RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 MYO6Q9UM54 1294 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 RAD50Q92878 1312 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 G3V3G9 751 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 C8orf76Q96K31 380 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 CCDC196A0A1B0GTZ2 297 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
RRP1B-202ENST00000470886 MYL6BP14649 208 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 DDX11Q96FC9 970 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 AGLP35573 1532 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.44
RRP1B-202ENST00000470886 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.44
RRP1B-202ENST00000470886 PHAXQ9H814 394 aaKnown RBP12.27□□□□□ -0.44
RRP1B-202ENST00000470886 CFAP100Q494V2 611 aa12.27□□□□□ -0.45
RRP1B-202ENST00000470886 NEK1Q96PY6 1258 aa12.27□□□□□ -0.45
RRP1B-202ENST00000470886 CFAP65Q6ZU64 1925 aaKnown RBP12.27□□□□□ -0.45
RRP1B-202ENST00000470886 CHL1O00533 1208 aa12.27□□□□□ -0.45
RRP1B-202ENST00000470886 GDPD2Q9HCC8 539 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 MCM3P25205 808 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 VPS53Q5VIR6 699 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
RRP1B-202ENST00000470886 AMOTL2Q9Y2J4 779 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 FKBP4Q02790 459 aaKnown RBP eCLIP12.26□□□□□ -0.45
RRP1B-202ENST00000470886 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 IFIT1P09914 478 aaKnown RBP12.26□□□□□ -0.45
RRP1B-202ENST00000470886 CHMLP26374 656 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 NPHP3Q7Z494 1330 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 PTPRMP28827 1452 aa12.26□□□□□ -0.45
RRP1B-202ENST00000470886 ADGRB2O60241 1585 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 FSIP1Q8NA03 581 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 PHACTR3Q96KR7 559 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 NAP1L1P55209 391 aaKnown RBP12.25□□□□□ -0.45
RRP1B-202ENST00000470886 ATL3Q6DD88 541 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 TBX22Q9Y458 520 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 ZNF853P0CG23 659 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
RRP1B-202ENST00000470886 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 ARHGEF28Q8N1W1 1705 aaKnown RBP12.25□□□□□ -0.45
RRP1B-202ENST00000470886 PI4KAP2A4QPH2 592 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 HOXB7P09629 217 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 PI4KAP1Q8N8J0 262 aa12.25□□□□□ -0.45
RRP1B-202ENST00000470886 RRAGDQ9NQL2 400 aaPredicted RBP12.25□□□□□ -0.45
RRP1B-202ENST00000470886 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 CCDC8Q9H0W5 538 aaPredicted RBP12.24□□□□□ -0.45
RRP1B-202ENST00000470886 ATP2B1P20020 1258 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 CNPY2Q9Y2B0 182 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 MAP3K2Q9Y2U5 619 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 PLEKHG1Q9ULL1 1385 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 SSH2Q76I76 1423 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 BMS1Q14692 1282 aaKnown RBP12.24□□□□□ -0.45
RRP1B-202ENST00000470886 A2ML1A8K2U0 1454 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 NLRP1Q9C000 1473 aa12.24□□□□□ -0.45
RRP1B-202ENST00000470886 ARHGAP29Q52LW3 1261 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
RRP1B-202ENST00000470886 KANK3Q6NY19 840 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 C16orf71Q8IYS4 520 aaPredicted RBP12.23□□□□□ -0.45
RRP1B-202ENST00000470886 MYD88Q99836 296 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 PYM1Q9BRP8 204 aaKnown RBP12.23□□□□□ -0.45
RRP1B-202ENST00000470886 MSH6P52701 1360 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 CEP135Q66GS9 1140 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 CCAR1Q8IX12 1150 aaKnown RBP12.23□□□□□ -0.45
RRP1B-202ENST00000470886 ARHGEF40Q8TER5 1519 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 PREX1Q8TCU6 1659 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 EPS15P42566 896 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 GIMAP6Q6P9H5 292 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 CCDC148Q8NFR7 591 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 C16orf45Q96MC5 204 aaPredicted RBP12.23□□□□□ -0.45
RRP1B-202ENST00000470886 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
RRP1B-202ENST00000470886 KDM4AO75164 1064 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 CBX1P83916 185 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 KCNG4Q8TDN1 519 aa12.23□□□□□ -0.45
RRP1B-202ENST00000470886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.22□□□□□ -0.45
RRP1B-202ENST00000470886 PPP1R9BQ96SB3 815 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 KIF5CO60282 957 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 ZFYP08048 801 aaPredicted RBP12.22□□□□□ -0.45
RRP1B-202ENST00000470886 SNW1Q13573 536 aaKnown RBP12.22□□□□□ -0.45
RRP1B-202ENST00000470886 MAP9Q49MG5 647 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 CDK5RAP3Q96JB5 506 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 CASQ1P31415 396 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 RBM33Q96EV2 1170 aaKnown RBP12.22□□□□□ -0.45
RRP1B-202ENST00000470886 SRRTQ9BXP5 876 aaKnown RBP12.22□□□□□ -0.45
RRP1B-202ENST00000470886 ZNF213O14771 459 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
RRP1B-202ENST00000470886 ZGPATQ8N5A5 531 aaKnown RBP12.22□□□□□ -0.45
RRP1B-202ENST00000470886 TFIP11Q9UBB9 837 aaKnown RBP12.22□□□□□ -0.45
RRP1B-202ENST00000470886 LRRC7Q96NW7 1537 aa12.21□□□□□ -0.45
RRP1B-202ENST00000470886 TTF1Q15361 905 aaPredicted RBP12.21□□□□□ -0.45
RRP1B-202ENST00000470886 HSP90AB3PQ58FF7 597 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms