RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 KRT24Q2M2I5 525 aa19.98■□□□□ 0.79
VTI1A-203ENST00000472892 OLFM4Q6UX06 510 aa19.98■□□□□ 0.79
VTI1A-203ENST00000472892 COPS6Q7L5N1 327 aa19.98■□□□□ 0.79
VTI1A-203ENST00000472892 PPP1R42Q7Z4L9 355 aa19.98■□□□□ 0.79
VTI1A-203ENST00000472892 LAS1LQ9Y4W2 734 aaKnown RBP19.98■□□□□ 0.79
VTI1A-203ENST00000472892 DICER1Q9UPY3 1922 aaKnown RBP19.98■□□□□ 0.79
VTI1A-203ENST00000472892 NECTIN2Q92692 538 aa19.97■□□□□ 0.79
VTI1A-203ENST00000472892 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
VTI1A-203ENST00000472892 DDX21Q9NR30 783 aaKnown RBP eCLIP19.97■□□□□ 0.79
VTI1A-203ENST00000472892 CACNA1SQ13698 1873 aa19.96■□□□□ 0.79
VTI1A-203ENST00000472892 SLC10A5Q5PT55 438 aa19.96■□□□□ 0.79
VTI1A-203ENST00000472892 XAGE3Q8WTP9 111 aa19.96■□□□□ 0.79
VTI1A-203ENST00000472892 WDR90Q96KV7 1748 aa19.96■□□□□ 0.79
VTI1A-203ENST00000472892 DDNO94850 711 aaPredicted RBP19.95■□□□□ 0.78
VTI1A-203ENST00000472892 HOXB7P09629 217 aa19.95■□□□□ 0.78
VTI1A-203ENST00000472892 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
VTI1A-203ENST00000472892 CC2D2BQ6DHV5 1058 aa19.95■□□□□ 0.78
VTI1A-203ENST00000472892 RPGRQ92834 1020 aaKnown RBP19.95■□□□□ 0.78
VTI1A-203ENST00000472892 CRAMP1Q96RY5 1269 aa19.95■□□□□ 0.78
VTI1A-203ENST00000472892 UTP14AQ9BVJ6 771 aaKnown RBP19.95■□□□□ 0.78
VTI1A-203ENST00000472892 ZNF277Q9NRM2 450 aaPredicted RBP19.95■□□□□ 0.78
VTI1A-203ENST00000472892 AIMP1Q12904 312 aaKnown RBP19.94■□□□□ 0.78
VTI1A-203ENST00000472892 HSP90AB3PQ58FF7 597 aa19.94■□□□□ 0.78
VTI1A-203ENST00000472892 SYNE4Q8N205 404 aa19.94■□□□□ 0.78
VTI1A-203ENST00000472892 RBM17Q96I25 401 aaKnown RBP19.94■□□□□ 0.78
VTI1A-203ENST00000472892 APAF1O14727 1248 aa19.93■□□□□ 0.78
VTI1A-203ENST00000472892 ZNF853P0CG23 659 aa19.93■□□□□ 0.78
VTI1A-203ENST00000472892 TCIRG1Q13488 830 aa19.93■□□□□ 0.78
VTI1A-203ENST00000472892 C3orf67Q6ZVT6 689 aa19.93■□□□□ 0.78
VTI1A-203ENST00000472892 NLRP3Q96P20 1036 aa19.93■□□□□ 0.78
VTI1A-203ENST00000472892 PSMD1Q99460 953 aa19.93■□□□□ 0.78
VTI1A-203ENST00000472892 SNED1Q8TER0 1413 aa19.93■□□□□ 0.78
VTI1A-203ENST00000472892 HTRA3P83110 453 aa19.92■□□□□ 0.78
VTI1A-203ENST00000472892 GRIPAP1Q4V328 841 aa19.92■□□□□ 0.78
VTI1A-203ENST00000472892 HDGFL1Q5TGJ6 251 aa19.92■□□□□ 0.78
VTI1A-203ENST00000472892 NLRP10Q86W26 655 aa19.92■□□□□ 0.78
VTI1A-203ENST00000472892 MBIPQ9NS73 344 aa19.92■□□□□ 0.78
VTI1A-203ENST00000472892 CHPF2Q9P2E5 772 aa19.92■□□□□ 0.78
VTI1A-203ENST00000472892 RNF123Q5XPI4 1314 aa19.92■□□□□ 0.78
VTI1A-203ENST00000472892 IARSP41252 1262 aaKnown RBP19.91■□□□□ 0.78
VTI1A-203ENST00000472892 L3MBTL3Q96JM7 780 aaPredicted RBP19.91■□□□□ 0.78
VTI1A-203ENST00000472892 RNF39Q9H2S5 420 aa19.91■□□□□ 0.78
VTI1A-203ENST00000472892 DBF4Q9UBU7 674 aaPredicted RBP19.91■□□□□ 0.78
VTI1A-203ENST00000472892 FZD9O00144 591 aa19.9■□□□□ 0.78
VTI1A-203ENST00000472892 DUSP27Q5VZP5 1158 aa19.9■□□□□ 0.78
VTI1A-203ENST00000472892 ANKRD13DQ6ZTN6 518 aa19.89■□□□□ 0.77
VTI1A-203ENST00000472892 PLBD2Q8NHP8 589 aa19.89■□□□□ 0.77
VTI1A-203ENST00000472892 KLRG1Q96E93 195 aa19.89■□□□□ 0.77
VTI1A-203ENST00000472892 IFT57Q9NWB7 429 aa19.89■□□□□ 0.77
VTI1A-203ENST00000472892 ZNF541Q9H0D2 1346 aa19.88■□□□□ 0.77
VTI1A-203ENST00000472892 IQCA1LA6NCM1 817 aa19.88■□□□□ 0.77
VTI1A-203ENST00000472892 PPEF1O14829 653 aaPredicted RBP19.88■□□□□ 0.77
VTI1A-203ENST00000472892 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
VTI1A-203ENST00000472892 CALD1Q05682 793 aaKnown RBP19.88■□□□□ 0.77
VTI1A-203ENST00000472892 HYPKQ9NX55 129 aa19.88■□□□□ 0.77
VTI1A-203ENST00000472892 TRMT112Q9UI30 125 aaKnown RBP19.88■□□□□ 0.77
VTI1A-203ENST00000472892 GNAI1P63096 354 aa19.87■□□□□ 0.77
VTI1A-203ENST00000472892 CHADLQ6NUI6 762 aa19.87■□□□□ 0.77
VTI1A-203ENST00000472892 SH3TC1Q8TE82 1336 aa19.86■□□□□ 0.77
VTI1A-203ENST00000472892 HCLS1P14317 486 aaPredicted RBP19.86■□□□□ 0.77
VTI1A-203ENST00000472892 CCDC184Q52MB2 194 aa19.86■□□□□ 0.77
VTI1A-203ENST00000472892 JDP2Q8WYK2 163 aa19.86■□□□□ 0.77
VTI1A-203ENST00000472892 ISCA1Q9BUE6 129 aa19.86■□□□□ 0.77
VTI1A-203ENST00000472892 TAF1DQ9H5J8 278 aaPredicted RBP19.86■□□□□ 0.77
VTI1A-203ENST00000472892 ATP6V0A2Q9Y487 856 aa19.86■□□□□ 0.77
VTI1A-203ENST00000472892 TCERG1O14776 1098 aaKnown RBP19.85■□□□□ 0.77
VTI1A-203ENST00000472892 BBOX1O75936 387 aa19.85■□□□□ 0.77
VTI1A-203ENST00000472892 POTEIP0CG38 1075 aa19.85■□□□□ 0.77
VTI1A-203ENST00000472892 POTEJP0CG39 1038 aa19.85■□□□□ 0.77
VTI1A-203ENST00000472892 SLC51AQ86UW1 340 aa19.85■□□□□ 0.77
VTI1A-203ENST00000472892 JMYQ8N9B5 988 aa19.85■□□□□ 0.77
VTI1A-203ENST00000472892 ABCC4O15439 1325 aa19.84■□□□□ 0.77
VTI1A-203ENST00000472892 GPC2Q8N158 579 aa19.84■□□□□ 0.77
VTI1A-203ENST00000472892 ANKRD36CQ5JPF3 1778 aa19.83■□□□□ 0.77
VTI1A-203ENST00000472892 TRIM28Q13263 835 aaKnown RBP19.83■□□□□ 0.77
VTI1A-203ENST00000472892 TMX4Q9H1E5 349 aaPredicted RBP19.83■□□□□ 0.77
VTI1A-203ENST00000472892 VPS33BQ9H267 617 aa19.83■□□□□ 0.77
VTI1A-203ENST00000472892 HACL1Q9UJ83 578 aa19.83■□□□□ 0.77
VTI1A-203ENST00000472892 SCN4AP35499 1836 aa19.82■□□□□ 0.76
VTI1A-203ENST00000472892 LDHDQ86WU2 507 aa19.82■□□□□ 0.76
VTI1A-203ENST00000472892 SP8Q8IXZ3 490 aa19.82■□□□□ 0.76
VTI1A-203ENST00000472892 LARGE2Q8N3Y3 721 aa19.82■□□□□ 0.76
VTI1A-203ENST00000472892 ATP5J2-PTCD1G3V325 749 aa19.81■□□□□ 0.76
VTI1A-203ENST00000472892 ELL2O00472 640 aaPredicted RBP19.81■□□□□ 0.76
VTI1A-203ENST00000472892 EIF6P56537 245 aaKnown RBP19.81■□□□□ 0.76
VTI1A-203ENST00000472892 DDX46Q7L014 1031 aaKnown RBP19.81■□□□□ 0.76
VTI1A-203ENST00000472892 C8orf58Q8NAV2 365 aa19.81■□□□□ 0.76
VTI1A-203ENST00000472892 RTFDC1Q9BY42 306 aaPredicted RBP19.81■□□□□ 0.76
VTI1A-203ENST00000472892 COL4A5P29400 1685 aa19.81■□□□□ 0.76
VTI1A-203ENST00000472892 EPHX2P34913 555 aa19.8■□□□□ 0.76
VTI1A-203ENST00000472892 ZNF428Q96B54 188 aa19.8■□□□□ 0.76
VTI1A-203ENST00000472892 PHAXQ9H814 394 aaKnown RBP19.8■□□□□ 0.76
VTI1A-203ENST00000472892 GRAPQ13588 217 aa19.79■□□□□ 0.76
VTI1A-203ENST00000472892 SF3B3Q15393 1217 aaKnown RBP19.79■□□□□ 0.76
VTI1A-203ENST00000472892 CCDC27Q2M243 656 aa19.79■□□□□ 0.76
VTI1A-203ENST00000472892 PNMA8AQ86V59 439 aaPredicted RBP19.79■□□□□ 0.76
VTI1A-203ENST00000472892 SUPT20HQ8NEM7 779 aa19.79■□□□□ 0.76
VTI1A-203ENST00000472892 GRAPLQ8TC17 118 aaPredicted RBP19.79■□□□□ 0.76
VTI1A-203ENST00000472892 FAM89AQ96GI7 184 aa19.79■□□□□ 0.76
VTI1A-203ENST00000472892 CHMP4AQ9BY43 222 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms