RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 EPS15P42566 896 aa13.4□□□□□ -0.26
SCAMP3-205ENST00000472397 KIF6Q6ZMV9 814 aa13.4□□□□□ -0.26
SCAMP3-205ENST00000472397 AIDAQ96BJ3 306 aa13.4□□□□□ -0.26
SCAMP3-205ENST00000472397 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
SCAMP3-205ENST00000472397 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
SCAMP3-205ENST00000472397 FZD9O00144 591 aa13.39□□□□□ -0.27
SCAMP3-205ENST00000472397 ALDH1B1P30837 517 aa13.39□□□□□ -0.27
SCAMP3-205ENST00000472397 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
SCAMP3-205ENST00000472397 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
SCAMP3-205ENST00000472397 LARGE2Q8N3Y3 721 aa13.39□□□□□ -0.27
SCAMP3-205ENST00000472397 JDP2Q8WYK2 163 aa13.39□□□□□ -0.27
SCAMP3-205ENST00000472397 PPEF1O14829 653 aaPredicted RBP13.38□□□□□ -0.27
SCAMP3-205ENST00000472397 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
SCAMP3-205ENST00000472397 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
SCAMP3-205ENST00000472397 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
SCAMP3-205ENST00000472397 NYXQ9GZU5 481 aa13.37□□□□□ -0.27
SCAMP3-205ENST00000472397 HTATSF1O43719 755 aaKnown RBP13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 NEFMP07197 916 aa13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 NFE2L2Q16236 605 aa13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 AOC3Q16853 763 aa13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 CYP4F22Q6NT55 531 aa13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 GPC2Q8N158 579 aa13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 WDR33Q9C0J8 1336 aaKnown RBP13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 LTBP1Q14766 1721 aa13.36□□□□□ -0.27
SCAMP3-205ENST00000472397 SCN4AP35499 1836 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 PPIP5K2O43314 1243 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 NTSR2O95665 410 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 HSPA8P11142 646 aaKnown RBP13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 SCNN1DP51172 638 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 CRY2Q49AN0 593 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 DLK2Q6UY11 383 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 RBM17Q96I25 401 aaKnown RBP13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
SCAMP3-205ENST00000472397 SNED1Q8TER0 1413 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 SHTN1A0MZ66 631 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 ERVV-1B6SEH8 477 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 AOC2O75106 756 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 PNMA8AQ86V59 439 aaPredicted RBP13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 NIM1KQ8IY84 436 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 ZNF34Q8IZ26 560 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 PSMD1Q99460 953 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 ZNF408Q9H9D4 720 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 DLG5Q8TDM6 1919 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 NUP98P52948 1817 aa13.34□□□□□ -0.27
SCAMP3-205ENST00000472397 CCDC146Q8IYE0 955 aa13.33□□□□□ -0.28
SCAMP3-205ENST00000472397 LAS1LQ9Y4W2 734 aaKnown RBP13.33□□□□□ -0.28
SCAMP3-205ENST00000472397 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 RASSF10A6NK89 507 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 RAD17O75943 681 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 CST9Q5W186 159 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 CAPNS2Q96L46 248 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 UTP14AQ9BVJ6 771 aaKnown RBP13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 ABCC4O15439 1325 aa13.32□□□□□ -0.28
SCAMP3-205ENST00000472397 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 RIPK4P57078 832 aa13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 PDIA6Q15084 440 aa13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 RTL5Q5HYW3 569 aaPredicted RBP13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 PPP1R42Q7Z4L9 355 aa13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 NLRP3Q96P20 1036 aa13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 CRAMP1Q96RY5 1269 aa13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 GLIS2Q9BZE0 524 aaPredicted RBP13.31□□□□□ -0.28
SCAMP3-205ENST00000472397 CCDC85CA6NKD9 419 aa13.3□□□□□ -0.28
SCAMP3-205ENST00000472397 CXCL9Q07325 125 aa13.3□□□□□ -0.28
SCAMP3-205ENST00000472397 CC2D2BQ6DHV5 1058 aa13.3□□□□□ -0.28
SCAMP3-205ENST00000472397 COPS6Q7L5N1 327 aa13.3□□□□□ -0.28
SCAMP3-205ENST00000472397 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
SCAMP3-205ENST00000472397 GPR101Q96P66 508 aaPredicted RBP13.3□□□□□ -0.28
SCAMP3-205ENST00000472397 CELF2O95319 508 aaKnown RBP13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 ABHD8Q96I13 439 aa13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 CFAP44Q96MT7 982 aa13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 BCL2L13Q9BXK5 485 aa13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 TMX4Q9H1E5 349 aaPredicted RBP13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 ATP6V0A2Q9Y487 856 aa13.29□□□□□ -0.28
SCAMP3-205ENST00000472397 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
SCAMP3-205ENST00000472397 RGL2O15211 777 aa13.28□□□□□ -0.28
SCAMP3-205ENST00000472397 MPNDQ8N594 471 aa13.28□□□□□ -0.28
SCAMP3-205ENST00000472397 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
SCAMP3-205ENST00000472397 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
SCAMP3-205ENST00000472397 TRMT112Q9UI30 125 aaKnown RBP13.28□□□□□ -0.28
SCAMP3-205ENST00000472397 TAF1P21675 1872 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms