RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 F6X3S4 739 aa17.81■□□□□ 0.44
SSR4-207ENST00000471724 NPHP1O15259 732 aa17.81■□□□□ 0.44
SSR4-207ENST00000471724 NLRP10Q86W26 655 aa17.81■□□□□ 0.44
SSR4-207ENST00000471724 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
SSR4-207ENST00000471724 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
SSR4-207ENST00000471724 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
SSR4-207ENST00000471724 ABCC4O15439 1325 aa17.8■□□□□ 0.44
SSR4-207ENST00000471724 SERPINB2P05120 415 aa17.8■□□□□ 0.44
SSR4-207ENST00000471724 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
SSR4-207ENST00000471724 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
SSR4-207ENST00000471724 TNRC6CQ9HCJ0 1690 aaKnown RBP17.8■□□□□ 0.44
SSR4-207ENST00000471724 ATP5J2-PTCD1G3V325 749 aa17.79■□□□□ 0.44
SSR4-207ENST00000471724 MS4A1P11836 297 aa17.79■□□□□ 0.44
SSR4-207ENST00000471724 TRIM27P14373 513 aa17.79■□□□□ 0.44
SSR4-207ENST00000471724 ST5P78524 1137 aa17.79■□□□□ 0.44
SSR4-207ENST00000471724 TPTE2Q6XPS3 522 aa17.79■□□□□ 0.44
SSR4-207ENST00000471724 SRCIN1Q9C0H9 1055 aa17.79■□□□□ 0.44
SSR4-207ENST00000471724 COL11A2P13942 1736 aaPredicted RBP17.78■□□□□ 0.44
SSR4-207ENST00000471724 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
SSR4-207ENST00000471724 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
SSR4-207ENST00000471724 ALDH1L1O75891 902 aa17.78■□□□□ 0.44
SSR4-207ENST00000471724 NTSR2O95665 410 aa17.78■□□□□ 0.44
SSR4-207ENST00000471724 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
SSR4-207ENST00000471724 BEND3Q5T5X7 828 aa17.78■□□□□ 0.44
SSR4-207ENST00000471724 FTSJ3Q8IY81 847 aaKnown RBP17.78■□□□□ 0.44
SSR4-207ENST00000471724 UTP14AQ9BVJ6 771 aaKnown RBP17.78■□□□□ 0.44
SSR4-207ENST00000471724 IGKV5-2P06315 115 aa17.77■□□□□ 0.44
SSR4-207ENST00000471724 GTF2E1P29083 439 aaPredicted RBP17.77■□□□□ 0.44
SSR4-207ENST00000471724 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.44
SSR4-207ENST00000471724 SUSD4Q5VX71 490 aa17.77■□□□□ 0.44
SSR4-207ENST00000471724 PRR5LQ6MZQ0 368 aa17.77■□□□□ 0.44
SSR4-207ENST00000471724 TRMT112Q9UI30 125 aaKnown RBP17.77■□□□□ 0.44
SSR4-207ENST00000471724 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
SSR4-207ENST00000471724 FAM177BA6PVY3 158 aa17.76■□□□□ 0.43
SSR4-207ENST00000471724 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
SSR4-207ENST00000471724 GPR162Q16538 588 aa17.76■□□□□ 0.43
SSR4-207ENST00000471724 NLGN2Q8NFZ4 835 aa17.76■□□□□ 0.43
SSR4-207ENST00000471724 BRCA1P38398 1863 aaKnown RBP17.75■□□□□ 0.43
SSR4-207ENST00000471724 PCCAP05165 728 aaPredicted RBP17.75■□□□□ 0.43
SSR4-207ENST00000471724 GCKRQ14397 625 aa17.75■□□□□ 0.43
SSR4-207ENST00000471724 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
SSR4-207ENST00000471724 ZBTB38Q8NAP3 1195 aaPredicted RBP17.75■□□□□ 0.43
SSR4-207ENST00000471724 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
SSR4-207ENST00000471724 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
SSR4-207ENST00000471724 INTS3Q68E01 1043 aaKnown RBP17.74■□□□□ 0.43
SSR4-207ENST00000471724 CDHR2Q9BYE9 1310 aa17.73■□□□□ 0.43
SSR4-207ENST00000471724 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
SSR4-207ENST00000471724 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
SSR4-207ENST00000471724 NUTM1Q86Y26 1132 aa17.73■□□□□ 0.43
SSR4-207ENST00000471724 CLUAP1Q96AJ1 413 aa17.73■□□□□ 0.43
SSR4-207ENST00000471724 GRM8O00222 908 aa17.72■□□□□ 0.43
SSR4-207ENST00000471724 PDE6BP35913 854 aa17.72■□□□□ 0.43
SSR4-207ENST00000471724 TGFB2P61812 414 aa17.72■□□□□ 0.43
SSR4-207ENST00000471724 ERFEQ4G0M1 354 aa17.72■□□□□ 0.43
SSR4-207ENST00000471724 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
SSR4-207ENST00000471724 BRIP1Q9BX63 1249 aa17.72■□□□□ 0.43
SSR4-207ENST00000471724 C9orf78Q9NZ63 289 aaPredicted RBP17.72■□□□□ 0.43
SSR4-207ENST00000471724 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
SSR4-207ENST00000471724 GRIN3BO60391 1043 aa17.71■□□□□ 0.43
SSR4-207ENST00000471724 PDE3AQ14432 1141 aa17.71■□□□□ 0.43
SSR4-207ENST00000471724 UBE3BQ7Z3V4 1068 aa17.71■□□□□ 0.43
SSR4-207ENST00000471724 FAM89AQ96GI7 184 aa17.71■□□□□ 0.43
SSR4-207ENST00000471724 TNNQ9UQP3 1299 aa17.7■□□□□ 0.42
SSR4-207ENST00000471724 CHD4Q14839 1912 aa17.7■□□□□ 0.42
SSR4-207ENST00000471724 UTYO14607 1347 aa17.7■□□□□ 0.42
SSR4-207ENST00000471724 H7C1W4 665 aa17.69■□□□□ 0.42
SSR4-207ENST00000471724 IRS4O14654 1257 aaPredicted RBP17.69■□□□□ 0.42
SSR4-207ENST00000471724 PLIN1O60240 522 aa17.69■□□□□ 0.42
SSR4-207ENST00000471724 SLC10A5Q5PT55 438 aa17.69■□□□□ 0.42
SSR4-207ENST00000471724 ITPRIPQ8IWB1 547 aa17.69■□□□□ 0.42
SSR4-207ENST00000471724 TMEM57Q8N5G2 664 aa17.69■□□□□ 0.42
SSR4-207ENST00000471724 HDAC5Q9UQL6 1122 aa17.69■□□□□ 0.42
SSR4-207ENST00000471724 ARFGEF1Q9Y6D6 1849 aa17.68■□□□□ 0.42
SSR4-207ENST00000471724 PDE8AO60658 829 aa17.68■□□□□ 0.42
SSR4-207ENST00000471724 RLBP1P12271 317 aa17.68■□□□□ 0.42
SSR4-207ENST00000471724 YY1P25490 414 aa17.68■□□□□ 0.42
SSR4-207ENST00000471724 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
SSR4-207ENST00000471724 NLRP3Q96P20 1036 aa17.68■□□□□ 0.42
SSR4-207ENST00000471724 GNAI3P08754 354 aa17.67■□□□□ 0.42
SSR4-207ENST00000471724 UBTFL1P0CB47 393 aaPredicted RBP17.67■□□□□ 0.42
SSR4-207ENST00000471724 CCDC24Q8N4L8 307 aa17.67■□□□□ 0.42
SSR4-207ENST00000471724 PANK1Q8TE04 598 aa17.67■□□□□ 0.42
SSR4-207ENST00000471724 SPEF2Q9C093 1822 aa17.67■□□□□ 0.42
SSR4-207ENST00000471724 H0YIN7 160 aa17.66■□□□□ 0.42
SSR4-207ENST00000471724 HCLS1P14317 486 aaPredicted RBP17.66■□□□□ 0.42
SSR4-207ENST00000471724 CASP7P55210 303 aa17.66■□□□□ 0.42
SSR4-207ENST00000471724 MVPQ14764 893 aaKnown RBP17.66■□□□□ 0.42
SSR4-207ENST00000471724 CRY2Q49AN0 593 aa17.66■□□□□ 0.42
SSR4-207ENST00000471724 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
SSR4-207ENST00000471724 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
SSR4-207ENST00000471724 CHMP4BQ9H444 224 aaKnown RBP17.66■□□□□ 0.42
SSR4-207ENST00000471724 DDX19BQ9UMR2 479 aa17.66■□□□□ 0.42
SSR4-207ENST00000471724 KLRG2A4D1S0 409 aaPredicted RBP17.65■□□□□ 0.42
SSR4-207ENST00000471724 CTSWP56202 376 aa17.65■□□□□ 0.42
SSR4-207ENST00000471724 C2CD5Q86YS7 1000 aa17.65■□□□□ 0.42
SSR4-207ENST00000471724 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
SSR4-207ENST00000471724 RPGRQ92834 1020 aaKnown RBP17.65■□□□□ 0.42
SSR4-207ENST00000471724 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.41
SSR4-207ENST00000471724 YBX3P16989 372 aaKnown RBP eCLIP17.64■□□□□ 0.412e-11■□□□□ 11.1
SSR4-207ENST00000471724 MEIS3Q99687 375 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms