RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 ATP4AP20648 1035 aa11.82□□□□□ -0.52
A1CF-209ENST00000473480 FAM200AQ8TCP9 573 aa11.82□□□□□ -0.52
A1CF-209ENST00000473480 TRERF1Q96PN7 1200 aa11.82□□□□□ -0.52
A1CF-209ENST00000473480 SIGLEC1Q9BZZ2 1709 aa11.81□□□□□ -0.52
A1CF-209ENST00000473480 SRPK2P78362 688 aaKnown RBP11.81□□□□□ -0.52
A1CF-209ENST00000473480 CNTNAP3BQ96NU0 1288 aa11.81□□□□□ -0.52
A1CF-209ENST00000473480 CNTNAP3Q9BZ76 1288 aa11.81□□□□□ -0.52
A1CF-209ENST00000473480 NOVA2Q9UNW9 492 aaKnown RBP11.81□□□□□ -0.52
A1CF-209ENST00000473480 ARHGEF12Q9NZN5 1544 aa11.81□□□□□ -0.52
A1CF-209ENST00000473480 ABCA9Q8IUA7 1624 aa11.8□□□□□ -0.52
A1CF-209ENST00000473480 KRT76Q01546 638 aa11.8□□□□□ -0.52
A1CF-209ENST00000473480 ELOAQ14241 798 aaKnown RBP11.8□□□□□ -0.52
A1CF-209ENST00000473480 ARSJQ5FYB0 599 aaPredicted RBP11.8□□□□□ -0.52
A1CF-209ENST00000473480 RNFT1Q5M7Z0 435 aa11.8□□□□□ -0.52
A1CF-209ENST00000473480 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
A1CF-209ENST00000473480 PBXIP1Q96AQ6 731 aa11.8□□□□□ -0.52
A1CF-209ENST00000473480 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
A1CF-209ENST00000473480 DENND4BO75064 1496 aaPredicted RBP11.8□□□□□ -0.52
A1CF-209ENST00000473480 GPR25O00155 361 aa11.79□□□□□ -0.52
A1CF-209ENST00000473480 PPP1R12BO60237 982 aaPredicted RBP11.79□□□□□ -0.52
A1CF-209ENST00000473480 THBS1P07996 1170 aa11.79□□□□□ -0.52
A1CF-209ENST00000473480 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
A1CF-209ENST00000473480 EFCAB5A4FU69 1503 aa11.78□□□□□ -0.52
A1CF-209ENST00000473480 ZFYVE16Q7Z3T8 1539 aa11.78□□□□□ -0.52
A1CF-209ENST00000473480 EML1O00423 815 aa11.78□□□□□ -0.52
A1CF-209ENST00000473480 TXLNAP40222 546 aa11.78□□□□□ -0.52
A1CF-209ENST00000473480 HIRAP54198 1017 aaPredicted RBP11.78□□□□□ -0.52
A1CF-209ENST00000473480 POTEAQ6S8J7 498 aa11.78□□□□□ -0.52
A1CF-209ENST00000473480 NLRP8Q86W28 1048 aa11.78□□□□□ -0.52
A1CF-209ENST00000473480 SCG3Q8WXD2 468 aaKnown RBP11.78□□□□□ -0.52
A1CF-209ENST00000473480 FHOD3Q2V2M9 1422 aa11.77□□□□□ -0.52
A1CF-209ENST00000473480 RICTORQ6R327 1708 aa11.77□□□□□ -0.52
A1CF-209ENST00000473480 C21orf2O43822 256 aa11.77□□□□□ -0.53
A1CF-209ENST00000473480 ATG7O95352 703 aa11.77□□□□□ -0.53
A1CF-209ENST00000473480 GAS6Q14393 721 aa11.77□□□□□ -0.53
A1CF-209ENST00000473480 FIGNL1Q6PIW4 674 aa11.77□□□□□ -0.53
A1CF-209ENST00000473480 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.53
A1CF-209ENST00000473480 PHF24Q9UPV7 400 aa11.77□□□□□ -0.53
A1CF-209ENST00000473480 KIAA0556O60303 1618 aa11.77□□□□□ -0.53
A1CF-209ENST00000473480 A0A1W2PNR3 127 aa11.76□□□□□ -0.53
A1CF-209ENST00000473480 BICDL1Q6ZP65 573 aa11.76□□□□□ -0.53
A1CF-209ENST00000473480 CFHR5Q9BXR6 569 aa11.76□□□□□ -0.53
A1CF-209ENST00000473480 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
A1CF-209ENST00000473480 MAGI2Q86UL8 1455 aa11.76□□□□□ -0.53
A1CF-209ENST00000473480 UBAP2LQ14157 1087 aaKnown RBP11.75□□□□□ -0.53
A1CF-209ENST00000473480 SH3PXD2AQ5TCZ1 1133 aa11.75□□□□□ -0.53
A1CF-209ENST00000473480 ZSCAN1Q8NBB4 408 aa11.75□□□□□ -0.53
A1CF-209ENST00000473480 ZIC5Q96T25 663 aa11.75□□□□□ -0.53
A1CF-209ENST00000473480 ZMIZ1Q9ULJ6 1067 aa11.75□□□□□ -0.53
A1CF-209ENST00000473480 GPC6Q9Y625 555 aaPredicted RBP11.75□□□□□ -0.53
A1CF-209ENST00000473480 UGGT2Q9NYU1 1516 aa11.75□□□□□ -0.53
A1CF-209ENST00000473480 IGFBP4P22692 258 aa11.74□□□□□ -0.53
A1CF-209ENST00000473480 C1orf53Q5VUE5 145 aa11.74□□□□□ -0.53
A1CF-209ENST00000473480 C2orf49Q9BVC5 232 aaPredicted RBP11.74□□□□□ -0.53
A1CF-209ENST00000473480 MBIPQ9NS73 344 aa11.74□□□□□ -0.53
A1CF-209ENST00000473480 GJA3Q9Y6H8 435 aa11.74□□□□□ -0.53
A1CF-209ENST00000473480 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
A1CF-209ENST00000473480 CAMSAP1Q5T5Y3 1602 aa11.74□□□□□ -0.53
A1CF-209ENST00000473480 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
A1CF-209ENST00000473480 LGR5O75473 907 aa11.73□□□□□ -0.53
A1CF-209ENST00000473480 SRSF11Q05519 484 aaKnown RBP11.73□□□□□ -0.53
A1CF-209ENST00000473480 SWI5Q1ZZU3 235 aa11.73□□□□□ -0.53
A1CF-209ENST00000473480 ZMYM4Q5VZL5 1548 aa11.73□□□□□ -0.53
A1CF-209ENST00000473480 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
A1CF-209ENST00000473480 ATXN7L1Q9ULK2 861 aaPredicted RBP11.73□□□□□ -0.53
A1CF-209ENST00000473480 PCDHGC4Q9Y5F7 938 aa11.73□□□□□ -0.53
A1CF-209ENST00000473480 PTPRKQ15262 1439 aa11.72□□□□□ -0.53
A1CF-209ENST00000473480 TRAPPC8Q9Y2L5 1435 aa11.72□□□□□ -0.53
A1CF-209ENST00000473480 ZCCHC2Q9C0B9 1178 aaKnown RBP11.72□□□□□ -0.53
A1CF-209ENST00000473480 HCN4Q9Y3Q4 1203 aa11.72□□□□□ -0.53
A1CF-209ENST00000473480 ABCA8O94911 1581 aa11.71□□□□□ -0.53
A1CF-209ENST00000473480 SLURP2P0DP57 97 aa11.71□□□□□ -0.53
A1CF-209ENST00000473480 MX2P20592 715 aa11.71□□□□□ -0.53
A1CF-209ENST00000473480 WEE1P30291 646 aa11.71□□□□□ -0.53
A1CF-209ENST00000473480 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.53
A1CF-209ENST00000473480 STK32AQ8WU08 396 aa11.71□□□□□ -0.53
A1CF-209ENST00000473480 PHACTR1Q9C0D0 580 aa11.71□□□□□ -0.53
A1CF-209ENST00000473480 NEUROD4Q9HD90 331 aa11.71□□□□□ -0.53
A1CF-209ENST00000473480 NSFL1CQ9UNZ2 370 aaKnown RBP11.71□□□□□ -0.53
A1CF-209ENST00000473480 SETD1AO15047 1707 aaKnown RBP11.71□□□□□ -0.54
A1CF-209ENST00000473480 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
A1CF-209ENST00000473480 ATXN7O15265 892 aaPredicted RBP11.7□□□□□ -0.54
A1CF-209ENST00000473480 BNIP3LO60238 219 aa11.7□□□□□ -0.54
A1CF-209ENST00000473480 PPP1R15AO75807 674 aaPredicted RBP11.7□□□□□ -0.54
A1CF-209ENST00000473480 LORP23490 312 aaPredicted RBP11.7□□□□□ -0.54
A1CF-209ENST00000473480 C7orf43Q8WVR3 580 aa11.7□□□□□ -0.54
A1CF-209ENST00000473480 ABHD17AQ96GS6 310 aa11.7□□□□□ -0.54
A1CF-209ENST00000473480 NDFIP2Q9NV92 336 aa11.7□□□□□ -0.54
A1CF-209ENST00000473480 ADAMTS2O95450 1211 aa11.69□□□□□ -0.54
A1CF-209ENST00000473480 STK17AQ9UEE5 414 aa11.69□□□□□ -0.54
A1CF-209ENST00000473480 ATP10AO60312 1499 aa11.69□□□□□ -0.54
A1CF-209ENST00000473480 FOXO3O43524 673 aa11.68□□□□□ -0.54
A1CF-209ENST00000473480 SAMD5Q5TGI4 173 aa11.68□□□□□ -0.54
A1CF-209ENST00000473480 ALDH16A1Q8IZ83 802 aa11.68□□□□□ -0.54
A1CF-209ENST00000473480 C3P01024 1663 aa11.68□□□□□ -0.54
A1CF-209ENST00000473480 FAM181BA6NEQ2 426 aa11.67□□□□□ -0.54
A1CF-209ENST00000473480 FGFR3P22607 806 aa11.67□□□□□ -0.54
A1CF-209ENST00000473480 TMEM164Q5U3C3 297 aa11.67□□□□□ -0.54
A1CF-209ENST00000473480 LRRC69Q6ZNQ3 347 aa11.67□□□□□ -0.54
A1CF-209ENST00000473480 FAM9AQ8IZU1 332 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms