RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 HDAC5Q9UQL6 1122 aa13.25□□□□□ -0.29
UBE2F-220ENST00000472479 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
UBE2F-220ENST00000472479 ABCC4O15439 1325 aa13.25□□□□□ -0.29
UBE2F-220ENST00000472479 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
UBE2F-220ENST00000472479 JARID2Q92833 1246 aaPredicted RBP13.24□□□□□ -0.29
UBE2F-220ENST00000472479 UTP14AQ9BVJ6 771 aaKnown RBP13.24□□□□□ -0.29
UBE2F-220ENST00000472479 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
UBE2F-220ENST00000472479 CACNA1FO60840 1977 aa13.24□□□□□ -0.29
UBE2F-220ENST00000472479 ZBTB7AO95365 584 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 GNAI3P08754 354 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 UBTFL1P0CB47 393 aaPredicted RBP13.23□□□□□ -0.29
UBE2F-220ENST00000472479 GCKRQ14397 625 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 ZNF34Q8IZ26 560 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 RGL2O15211 777 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 POLD1P28340 1107 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
UBE2F-220ENST00000472479 NFIXQ14938 502 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 RREB1Q92766 1687 aa13.23□□□□□ -0.29
UBE2F-220ENST00000472479 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
UBE2F-220ENST00000472479 NUP188Q5SRE5 1749 aa13.22□□□□□ -0.29
UBE2F-220ENST00000472479 GRM8O00222 908 aa13.22□□□□□ -0.29
UBE2F-220ENST00000472479 SERPINB2P05120 415 aa13.22□□□□□ -0.29
UBE2F-220ENST00000472479 MMP10P09238 476 aa13.22□□□□□ -0.29
UBE2F-220ENST00000472479 HSP90B1P14625 803 aaKnown RBP13.22□□□□□ -0.29
UBE2F-220ENST00000472479 DSG3P32926 999 aa13.22□□□□□ -0.29
UBE2F-220ENST00000472479 UBE3BQ7Z3V4 1068 aa13.22□□□□□ -0.29
UBE2F-220ENST00000472479 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
UBE2F-220ENST00000472479 PDGFDQ9GZP0 370 aaPredicted RBP13.22□□□□□ -0.29
UBE2F-220ENST00000472479 ST5P78524 1137 aa13.21□□□□□ -0.3
UBE2F-220ENST00000472479 CNBD1Q8NA66 436 aa13.21□□□□□ -0.3
UBE2F-220ENST00000472479 ZBTB38Q8NAP3 1195 aaPredicted RBP13.21□□□□□ -0.3
UBE2F-220ENST00000472479 EXOC6Q8TAG9 804 aa13.21□□□□□ -0.3
UBE2F-220ENST00000472479 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.3
UBE2F-220ENST00000472479 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
UBE2F-220ENST00000472479 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
UBE2F-220ENST00000472479 GNAI2P04899 355 aa13.2□□□□□ -0.3
UBE2F-220ENST00000472479 NUTM1Q86Y26 1132 aa13.2□□□□□ -0.3
UBE2F-220ENST00000472479 MEIS3Q99687 375 aa13.2□□□□□ -0.3
UBE2F-220ENST00000472479 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
UBE2F-220ENST00000472479 CARMIL3Q8ND23 1372 aa13.19□□□□□ -0.3
UBE2F-220ENST00000472479 UBN2Q6ZU65 1347 aa13.19□□□□□ -0.3
UBE2F-220ENST00000472479 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
UBE2F-220ENST00000472479 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
UBE2F-220ENST00000472479 PCCAP05165 728 aaPredicted RBP13.19□□□□□ -0.3
UBE2F-220ENST00000472479 TM4SF1P30408 202 aa13.19□□□□□ -0.3
UBE2F-220ENST00000472479 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
UBE2F-220ENST00000472479 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
UBE2F-220ENST00000472479 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
UBE2F-220ENST00000472479 USP44Q9H0E7 712 aa13.19□□□□□ -0.3
UBE2F-220ENST00000472479 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
UBE2F-220ENST00000472479 H7C1W4 665 aa13.18□□□□□ -0.3
UBE2F-220ENST00000472479 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
UBE2F-220ENST00000472479 ERFEQ4G0M1 354 aa13.18□□□□□ -0.3
UBE2F-220ENST00000472479 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
UBE2F-220ENST00000472479 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
UBE2F-220ENST00000472479 PPP1R1BQ9UD71 204 aaPredicted RBP13.18□□□□□ -0.3
UBE2F-220ENST00000472479 HCLS1P14317 486 aaPredicted RBP13.17□□□□□ -0.3
UBE2F-220ENST00000472479 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
UBE2F-220ENST00000472479 LRRFIP2Q9Y608 721 aaKnown RBP13.17□□□□□ -0.3
UBE2F-220ENST00000472479 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
UBE2F-220ENST00000472479 NTSR2O95665 410 aa13.16□□□□□ -0.3
UBE2F-220ENST00000472479 DDR1Q08345 913 aa13.16□□□□□ -0.3
UBE2F-220ENST00000472479 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
UBE2F-220ENST00000472479 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
UBE2F-220ENST00000472479 ARFGEF2Q9Y6D5 1785 aa13.16□□□□□ -0.3
UBE2F-220ENST00000472479 PDE8AO60658 829 aa13.16□□□□□ -0.3
UBE2F-220ENST00000472479 AAMPQ13685 434 aa13.16□□□□□ -0.3
UBE2F-220ENST00000472479 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
UBE2F-220ENST00000472479 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
UBE2F-220ENST00000472479 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
UBE2F-220ENST00000472479 PRR5LQ6MZQ0 368 aa13.15□□□□□ -0.3
UBE2F-220ENST00000472479 ZBTB40Q9NUA8 1239 aa13.15□□□□□ -0.3
UBE2F-220ENST00000472479 NUP98P52948 1817 aa13.15□□□□□ -0.3
UBE2F-220ENST00000472479 C4AP0C0L4 1744 aa13.14□□□□□ -0.31
UBE2F-220ENST00000472479 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
UBE2F-220ENST00000472479 HMMRO75330 724 aa13.14□□□□□ -0.31
UBE2F-220ENST00000472479 LMBR1LQ6UX01 489 aa13.14□□□□□ -0.31
UBE2F-220ENST00000472479 BICC1Q9H694 974 aaKnown RBP13.14□□□□□ -0.31
UBE2F-220ENST00000472479 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
UBE2F-220ENST00000472479 PDE6BP35913 854 aa13.13□□□□□ -0.31
UBE2F-220ENST00000472479 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
UBE2F-220ENST00000472479 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
UBE2F-220ENST00000472479 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
UBE2F-220ENST00000472479 UTYO14607 1347 aa13.13□□□□□ -0.31
UBE2F-220ENST00000472479 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
UBE2F-220ENST00000472479 SRGAP3O43295 1099 aa13.12□□□□□ -0.31
UBE2F-220ENST00000472479 CTSWP56202 376 aa13.12□□□□□ -0.31
UBE2F-220ENST00000472479 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
UBE2F-220ENST00000472479 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
UBE2F-220ENST00000472479 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
UBE2F-220ENST00000472479 BRIP1Q9BX63 1249 aa13.12□□□□□ -0.31
UBE2F-220ENST00000472479 BCORQ6W2J9 1755 aa13.12□□□□□ -0.31
UBE2F-220ENST00000472479 AFDNP55196 1824 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms