RNA–Protein interactions for RNA: ENST00000474100.1

PSMB4-203, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 755 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-203ENST00000474100 ZNF541Q9H0D2 1346 aa9.75□□□□□ -0.85
PSMB4-203ENST00000474100 ECE1P42892 770 aa9.74□□□□□ -0.85
PSMB4-203ENST00000474100 RGS19P49795 217 aa9.74□□□□□ -0.85
PSMB4-203ENST00000474100 EIF5P55010 431 aaKnown RBP9.74□□□□□ -0.85
PSMB4-203ENST00000474100 VSIG10Q8N0Z9 540 aa9.74□□□□□ -0.85
PSMB4-203ENST00000474100 ZNF277Q9NRM2 450 aaPredicted RBP9.74□□□□□ -0.85
PSMB4-203ENST00000474100 RNF123Q5XPI4 1314 aa9.74□□□□□ -0.85
PSMB4-203ENST00000474100 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
PSMB4-203ENST00000474100 SRGNP10124 158 aa9.73□□□□□ -0.85
PSMB4-203ENST00000474100 FKBP4Q02790 459 aaKnown RBP eCLIP9.73□□□□□ -0.85
PSMB4-203ENST00000474100 CAPNS2Q96L46 248 aa9.73□□□□□ -0.85
PSMB4-203ENST00000474100 TSKSQ9UJT2 592 aa9.73□□□□□ -0.85
PSMB4-203ENST00000474100 ANP32CO43423 234 aa9.72□□□□□ -0.85
PSMB4-203ENST00000474100 CYP4F22Q6NT55 531 aa9.72□□□□□ -0.85
PSMB4-203ENST00000474100 GPR101Q96P66 508 aaPredicted RBP9.72□□□□□ -0.85
PSMB4-203ENST00000474100 DDX21Q9NR30 783 aaKnown RBP eCLIP9.72□□□□□ -0.85
PSMB4-203ENST00000474100 MYBBP1AQ9BQG0 1328 aaKnown RBP9.72□□□□□ -0.85
PSMB4-203ENST00000474100 FER1L6Q2WGJ9 1857 aa9.71□□□□□ -0.85
PSMB4-203ENST00000474100 LMOD1P29536 600 aaPredicted RBP9.71□□□□□ -0.86
PSMB4-203ENST00000474100 NBPF5PQ86XG9 351 aaPredicted RBP9.71□□□□□ -0.86
PSMB4-203ENST00000474100 MARVELD3Q96A59 401 aa9.71□□□□□ -0.86
PSMB4-203ENST00000474100 GJA3Q9Y6H8 435 aa9.71□□□□□ -0.86
PSMB4-203ENST00000474100 DICER1Q9UPY3 1922 aaKnown RBP9.71□□□□□ -0.86
PSMB4-203ENST00000474100 COL11A2P13942 1736 aaPredicted RBP9.7□□□□□ -0.86
PSMB4-203ENST00000474100 HMOX1P09601 288 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 NPR1P16066 1061 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
PSMB4-203ENST00000474100 IARSP41252 1262 aaKnown RBP9.7□□□□□ -0.86
PSMB4-203ENST00000474100 EIF6P56537 245 aaKnown RBP9.7□□□□□ -0.86
PSMB4-203ENST00000474100 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 RTKN2Q8IZC4 609 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 GPC2Q8N158 579 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 JDP2Q8WYK2 163 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 CFAP53Q96M91 514 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 TEX13AQ9BXU3 409 aaPredicted RBP9.7□□□□□ -0.86
PSMB4-203ENST00000474100 MCOLN1Q9GZU1 580 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 SCN4AP35499 1836 aa9.7□□□□□ -0.86
PSMB4-203ENST00000474100 VIRMAQ69YN4 1812 aaKnown RBP9.7□□□□□ -0.86
PSMB4-203ENST00000474100 CAMTA2O94983 1202 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 A1BGP04217 495 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 MRC1P22897 1456 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 TIE1P35590 1138 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 FMR1Q06787 632 aaKnown RBP eCLIP9.69□□□□□ -0.86
PSMB4-203ENST00000474100 TEFQ10587 303 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 DGKZQ13574 1117 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 MTHFSDQ2M296 383 aaKnown RBP9.69□□□□□ -0.86
PSMB4-203ENST00000474100 DIEXFQ68CQ4 756 aaKnown RBP9.69□□□□□ -0.86
PSMB4-203ENST00000474100 OLFM4Q6UX06 510 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 DZIP3Q86Y13 1208 aaKnown RBP9.69□□□□□ -0.86
PSMB4-203ENST00000474100 SYNE4Q8N205 404 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 ANKRD31Q8N7Z5 1873 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 C7orf43Q8WVR3 580 aa9.69□□□□□ -0.86
PSMB4-203ENST00000474100 ZNF496Q96IT1 587 aaPredicted RBP9.69□□□□□ -0.86
PSMB4-203ENST00000474100 SLX4Q8IY92 1834 aa9.68□□□□□ -0.86
PSMB4-203ENST00000474100 SCN11AQ9UI33 1791 aa9.68□□□□□ -0.86
PSMB4-203ENST00000474100 COL3A1P02461 1466 aaPredicted RBP9.68□□□□□ -0.86
PSMB4-203ENST00000474100 FAM177BA6PVY3 158 aa9.68□□□□□ -0.86
PSMB4-203ENST00000474100 FZD9O00144 591 aa9.68□□□□□ -0.86
PSMB4-203ENST00000474100 AOC2O75106 756 aa9.68□□□□□ -0.86
PSMB4-203ENST00000474100 KRTAP3-3Q9BYR6 98 aa9.68□□□□□ -0.86
PSMB4-203ENST00000474100 KRTAP3-2Q9BYR7 98 aa9.68□□□□□ -0.86
PSMB4-203ENST00000474100 HEG1Q9ULI3 1381 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 TRAF5O00463 557 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 U2SURPO15042 1029 aaKnown RBP9.67□□□□□ -0.86
PSMB4-203ENST00000474100 CA12O43570 354 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 MAP2K2P36507 400 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
PSMB4-203ENST00000474100 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 NUDCQ9Y266 331 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 ZNF652Q9Y2D9 606 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 TLL2Q9Y6L7 1015 aa9.67□□□□□ -0.86
PSMB4-203ENST00000474100 SNPHO15079 494 aa9.66□□□□□ -0.86
PSMB4-203ENST00000474100 U2AF1L5P0DN76 240 aaPredicted RBP9.66□□□□□ -0.86
PSMB4-203ENST00000474100 GTF2E1P29083 439 aaPredicted RBP9.66□□□□□ -0.86
PSMB4-203ENST00000474100 ALDH1B1P30837 517 aa9.66□□□□□ -0.86
PSMB4-203ENST00000474100 EPS15P42566 896 aa9.66□□□□□ -0.86
PSMB4-203ENST00000474100 PIP4K2AP48426 406 aaPredicted RBP9.66□□□□□ -0.86
PSMB4-203ENST00000474100 U2AF1Q01081 240 aaKnown RBP eCLIP9.66□□□□□ -0.867e-7■■■■□ 21.2
PSMB4-203ENST00000474100 TPTE2Q6XPS3 522 aa9.66□□□□□ -0.86
PSMB4-203ENST00000474100 SCN7AQ01118 1682 aa9.66□□□□□ -0.86
PSMB4-203ENST00000474100 CELF2O95319 508 aaKnown RBP9.65□□□□□ -0.86
PSMB4-203ENST00000474100 CST9Q5W186 159 aa9.65□□□□□ -0.86
PSMB4-203ENST00000474100 USP50Q70EL3 339 aaPredicted RBP9.65□□□□□ -0.86
PSMB4-203ENST00000474100 LARGE2Q8N3Y3 721 aa9.65□□□□□ -0.86
PSMB4-203ENST00000474100 ZNF408Q9H9D4 720 aa9.65□□□□□ -0.86
PSMB4-203ENST00000474100 NIP7Q9Y221 180 aaKnown RBP eCLIP9.65□□□□□ -0.86
PSMB4-203ENST00000474100 CACNA1SQ13698 1873 aa9.65□□□□□ -0.86
PSMB4-203ENST00000474100 ADAMTSL1Q8N6G6 1762 aa9.65□□□□□ -0.87
PSMB4-203ENST00000474100 SCNN1DP51172 638 aa9.64□□□□□ -0.87
PSMB4-203ENST00000474100 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
PSMB4-203ENST00000474100 IER5LQ5T953 404 aa9.64□□□□□ -0.87
PSMB4-203ENST00000474100 CLEC4GQ6UXB4 293 aa9.64□□□□□ -0.87
PSMB4-203ENST00000474100 MIER1Q8N108 512 aa9.64□□□□□ -0.87
PSMB4-203ENST00000474100 PNISRQ8TF01 805 aaKnown RBP9.64□□□□□ -0.87
PSMB4-203ENST00000474100 PSMD1Q99460 953 aa9.64□□□□□ -0.87
PSMB4-203ENST00000474100 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
PSMB4-203ENST00000474100 ADAMTS8Q9UP79 889 aa9.64□□□□□ -0.87
PSMB4-203ENST00000474100 TRPC6Q9Y210 931 aa9.64□□□□□ -0.87
PSMB4-203ENST00000474100 GNAT3A8MTJ3 354 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms