHR3-210ENST00000474330 UBE3BQ7Z3V4 1068 aa25.37■■□□□ 1.65
CDHR3-210ENST00000474330 PPP1R42Q7Z4L9 355 aa25.37■■□□□ 1.65
CDHR3-210ENST00000474330 SSH3Q8TE77 659 aa25.37■■□□□ 1.65
CDHR3-210ENST00000474330 ZNF34Q8IZ26 560 aa25.36■■□□□ 1.65
CDHR3-210ENST00000474330 POLA2Q14181 598 aa25.35■■□□□ 1.65
CDHR3-210ENST00000474330 GYS1P13807 737 aa25.34■■□□□ 1.65
CDHR3-210ENST00000474330 RFC4P35249 363 aa25.34■■□□□ 1.65
CDHR3-210ENST00000474330 NUCB1Q02818 461 aa25.34■■□□□ 1.65
CDHR3-210ENST00000474330 NLRP10Q86W26 655 aa25.34■■□□□ 1.65
CDHR3-210ENST00000474330 BICC1Q9H694 974 aaKnown RBP25.34■■□□□ 1.65
CDHR3-210ENST00000474330 NARFQ9UHQ1 456 aa25.34■■□□□ 1.65
CDHR3-210ENST00000474330 CLEC4GQ6UXB4 293 aa25.34■■□□□ 1.65
CDHR3-210ENST00000474330 SKAP1Q86WV1 359 aa25.34■■□□□ 1.65
CDHR3-210ENST00000474330 SRGAP3O43295 1099 aa25.33■■□□□ 1.65
CDHR3-210ENST00000474330 PCCAP05165 728 aaPredicted RBP25.33■■□□□ 1.65
CDHR3-210ENST00000474330 JARID2Q92833 1246 aaPredicted RBP25.33■■□□□ 1.65
CDHR3-210ENST00000474330 ZNF652Q9Y2D9 606 aa25.33■■□□□ 1.65
CDHR3-210ENST00000474330 ZPR1O75312 459 aa25.32■■□□□ 1.64
CDHR3-210ENST00000474330 GPTP24298 496 aa25.32■■□□□ 1.64
CDHR3-210ENST00000474330 KLHL34Q8N239 644 aa25.32■■□□□ 1.64
CDHR3-210ENST00000474330 NLGN2Q8NFZ4 835 aa25.32■■□□□ 1.64
CDHR3-210ENST00000474330 SRP68Q9UHB9 627 aaKnown RBP25.32■■□□□ 1.64
CDHR3-210ENST00000474330 ZBTB38Q8NAP3 1195 aaPredicted RBP25.31■■□□□ 1.64
CDHR3-210ENST00000474330 USP42Q9H9J4 1324 aaKnown RBP25.31■■□□□ 1.64
CDHR3-210ENST00000474330 RABL6Q3YEC7 729 aaPredicted RBP25.3■■□□□ 1.64
CDHR3-210ENST00000474330 EPHA10Q5JZY3 1008 aa25.3■■□□□ 1.64
CDHR3-210ENST00000474330 ANKRD45Q5TZF3 282 aa25.3■■□□□ 1.64
CDHR3-210ENST00000474330 CHD1LQ86WJ1 897 aa25.3■■□□□ 1.64
CDHR3-210ENST00000474330 UBN2Q6ZU65 1347 aa25.3■■□□□ 1.64
CDHR3-210ENST00000474330 USPL1Q5W0Q7 1092 aa25.3■■□□□ 1.64
CDHR3-210ENST00000474330 NLGN1Q8N2Q7 840 aa25.3■■□□□ 1.64
CDHR3-210ENST00000474330 MMP10P09238 476 aa25.29■■□□□ 1.64
CDHR3-210ENST00000474330 PARP10Q53GL7 1025 aa25.29■■□□□ 1.64
CDHR3-210ENST00000474330 CDHR2Q9BYE9 1310 aa25.28■■□□□ 1.64
CDHR3-210ENST00000474330 RGS3P49796 1198 aa25.27■■□□□ 1.64
CDHR3-210ENST00000474330 FOXO4P98177 505 aa25.27■■□□□ 1.64
CDHR3-210ENST00000474330 RTL5Q5HYW3 569 aaPredicted RBP25.27■■□□□ 1.64
CDHR3-210ENST00000474330 FAM89AQ96GI7 184 aa25.26■■□□□ 1.63
CDHR3-210ENST00000474330 PLA2G12BQ9BX93 195 aa25.26■■□□□ 1.63
CDHR3-210ENST00000474330 BCL2L12Q9HB09 334 aa25.26■■□□□ 1.63
CDHR3-210ENST00000474330 EXOC6BQ9Y2D4 811 aa25.26■■□□□ 1.63
CDHR3-210ENST00000474330 CD2APQ9Y5K6 639 aa25.26■■□□□ 1.63
CDHR3-210ENST00000474330 LNPKQ9C0E8 428 aa25.26■■□□□ 1.63
CDHR3-210ENST00000474330 TRMT112Q9UI30 125 aaKnown RBP25.26■■□□□ 1.63
CDHR3-210ENST00000474330 NIP7Q9Y221 180 aaKnown RBP eCLIP25.26■■□□□ 1.63
CDHR3-210ENST00000474330 NOP58Q9Y2X3 529 aaKnown RBP25.26■■□□□ 1.63
CDHR3-210ENST00000474330 SUSD4Q5VX71 490 aa25.25■■□□□ 1.63
CDHR3-210ENST00000474330 SURF6O75683 361 aaKnown RBP25.24■■□□□ 1.63
CDHR3-210ENST00000474330 PDE4AP27815 886 aa25.24■■□□□ 1.63
CDHR3-210ENST00000474330 KIF13BQ9NQT8 1826 aa25.24■■□□□ 1.63
CDHR3-210ENST00000474330 RAB11FIP3O75154 756 aa25.23■■□□□ 1.63
CDHR3-210ENST00000474330 HSP90AB4PQ58FF6 505 aa25.23■■□□□ 1.63
CDHR3-210ENST00000474330 LMBR1LQ6UX01 489 aa25.23■■□□□ 1.63
CDHR3-210ENST00000474330 ZBTB47Q9UFB7 747 aaPredicted RBP25.23■■□□□ 1.63
CDHR3-210ENST00000474330 UTP14AQ9BVJ6 771 aaKnown RBP25.23■■□□□ 1.63
CDHR3-210ENST00000474330 TM4SF1P30408 202 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms