RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 ATF7IPQ6VMQ6 1270 aa19.38■□□□□ 0.69
COMMD6-208ENST00000471682 CWC25Q9NXE8 425 aaPredicted RBP19.38■□□□□ 0.69
COMMD6-208ENST00000471682 PDZRN3Q9UPQ7 1066 aa19.38■□□□□ 0.69
COMMD6-208ENST00000471682 RIC1Q4ADV7 1423 aa19.37■□□□□ 0.69
COMMD6-208ENST00000471682 NEURL1BA8MQ27 555 aa19.37■□□□□ 0.69
COMMD6-208ENST00000471682 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
COMMD6-208ENST00000471682 NPHP1O15259 732 aa19.36■□□□□ 0.69
COMMD6-208ENST00000471682 HSP90B1P14625 803 aaKnown RBP19.36■□□□□ 0.69
COMMD6-208ENST00000471682 SLC10A5Q5PT55 438 aa19.36■□□□□ 0.69
COMMD6-208ENST00000471682 ZBTB38Q8NAP3 1195 aaPredicted RBP19.36■□□□□ 0.69
COMMD6-208ENST00000471682 BRIP1Q9BX63 1249 aa19.36■□□□□ 0.69
COMMD6-208ENST00000471682 SRCIN1Q9C0H9 1055 aa19.36■□□□□ 0.69
COMMD6-208ENST00000471682 TRMT112Q9UI30 125 aaKnown RBP19.36■□□□□ 0.69
COMMD6-208ENST00000471682 KIF13BQ9NQT8 1826 aa19.36■□□□□ 0.69
COMMD6-208ENST00000471682 PCCAP05165 728 aaPredicted RBP19.35■□□□□ 0.69
COMMD6-208ENST00000471682 TRIM27P14373 513 aa19.35■□□□□ 0.69
COMMD6-208ENST00000471682 GTF2E1P29083 439 aaPredicted RBP19.35■□□□□ 0.69
COMMD6-208ENST00000471682 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
COMMD6-208ENST00000471682 TGFB2P61812 414 aa19.35■□□□□ 0.69
COMMD6-208ENST00000471682 ABCC4O15439 1325 aa19.34■□□□□ 0.69
COMMD6-208ENST00000471682 MS4A1P11836 297 aa19.34■□□□□ 0.69
COMMD6-208ENST00000471682 PDE6BP35913 854 aa19.34■□□□□ 0.69
COMMD6-208ENST00000471682 GCKRQ14397 625 aa19.34■□□□□ 0.69
COMMD6-208ENST00000471682 CWF19L2Q2TBE0 894 aaKnown RBP19.34■□□□□ 0.69
COMMD6-208ENST00000471682 SLC4A10Q6U841 1118 aa19.34■□□□□ 0.69
COMMD6-208ENST00000471682 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
COMMD6-208ENST00000471682 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
COMMD6-208ENST00000471682 KLRG2A4D1S0 409 aaPredicted RBP19.33■□□□□ 0.68
COMMD6-208ENST00000471682 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.33■□□□□ 0.68
COMMD6-208ENST00000471682 FAM177BA6PVY3 158 aa19.32■□□□□ 0.68
COMMD6-208ENST00000471682 H7C1W4 665 aa19.32■□□□□ 0.68
COMMD6-208ENST00000471682 ERFEQ4G0M1 354 aa19.32■□□□□ 0.68
COMMD6-208ENST00000471682 INTS3Q68E01 1043 aaKnown RBP19.32■□□□□ 0.68
COMMD6-208ENST00000471682 NUTM1Q86Y26 1132 aa19.32■□□□□ 0.68
COMMD6-208ENST00000471682 SYT17Q9BSW7 474 aa19.32■□□□□ 0.68
COMMD6-208ENST00000471682 FHDC1Q9C0D6 1143 aaPredicted RBP19.32■□□□□ 0.68
COMMD6-208ENST00000471682 N4BP2Q86UW6 1770 aaPredicted RBP19.32■□□□□ 0.68
COMMD6-208ENST00000471682 UTYO14607 1347 aa19.3■□□□□ 0.68
COMMD6-208ENST00000471682 DZIP1LQ8IYY4 767 aaKnown RBP19.3■□□□□ 0.68
COMMD6-208ENST00000471682 FAM89AQ96GI7 184 aa19.3■□□□□ 0.68
COMMD6-208ENST00000471682 ABCC12Q96J65 1359 aa19.3■□□□□ 0.68
COMMD6-208ENST00000471682 GRM8O00222 908 aa19.29■□□□□ 0.68
COMMD6-208ENST00000471682 IRS4O14654 1257 aaPredicted RBP19.29■□□□□ 0.68
COMMD6-208ENST00000471682 CRY2Q49AN0 593 aa19.29■□□□□ 0.68
COMMD6-208ENST00000471682 NLRP3Q96P20 1036 aa19.29■□□□□ 0.68
COMMD6-208ENST00000471682 PLA2G12BQ9BX93 195 aa19.29■□□□□ 0.68
COMMD6-208ENST00000471682 ANKRD31Q8N7Z5 1873 aa19.28■□□□□ 0.68
COMMD6-208ENST00000471682 H0YIN7 160 aa19.28■□□□□ 0.68
COMMD6-208ENST00000471682 CASP7P55210 303 aa19.28■□□□□ 0.68
COMMD6-208ENST00000471682 PDE3AQ14432 1141 aa19.28■□□□□ 0.68
COMMD6-208ENST00000471682 FTSJ3Q8IY81 847 aaKnown RBP19.28■□□□□ 0.68
COMMD6-208ENST00000471682 C9orf78Q9NZ63 289 aaPredicted RBP19.28■□□□□ 0.68
COMMD6-208ENST00000471682 PDE8AO60658 829 aa19.27■□□□□ 0.68
COMMD6-208ENST00000471682 UBE3BQ7Z3V4 1068 aa19.27■□□□□ 0.68
COMMD6-208ENST00000471682 KLHL34Q8N239 644 aa19.27■□□□□ 0.68
COMMD6-208ENST00000471682 HDAC5Q9UQL6 1122 aa19.27■□□□□ 0.68
COMMD6-208ENST00000471682 SRGNP10124 158 aa19.26■□□□□ 0.67
COMMD6-208ENST00000471682 SF3B3Q15393 1217 aaKnown RBP19.26■□□□□ 0.67
COMMD6-208ENST00000471682 C2CD5Q86YS7 1000 aa19.26■□□□□ 0.67
COMMD6-208ENST00000471682 SYNE4Q8N205 404 aa19.26■□□□□ 0.67
COMMD6-208ENST00000471682 CCDC24Q8N4L8 307 aa19.26■□□□□ 0.67
COMMD6-208ENST00000471682 USP44Q9H0E7 712 aa19.26■□□□□ 0.67
COMMD6-208ENST00000471682 LAMB2P55268 1798 aa19.26■□□□□ 0.67
COMMD6-208ENST00000471682 HCLS1P14317 486 aaPredicted RBP19.25■□□□□ 0.67
COMMD6-208ENST00000471682 NPR1P16066 1061 aa19.25■□□□□ 0.67
COMMD6-208ENST00000471682 DPEP1P16444 411 aa19.25■□□□□ 0.67
COMMD6-208ENST00000471682 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
COMMD6-208ENST00000471682 STYK1Q6J9G0 422 aa19.25■□□□□ 0.67
COMMD6-208ENST00000471682 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
COMMD6-208ENST00000471682 MASTLQ96GX5 879 aa19.25■□□□□ 0.67
COMMD6-208ENST00000471682 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
COMMD6-208ENST00000471682 SRCAPQ6ZRS2 3230 aa19.25■□□□□ 0.67
COMMD6-208ENST00000471682 KCNA3P22001 575 aa19.24■□□□□ 0.67
COMMD6-208ENST00000471682 TMEM57Q8N5G2 664 aa19.24■□□□□ 0.67
COMMD6-208ENST00000471682 NLGN2Q8NFZ4 835 aa19.24■□□□□ 0.67
COMMD6-208ENST00000471682 DDX60Q8IY21 1712 aaKnown RBP19.24■□□□□ 0.67
COMMD6-208ENST00000471682 A0A0G2JLW4 131 aa19.23■□□□□ 0.67
COMMD6-208ENST00000471682 NBPF7P0C2Y1 421 aaPredicted RBP19.23■□□□□ 0.67
COMMD6-208ENST00000471682 RRP1P56182 461 aaKnown RBP19.23■□□□□ 0.67
COMMD6-208ENST00000471682 RTL5Q5HYW3 569 aaPredicted RBP19.23■□□□□ 0.67
COMMD6-208ENST00000471682 CNKSR1Q969H4 720 aa19.23■□□□□ 0.67
COMMD6-208ENST00000471682 PIM2Q9P1W9 311 aa19.23■□□□□ 0.67
COMMD6-208ENST00000471682 TNNQ9UQP3 1299 aa19.23■□□□□ 0.67
COMMD6-208ENST00000471682 DLEC1Q9Y238 1755 aa19.23■□□□□ 0.67
COMMD6-208ENST00000471682 TNRC6CQ9HCJ0 1690 aaKnown RBP19.23■□□□□ 0.67
COMMD6-208ENST00000471682 GNAI3P08754 354 aa19.22■□□□□ 0.67
COMMD6-208ENST00000471682 RLBP1P12271 317 aa19.22■□□□□ 0.67
COMMD6-208ENST00000471682 CHRNA5P30532 468 aa19.22■□□□□ 0.67
COMMD6-208ENST00000471682 ALDH1B1P30837 517 aa19.22■□□□□ 0.67
COMMD6-208ENST00000471682 CCDC152Q4G0S7 254 aa19.22■□□□□ 0.67
COMMD6-208ENST00000471682 RPGRQ92834 1020 aaKnown RBP19.22■□□□□ 0.67
COMMD6-208ENST00000471682 CRAMP1Q96RY5 1269 aa19.22■□□□□ 0.67
COMMD6-208ENST00000471682 CHMP4BQ9H444 224 aaKnown RBP19.22■□□□□ 0.67
COMMD6-208ENST00000471682 RTL9Q8NET4 1388 aa19.21■□□□□ 0.67
COMMD6-208ENST00000471682 CSF1RP07333 972 aa19.21■□□□□ 0.67
COMMD6-208ENST00000471682 CTSWP56202 376 aa19.21■□□□□ 0.67
COMMD6-208ENST00000471682 JARID2Q92833 1246 aaPredicted RBP19.21■□□□□ 0.67
COMMD6-208ENST00000471682 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
COMMD6-208ENST00000471682 PLIN1O60240 522 aa19.2■□□□□ 0.66
COMMD6-208ENST00000471682 UBTFL1P0CB47 393 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms