RNA–Protein interactions for RNA: ENST00000474172.1

SETX-204, Transcript of senataxin, humanhuman

TSL 3

Gene SETX, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-204ENST00000474172 POTEAQ6S8J7 498 aa12.52□□□□□ -0.41
SETX-204ENST00000474172 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
SETX-204ENST00000474172 DZIP3Q86Y13 1208 aaKnown RBP12.52□□□□□ -0.41
SETX-204ENST00000474172 IL1RAPL2Q9NP60 686 aa12.52□□□□□ -0.41
SETX-204ENST00000474172 LRRC4BQ9NT99 713 aa12.52□□□□□ -0.41
SETX-204ENST00000474172 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
SETX-204ENST00000474172 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.41
SETX-204ENST00000474172 TUBGCP6Q96RT7 1819 aa12.52□□□□□ -0.41
SETX-204ENST00000474172 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
SETX-204ENST00000474172 TRIM28Q13263 835 aaKnown RBP12.51□□□□□ -0.41
SETX-204ENST00000474172 RABL6Q3YEC7 729 aaPredicted RBP12.51□□□□□ -0.41
SETX-204ENST00000474172 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
SETX-204ENST00000474172 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
SETX-204ENST00000474172 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
SETX-204ENST00000474172 NOP58Q9Y2X3 529 aaKnown RBP12.51□□□□□ -0.41
SETX-204ENST00000474172 SASH1O94885 1247 aa12.5□□□□□ -0.41
SETX-204ENST00000474172 TRIM37O94972 964 aa12.5□□□□□ -0.41
SETX-204ENST00000474172 RBM6P78332 1123 aaKnown RBP12.5□□□□□ -0.41
SETX-204ENST00000474172 ZNF34Q8IZ26 560 aa12.5□□□□□ -0.41
SETX-204ENST00000474172 CCDC191Q8NCU4 936 aa12.5□□□□□ -0.41
SETX-204ENST00000474172 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
SETX-204ENST00000474172 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
SETX-204ENST00000474172 COL15A1P39059 1388 aa12.5□□□□□ -0.41
SETX-204ENST00000474172 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
SETX-204ENST00000474172 PTPN12Q05209 780 aaKnown RBP12.49□□□□□ -0.41
SETX-204ENST00000474172 LMBR1LQ6UX01 489 aa12.49□□□□□ -0.41
SETX-204ENST00000474172 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
SETX-204ENST00000474172 PROM2Q8N271 834 aa12.49□□□□□ -0.41
SETX-204ENST00000474172 RHPN1Q8TCX5 695 aa12.49□□□□□ -0.41
SETX-204ENST00000474172 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
SETX-204ENST00000474172 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
SETX-204ENST00000474172 SUSD4Q5VX71 490 aa12.48□□□□□ -0.41
SETX-204ENST00000474172 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
SETX-204ENST00000474172 LRRCC1Q9C099 1032 aa12.48□□□□□ -0.41
SETX-204ENST00000474172 SIL1Q9H173 461 aa12.48□□□□□ -0.41
SETX-204ENST00000474172 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
SETX-204ENST00000474172 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
SETX-204ENST00000474172 COL4A1P02462 1669 aa12.48□□□□□ -0.41
SETX-204ENST00000474172 CNTNAP4Q9C0A0 1308 aa12.47□□□□□ -0.41
SETX-204ENST00000474172 FAM177BA6PVY3 158 aa12.47□□□□□ -0.41
SETX-204ENST00000474172 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
SETX-204ENST00000474172 PDE1AP54750 535 aa12.47□□□□□ -0.41
SETX-204ENST00000474172 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
SETX-204ENST00000474172 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
SETX-204ENST00000474172 FBXO41Q8TF61 875 aa12.47□□□□□ -0.41
SETX-204ENST00000474172 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
SETX-204ENST00000474172 C4BP0C0L5 1744 aa12.47□□□□□ -0.41
SETX-204ENST00000474172 DDX60Q8IY21 1712 aaKnown RBP12.46□□□□□ -0.41
SETX-204ENST00000474172 RAB11FIP3O75154 756 aa12.46□□□□□ -0.41
SETX-204ENST00000474172 RC3H1Q5TC82 1133 aaKnown RBP12.46□□□□□ -0.41
SETX-204ENST00000474172 FAM196AQ6ZSG2 479 aa12.46□□□□□ -0.41
SETX-204ENST00000474172 PUS3Q9BZE2 481 aaKnown RBP12.46□□□□□ -0.41
SETX-204ENST00000474172 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
SETX-204ENST00000474172 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
SETX-204ENST00000474172 BMP2KLQ5H9B9 411 aa12.45□□□□□ -0.42
SETX-204ENST00000474172 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
SETX-204ENST00000474172 NPM2Q86SE8 214 aaKnown RBP12.45□□□□□ -0.42
SETX-204ENST00000474172 ZBTB38Q8NAP3 1195 aaPredicted RBP12.45□□□□□ -0.42
SETX-204ENST00000474172 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
SETX-204ENST00000474172 TLR7Q9NYK1 1049 aaKnown RBP12.45□□□□□ -0.42
SETX-204ENST00000474172 STAP2Q9UGK3 403 aa12.45□□□□□ -0.42
SETX-204ENST00000474172 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
SETX-204ENST00000474172 CASZ1Q86V15 1759 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 GNPATO15228 680 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 CSF1RP07333 972 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 SDSP20132 328 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 RXRBP28702 533 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 LRRC24Q50LG9 513 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
SETX-204ENST00000474172 KIF1BPQ96EK5 621 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 PLA2G12BQ9BX93 195 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 OSBPL3Q9H4L5 887 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 UBR3Q6ZT12 1888 aa12.44□□□□□ -0.42
SETX-204ENST00000474172 CDHR2Q9BYE9 1310 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 MYH3P11055 1940 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 NTSR2O95665 410 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 HCLS1P14317 486 aaPredicted RBP12.43□□□□□ -0.42
SETX-204ENST00000474172 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
SETX-204ENST00000474172 TFCP2Q12800 502 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 C3orf67Q6ZVT6 689 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 PI4K2BQ8TCG2 481 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
SETX-204ENST00000474172 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
SETX-204ENST00000474172 TRMT112Q9UI30 125 aaKnown RBP12.43□□□□□ -0.42
SETX-204ENST00000474172 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
SETX-204ENST00000474172 EP400Q96L91 3159 aa12.42□□□□□ -0.42
SETX-204ENST00000474172 TAF1P21675 1872 aa12.42□□□□□ -0.42
SETX-204ENST00000474172 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
SETX-204ENST00000474172 MAP4K4O95819 1239 aaPredicted RBP12.42□□□□□ -0.42
SETX-204ENST00000474172 MX1P20591 662 aa12.42□□□□□ -0.42
SETX-204ENST00000474172 G3BP1Q13283 466 aaKnown RBP eCLIP12.42□□□□□ -0.42
SETX-204ENST00000474172 OS9Q13438 667 aaPredicted RBP12.42□□□□□ -0.42
SETX-204ENST00000474172 HSP90AB3PQ58FF7 597 aa12.42□□□□□ -0.42
SETX-204ENST00000474172 TBC1D9Q6ZT07 1266 aa12.42□□□□□ -0.42
SETX-204ENST00000474172 TTLL11Q8NHH1 800 aa12.42□□□□□ -0.42
SETX-204ENST00000474172 GREM2Q9H772 168 aa12.42□□□□□ -0.42
SETX-204ENST00000474172 NIP7Q9Y221 180 aaKnown RBP eCLIP12.42□□□□□ -0.42
SETX-204ENST00000474172 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms