RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 PRPF40BQ6NWY9 871 aaKnown RBP10.76□□□□□ -0.69
TSPAN1-205ENST00000472170 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
TSPAN1-205ENST00000472170 MYH16Q9H6N6 1097 aa10.76□□□□□ -0.69
TSPAN1-205ENST00000472170 BRCA1P38398 1863 aaKnown RBP10.76□□□□□ -0.69
TSPAN1-205ENST00000472170 KLRG2A4D1S0 409 aaPredicted RBP10.75□□□□□ -0.69
TSPAN1-205ENST00000472170 NEXNQ0ZGT2 675 aa10.75□□□□□ -0.69
TSPAN1-205ENST00000472170 KRT24Q2M2I5 525 aa10.75□□□□□ -0.69
TSPAN1-205ENST00000472170 PROSER3Q2NL68 480 aa10.75□□□□□ -0.69
TSPAN1-205ENST00000472170 IBTKQ9P2D0 1353 aaPredicted RBP10.75□□□□□ -0.69
TSPAN1-205ENST00000472170 TWISTNBQ3B726 338 aaPredicted RBP10.74□□□□□ -0.69
TSPAN1-205ENST00000472170 SLC10A5Q5PT55 438 aa10.74□□□□□ -0.69
TSPAN1-205ENST00000472170 DDX46Q7L014 1031 aaKnown RBP10.74□□□□□ -0.69
TSPAN1-205ENST00000472170 CRAMP1Q96RY5 1269 aa10.74□□□□□ -0.69
TSPAN1-205ENST00000472170 SH3TC1Q8TE82 1336 aa10.74□□□□□ -0.69
TSPAN1-205ENST00000472170 KIAA1551Q9HCM1 1747 aa10.73□□□□□ -0.69
TSPAN1-205ENST00000472170 BBOX1O75936 387 aa10.73□□□□□ -0.69
TSPAN1-205ENST00000472170 NLRP10Q86W26 655 aa10.73□□□□□ -0.69
TSPAN1-205ENST00000472170 C8orf58Q8NAV2 365 aa10.73□□□□□ -0.69
TSPAN1-205ENST00000472170 JDP2Q8WYK2 163 aa10.73□□□□□ -0.69
TSPAN1-205ENST00000472170 DLEC1Q9Y238 1755 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 GLTPD2A6NH11 291 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 TOMM70O94826 608 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 NTSR2O95665 410 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 VEGFAP15692 232 aaPredicted RBP10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 HOXA10P31260 410 aaPredicted RBP10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 FKBP4Q02790 459 aaKnown RBP eCLIP10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 RASSF7Q02833 373 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 TMC4Q7Z404 712 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 SUPT20HQ8NEM7 779 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 TSR2Q969E8 191 aaKnown RBP10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 LTBP3Q9NS15 1303 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 CCDC88AQ3V6T2 1871 aa10.72□□□□□ -0.69
TSPAN1-205ENST00000472170 ADCY9O60503 1353 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 SBF1O95248 1867 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 TRIM28Q13263 835 aaKnown RBP10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 CRY2Q49AN0 593 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 KSR2Q6VAB6 950 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 UBN2Q6ZU65 1347 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 LRP10Q7Z4F1 713 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 SYNE4Q8N205 404 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 ANKRD31Q8N7Z5 1873 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 CCDC191Q8NCU4 936 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 RRAGCQ9HB90 399 aa10.71□□□□□ -0.69
TSPAN1-205ENST00000472170 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 TCERG1O14776 1098 aaKnown RBP10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 PPEF1O14829 653 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 MYD88Q99836 296 aa10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 VPS33BQ9H267 617 aa10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 PHAXQ9H814 394 aaKnown RBP10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 CWC25Q9NXE8 425 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 CACNA1SQ13698 1873 aa10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 SLX4Q8IY92 1834 aa10.7□□□□□ -0.7
TSPAN1-205ENST00000472170 IQCA1LA6NCM1 817 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 CCER2I3L3R5 266 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 NFKBIEO00221 500 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 HCLS1P14317 486 aaPredicted RBP10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 HSPA6P17066 643 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 IARSP41252 1262 aaKnown RBP10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 SP8Q8IXZ3 490 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 ZBTB38Q8NAP3 1195 aaPredicted RBP10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 C7orf43Q8WVR3 580 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 FAM89AQ96GI7 184 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 PSMD1Q99460 953 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 ISCA1Q9BUE6 129 aa10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 METTL22Q9BUU2 404 aaPredicted RBP10.69□□□□□ -0.7
TSPAN1-205ENST00000472170 CACNA1FO60840 1977 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 RIC1Q4ADV7 1423 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 KIF3CO14782 793 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 FKBP5Q13451 457 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 RTL5Q5HYW3 569 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 MPNDQ8N594 471 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 TSPYL6Q8N831 410 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 RBM46Q8TBY0 533 aaKnown RBP10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 NMRK2Q9NPI5 230 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 ZNF277Q9NRM2 450 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 MAP3K2Q9Y2U5 619 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 ATP6V0A2Q9Y487 856 aa10.68□□□□□ -0.7
TSPAN1-205ENST00000472170 PI4KAP2A4QPH2 592 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 G3V3G9 751 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 PCCAP05165 728 aaPredicted RBP10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 EXOSC9Q06265 439 aaKnown RBP10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 FSTL1Q12841 308 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 GRAPQ13588 217 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 CCDC152Q4G0S7 254 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 DCAF8Q5TAQ9 597 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 DPP8Q6V1X1 898 aaPredicted RBP10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 PI4KAP1Q8N8J0 262 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 SMC1BQ8NDV3 1235 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 GRAPLQ8TC17 118 aaPredicted RBP10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 FER1L6Q2WGJ9 1857 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 ANKRD36CQ5JPF3 1778 aa10.67□□□□□ -0.7
TSPAN1-205ENST00000472170 ABCC12Q96J65 1359 aa10.66□□□□□ -0.7
TSPAN1-205ENST00000472170 FANCIQ9NVI1 1328 aa10.66□□□□□ -0.7
TSPAN1-205ENST00000472170 E9PSI1 815 aa10.66□□□□□ -0.7
TSPAN1-205ENST00000472170 PDE8AO60658 829 aa10.66□□□□□ -0.7
TSPAN1-205ENST00000472170 VAMP4O75379 141 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms