RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 WDR33Q9C0J8 1336 aaKnown RBP16.86■□□□□ 0.29
TRAF4-209ENST00000473421 NUP98P52948 1817 aa16.86■□□□□ 0.29
TRAF4-209ENST00000473421 SUSD4Q5VX71 490 aa16.85■□□□□ 0.29
TRAF4-209ENST00000473421 CST9Q5W186 159 aa16.85■□□□□ 0.29
TRAF4-209ENST00000473421 AIDAQ96BJ3 306 aa16.85■□□□□ 0.29
TRAF4-209ENST00000473421 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
TRAF4-209ENST00000473421 PSMD1Q99460 953 aa16.85■□□□□ 0.29
TRAF4-209ENST00000473421 DDX21Q9NR30 783 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRAF4-209ENST00000473421 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
TRAF4-209ENST00000473421 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-209ENST00000473421 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-209ENST00000473421 ABT1Q9ULW3 272 aaKnown RBP16.84■□□□□ 0.29
TRAF4-209ENST00000473421 LAMB4A4D0S4 1761 aa16.83■□□□□ 0.28
TRAF4-209ENST00000473421 RGL2O15211 777 aa16.83■□□□□ 0.28
TRAF4-209ENST00000473421 MYL6BP14649 208 aa16.83■□□□□ 0.28
TRAF4-209ENST00000473421 HOXA10P31260 410 aaPredicted RBP16.83■□□□□ 0.28
TRAF4-209ENST00000473421 MAP3K15Q6ZN16 1313 aa16.83■□□□□ 0.28
TRAF4-209ENST00000473421 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
TRAF4-209ENST00000473421 ZBTB3Q9H5J0 574 aa16.83■□□□□ 0.28
TRAF4-209ENST00000473421 NUDCQ9Y266 331 aa16.83■□□□□ 0.28
TRAF4-209ENST00000473421 DLG5Q8TDM6 1919 aa16.82■□□□□ 0.28
TRAF4-209ENST00000473421 EIF4A1P60842 406 aaKnown RBP16.82■□□□□ 0.28
TRAF4-209ENST00000473421 CYP4F22Q6NT55 531 aa16.82■□□□□ 0.28
TRAF4-209ENST00000473421 JDP2Q8WYK2 163 aa16.82■□□□□ 0.28
TRAF4-209ENST00000473421 TSKSQ9UJT2 592 aa16.82■□□□□ 0.28
TRAF4-209ENST00000473421 KDM3BQ7LBC6 1761 aa16.82■□□□□ 0.28
TRAF4-209ENST00000473421 ERVV-1B6SEH8 477 aa16.81■□□□□ 0.28
TRAF4-209ENST00000473421 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
TRAF4-209ENST00000473421 GRM1Q13255 1194 aa16.81■□□□□ 0.28
TRAF4-209ENST00000473421 LARGE2Q8N3Y3 721 aa16.81■□□□□ 0.28
TRAF4-209ENST00000473421 NTSR2O95665 410 aa16.8■□□□□ 0.28
TRAF4-209ENST00000473421 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
TRAF4-209ENST00000473421 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
TRAF4-209ENST00000473421 RPGRQ92834 1020 aaKnown RBP16.8■□□□□ 0.28
TRAF4-209ENST00000473421 CAPNS2Q96L46 248 aa16.8■□□□□ 0.28
TRAF4-209ENST00000473421 AOC2O75106 756 aa16.79■□□□□ 0.28
TRAF4-209ENST00000473421 AOC3Q16853 763 aa16.79■□□□□ 0.28
TRAF4-209ENST00000473421 LRP10Q7Z4F1 713 aa16.79■□□□□ 0.28
TRAF4-209ENST00000473421 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
TRAF4-209ENST00000473421 NYXQ9GZU5 481 aa16.79■□□□□ 0.28
TRAF4-209ENST00000473421 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
TRAF4-209ENST00000473421 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
TRAF4-209ENST00000473421 ANXA1P04083 346 aa16.78■□□□□ 0.28
TRAF4-209ENST00000473421 FAM161AQ3B820 660 aa16.78■□□□□ 0.28
TRAF4-209ENST00000473421 CRAMP1Q96RY5 1269 aa16.78■□□□□ 0.28
TRAF4-209ENST00000473421 THSD7BQ9C0I4 1608 aa16.78■□□□□ 0.28
TRAF4-209ENST00000473421 SHTN1A0MZ66 631 aa16.77■□□□□ 0.28
TRAF4-209ENST00000473421 MAP2K1Q02750 393 aaPredicted RBP16.77■□□□□ 0.28
TRAF4-209ENST00000473421 CXCL9Q07325 125 aa16.77■□□□□ 0.28
TRAF4-209ENST00000473421 PDIA6Q15084 440 aa16.77■□□□□ 0.28
TRAF4-209ENST00000473421 PROSER3Q2NL68 480 aa16.77■□□□□ 0.28
TRAF4-209ENST00000473421 CC2D2BQ6DHV5 1058 aa16.77■□□□□ 0.28
TRAF4-209ENST00000473421 DLK2Q6UY11 383 aa16.77■□□□□ 0.28
TRAF4-209ENST00000473421 PAXIP1Q6ZW49 1069 aaPredicted RBP16.77■□□□□ 0.28
TRAF4-209ENST00000473421 ZNF428Q96B54 188 aa16.77■□□□□ 0.28
TRAF4-209ENST00000473421 GPR101Q96P66 508 aaPredicted RBP16.77■□□□□ 0.28
TRAF4-209ENST00000473421 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
TRAF4-209ENST00000473421 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
TRAF4-209ENST00000473421 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
TRAF4-209ENST00000473421 KIF6Q6ZMV9 814 aa16.76■□□□□ 0.27
TRAF4-209ENST00000473421 HIRAP54198 1017 aaPredicted RBP16.75■□□□□ 0.27
TRAF4-209ENST00000473421 GIGYF2Q6Y7W6 1299 aaKnown RBP16.75■□□□□ 0.27
TRAF4-209ENST00000473421 USP50Q70EL3 339 aaPredicted RBP16.75■□□□□ 0.27
TRAF4-209ENST00000473421 NIM1KQ8IY84 436 aa16.75■□□□□ 0.27
TRAF4-209ENST00000473421 RBM17Q96I25 401 aaKnown RBP16.75■□□□□ 0.27
TRAF4-209ENST00000473421 GLIS2Q9BZE0 524 aaPredicted RBP16.75■□□□□ 0.27
TRAF4-209ENST00000473421 GPRC5DQ9NZD1 345 aa16.75■□□□□ 0.27
TRAF4-209ENST00000473421 TLL2Q9Y6L7 1015 aa16.75■□□□□ 0.27
TRAF4-209ENST00000473421 TAF1P21675 1872 aa16.75■□□□□ 0.27
TRAF4-209ENST00000473421 ABCC4O15439 1325 aa16.74■□□□□ 0.27
TRAF4-209ENST00000473421 GMPSP49915 693 aaPredicted RBP16.74■□□□□ 0.27
TRAF4-209ENST00000473421 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
TRAF4-209ENST00000473421 ATP6V0A2Q9Y487 856 aa16.74■□□□□ 0.27
TRAF4-209ENST00000473421 IBTKQ9P2D0 1353 aaPredicted RBP16.74■□□□□ 0.27
TRAF4-209ENST00000473421 LAMB2P55268 1798 aa16.72■□□□□ 0.27
TRAF4-209ENST00000473421 CCDC85CA6NKD9 419 aa16.72■□□□□ 0.27
TRAF4-209ENST00000473421 HCLS1P14317 486 aaPredicted RBP16.72■□□□□ 0.27
TRAF4-209ENST00000473421 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
TRAF4-209ENST00000473421 SLC10A5Q5PT55 438 aa16.72■□□□□ 0.27
TRAF4-209ENST00000473421 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
TRAF4-209ENST00000473421 TRPM4Q8TD43 1214 aa16.72■□□□□ 0.27
TRAF4-209ENST00000473421 PNISRQ8TF01 805 aaKnown RBP16.72■□□□□ 0.27
TRAF4-209ENST00000473421 YDJCA8MPS7 323 aa16.71■□□□□ 0.27
TRAF4-209ENST00000473421 RAD17O75943 681 aa16.71■□□□□ 0.27
TRAF4-209ENST00000473421 CELF2O95319 508 aaKnown RBP16.71■□□□□ 0.27
TRAF4-209ENST00000473421 EIF2S2P20042 333 aaKnown RBP16.71■□□□□ 0.27
TRAF4-209ENST00000473421 NECTIN2Q92692 538 aa16.71■□□□□ 0.27
TRAF4-209ENST00000473421 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
TRAF4-209ENST00000473421 RTFDC1Q9BY42 306 aaPredicted RBP16.71■□□□□ 0.27
TRAF4-209ENST00000473421 ADARB2Q9NS39 739 aaKnown RBP16.71■□□□□ 0.27
TRAF4-209ENST00000473421 ZNRF3Q9ULT6 936 aa16.71■□□□□ 0.27
TRAF4-209ENST00000473421 COL4A1P02462 1669 aa16.71■□□□□ 0.27
TRAF4-209ENST00000473421 CASP8AP2Q9UKL3 1982 aa16.71■□□□□ 0.27
TRAF4-209ENST00000473421 SLC34A2O95436 690 aa16.7■□□□□ 0.26
TRAF4-209ENST00000473421 ECE1P42892 770 aa16.7■□□□□ 0.26
TRAF4-209ENST00000473421 UTP14AQ9BVJ6 771 aaKnown RBP16.7■□□□□ 0.26
TRAF4-209ENST00000473421 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
TRAF4-209ENST00000473421 KRT24Q2M2I5 525 aa16.69■□□□□ 0.26
TRAF4-209ENST00000473421 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
TRAF4-209ENST00000473421 PPP1R42Q7Z4L9 355 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms