RNA–Protein interactions for RNA: ENST00000470880.6

CHL1-211, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-211ENST00000470880 DNAJC10Q8IXB1 793 aa8.41□□□□□ -1.06
CHL1-211ENST00000470880 ZC3H15Q8WU90 426 aaKnown RBP8.41□□□□□ -1.06
CHL1-211ENST00000470880 TSR2Q969E8 191 aaKnown RBP8.41□□□□□ -1.06
CHL1-211ENST00000470880 ZNF496Q96IT1 587 aaPredicted RBP8.41□□□□□ -1.06
CHL1-211ENST00000470880 TRPC6Q9Y210 931 aa8.41□□□□□ -1.06
CHL1-211ENST00000470880 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
CHL1-211ENST00000470880 ITGB4P16144 1822 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 ZBED9Q6R2W3 1325 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 FANCIQ9NVI1 1328 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 CHL1O00533 1208 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 KCNQ3O43525 872 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 PHF14O94880 888 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 EIF2S2P20042 333 aaKnown RBP8.4□□□□□ -1.06
CHL1-211ENST00000470880 EIF4A1P60842 406 aaKnown RBP8.4□□□□□ -1.06
CHL1-211ENST00000470880 HDGFL1Q5TGJ6 251 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 STK31Q9BXU1 1019 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.06
CHL1-211ENST00000470880 RTCBQ9Y3I0 505 aaKnown RBP8.4□□□□□ -1.06
CHL1-211ENST00000470880 DLG5Q8TDM6 1919 aa8.4□□□□□ -1.06
CHL1-211ENST00000470880 PAPPAQ13219 1627 aa8.4□□□□□ -1.07
CHL1-211ENST00000470880 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 CNTNAP4Q9C0A0 1308 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 ATMINO43313 823 aaPredicted RBP8.39□□□□□ -1.07
CHL1-211ENST00000470880 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
CHL1-211ENST00000470880 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
CHL1-211ENST00000470880 VEGFBP49765 207 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 E2F4Q16254 413 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 LINC00116Q8NCU8 138 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 FLAD1Q8NFF5 587 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 LRRC4BQ9NT99 713 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 TRIOBPQ9H2D6 2365 aa8.39□□□□□ -1.07
CHL1-211ENST00000470880 C10orf71Q711Q0 1435 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 SYNGAP1Q96PV0 1343 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 KAT6BQ8WYB5 2073 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 TTLL13PA6NNM8 815 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 ELL2O00472 640 aaPredicted RBP8.38□□□□□ -1.07
CHL1-211ENST00000470880 HOXB7P09629 217 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 POLD1P28340 1107 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 ITPK1Q13572 414 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 KCTD2Q14681 263 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 TWISTNBQ3B726 338 aaPredicted RBP8.38□□□□□ -1.07
CHL1-211ENST00000470880 DUSP27Q5VZP5 1158 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
CHL1-211ENST00000470880 NECTIN2Q92692 538 aa8.38□□□□□ -1.07
CHL1-211ENST00000470880 SOS1Q07889 1333 aaPredicted RBP8.37□□□□□ -1.07
CHL1-211ENST00000470880 A0A087WZG4 1122 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 TESPA1A2RU30 521 aaPredicted RBP8.37□□□□□ -1.07
CHL1-211ENST00000470880 SEMA3EO15041 775 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 ZNF853P0CG23 659 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 MYL6BP14649 208 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 SSFA2P28290 1259 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 RFC4P35249 363 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 ZNF827Q17R98 1081 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 TRAPPC3LQ5T215 181 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 CCDC30Q5VVM6 783 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 KIF6Q6ZMV9 814 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 FBXO22Q8NEZ5 403 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 RRAGCQ9HB90 399 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 ZBTB1Q9Y2K1 713 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 SIPA1L3O60292 1781 aaPredicted RBP8.37□□□□□ -1.07
CHL1-211ENST00000470880 KDM3BQ7LBC6 1761 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 LY75O60449 1722 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 C5P01031 1676 aa8.37□□□□□ -1.07
CHL1-211ENST00000470880 ERBB4Q15303 1308 aa8.36□□□□□ -1.07
CHL1-211ENST00000470880 ZNF521Q96K83 1311 aa8.36□□□□□ -1.07
CHL1-211ENST00000470880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.36□□□□□ -1.07
CHL1-211ENST00000470880 PRAMEF22A3QJZ6 481 aa8.36□□□□□ -1.07
CHL1-211ENST00000470880 ZPR1O75312 459 aa8.36□□□□□ -1.07
CHL1-211ENST00000470880 CYP19A1P11511 503 aaPredicted RBP8.36□□□□□ -1.07
CHL1-211ENST00000470880 ATN1P54259 1190 aaPredicted RBP8.36□□□□□ -1.07
CHL1-211ENST00000470880 EXOSC9Q06265 439 aaKnown RBP8.36□□□□□ -1.07
CHL1-211ENST00000470880 KRT24Q2M2I5 525 aa8.36□□□□□ -1.07
CHL1-211ENST00000470880 RC3H1Q5TC82 1133 aaKnown RBP8.36□□□□□ -1.07
CHL1-211ENST00000470880 SLC4A9Q96Q91 983 aa8.36□□□□□ -1.07
CHL1-211ENST00000470880 USP16Q9Y5T5 823 aa8.36□□□□□ -1.07
CHL1-211ENST00000470880 C4BP0C0L5 1744 aa8.36□□□□□ -1.07
CHL1-211ENST00000470880 COL15A1P39059 1388 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 COL24A1Q17RW2 1714 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 NPHP1O15259 732 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 POTEIP0CG38 1075 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 IL6STP40189 918 aaPredicted RBP8.35□□□□□ -1.07
CHL1-211ENST00000470880 SLFN5Q08AF3 891 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 EFCAB3Q8N7B9 438 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 CDCA7LQ96GN5 454 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 DBF4Q9UBU7 674 aaPredicted RBP8.35□□□□□ -1.07
CHL1-211ENST00000470880 UBR2Q8IWV8 1755 aa8.35□□□□□ -1.07
CHL1-211ENST00000470880 TJP1Q07157 1748 aa8.34□□□□□ -1.07
CHL1-211ENST00000470880 CASP8AP2Q9UKL3 1982 aa8.34□□□□□ -1.07
CHL1-211ENST00000470880 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
CHL1-211ENST00000470880 A1BGP04217 495 aa8.34□□□□□ -1.07
CHL1-211ENST00000470880 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
CHL1-211ENST00000470880 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
CHL1-211ENST00000470880 C8orf58Q8NAV2 365 aa8.34□□□□□ -1.07
CHL1-211ENST00000470880 SLC39A7Q92504 469 aa8.34□□□□□ -1.07
CHL1-211ENST00000470880 SLC24A3Q9HC58 644 aa8.34□□□□□ -1.07
CHL1-211ENST00000470880 CHPF2Q9P2E5 772 aa8.34□□□□□ -1.07
CHL1-211ENST00000470880 ZNF652Q9Y2D9 606 aa8.34□□□□□ -1.07
CHL1-211ENST00000470880 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms