RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 BACH2Q9BYV9 841 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 CWC25Q9NXE8 425 aaPredicted RBP10.37□□□□□ -0.75
GTF3A-206ENST00000470606 CCNL1Q9UK58 526 aaPredicted RBP10.37□□□□□ -0.75
GTF3A-206ENST00000470606 BCORQ6W2J9 1755 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 CNTNAP4Q9C0A0 1308 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 RFX5P48382 616 aaPredicted RBP10.37□□□□□ -0.75
GTF3A-206ENST00000470606 RABL6Q3YEC7 729 aaPredicted RBP10.37□□□□□ -0.75
GTF3A-206ENST00000470606 NLRP10Q86W26 655 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 PLEKHM2Q8IWE5 1019 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 BCL11AQ9H165 835 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
GTF3A-206ENST00000470606 C4BP0C0L5 1744 aa10.36□□□□□ -0.75
GTF3A-206ENST00000470606 ERVV-1B6SEH8 477 aa10.36□□□□□ -0.75
GTF3A-206ENST00000470606 RXRBP28702 533 aa10.36□□□□□ -0.75
GTF3A-206ENST00000470606 ZNF34Q8IZ26 560 aa10.36□□□□□ -0.75
GTF3A-206ENST00000470606 FAM89AQ96GI7 184 aa10.36□□□□□ -0.75
GTF3A-206ENST00000470606 NOP58Q9Y2X3 529 aaKnown RBP10.36□□□□□ -0.75
GTF3A-206ENST00000470606 SALL3Q9BXA9 1300 aa10.36□□□□□ -0.75
GTF3A-206ENST00000470606 SURF6O75683 361 aaKnown RBP10.35□□□□□ -0.75
GTF3A-206ENST00000470606 ILDR2Q71H61 639 aa10.35□□□□□ -0.75
GTF3A-206ENST00000470606 C4AP0C0L4 1744 aa10.35□□□□□ -0.75
GTF3A-206ENST00000470606 TUBGCP6Q96RT7 1819 aa10.35□□□□□ -0.75
GTF3A-206ENST00000470606 SEC24BO95487 1268 aa10.35□□□□□ -0.75
GTF3A-206ENST00000470606 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
GTF3A-206ENST00000470606 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
GTF3A-206ENST00000470606 MYH3P11055 1940 aa10.34□□□□□ -0.75
GTF3A-206ENST00000470606 GSPT1P15170 499 aaKnown RBP10.34□□□□□ -0.75
GTF3A-206ENST00000470606 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
GTF3A-206ENST00000470606 LMBR1LQ6UX01 489 aa10.34□□□□□ -0.75
GTF3A-206ENST00000470606 IL1RAPL2Q9NP60 686 aa10.34□□□□□ -0.75
GTF3A-206ENST00000470606 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
GTF3A-206ENST00000470606 GNPATO15228 680 aa10.33□□□□□ -0.76
GTF3A-206ENST00000470606 RPS6KA4O75676 772 aa10.33□□□□□ -0.76
GTF3A-206ENST00000470606 SASH1O94885 1247 aa10.33□□□□□ -0.76
GTF3A-206ENST00000470606 PCCAP05165 728 aaPredicted RBP10.33□□□□□ -0.76
GTF3A-206ENST00000470606 PTPN12Q05209 780 aaKnown RBP10.33□□□□□ -0.76
GTF3A-206ENST00000470606 SUSD4Q5VX71 490 aa10.33□□□□□ -0.76
GTF3A-206ENST00000470606 TSHZ3Q63HK5 1081 aa10.33□□□□□ -0.76
GTF3A-206ENST00000470606 ZBTB38Q8NAP3 1195 aaPredicted RBP10.33□□□□□ -0.76
GTF3A-206ENST00000470606 RHPN1Q8TCX5 695 aa10.33□□□□□ -0.76
GTF3A-206ENST00000470606 LRRCC1Q9C099 1032 aa10.33□□□□□ -0.76
GTF3A-206ENST00000470606 SRP68Q9UHB9 627 aaKnown RBP10.33□□□□□ -0.76
GTF3A-206ENST00000470606 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
GTF3A-206ENST00000470606 TNS1Q9HBL0 1735 aaKnown RBP10.32□□□□□ -0.76
GTF3A-206ENST00000470606 DDX60Q8IY21 1712 aaKnown RBP10.32□□□□□ -0.76
GTF3A-206ENST00000470606 SIL1Q9H173 461 aa10.32□□□□□ -0.76
GTF3A-206ENST00000470606 COPRSQ9NQ92 184 aa10.32□□□□□ -0.76
GTF3A-206ENST00000470606 HSP90AB3PQ58FF7 597 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 ARHGEF1Q92888 912 aaKnown RBP10.31□□□□□ -0.76
GTF3A-206ENST00000470606 PLA2G12BQ9BX93 195 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 HDAC5Q9UQL6 1122 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 COL4A1P02462 1669 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 RAB11FIP3O75154 756 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 CSF1RP07333 972 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 PDE1AP54750 535 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 BMP2KLQ5H9B9 411 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 NUTM1Q86Y26 1132 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 ZNF594Q96JF6 807 aaPredicted RBP10.31□□□□□ -0.76
GTF3A-206ENST00000470606 CCDC85AQ96PX6 553 aaPredicted RBP10.31□□□□□ -0.76
GTF3A-206ENST00000470606 NARFQ9UHQ1 456 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
GTF3A-206ENST00000470606 CDHR2Q9BYE9 1310 aa10.31□□□□□ -0.76
GTF3A-206ENST00000470606 TAF1P21675 1872 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 FAM177BA6PVY3 158 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 NTSR2O95665 410 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 TXNRD1Q16881 649 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 TBC1D9BQ66K14 1250 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 ATG9AQ7Z3C6 839 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 NPM2Q86SE8 214 aaKnown RBP10.3□□□□□ -0.76
GTF3A-206ENST00000470606 TTLL11Q8NHH1 800 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 KIF1BPQ96EK5 621 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 OSBPL3Q9H4L5 887 aa10.3□□□□□ -0.76
GTF3A-206ENST00000470606 NIP7Q9Y221 180 aaKnown RBP eCLIP10.3□□□□□ -0.76
GTF3A-206ENST00000470606 IRS4O14654 1257 aaPredicted RBP10.29□□□□□ -0.76
GTF3A-206ENST00000470606 PHF14O94880 888 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 HCLS1P14317 486 aaPredicted RBP10.29□□□□□ -0.76
GTF3A-206ENST00000470606 TTC22Q5TAA0 569 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 CLEC4GQ6UXB4 293 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 EAF2Q96CJ1 260 aaPredicted RBP10.29□□□□□ -0.76
GTF3A-206ENST00000470606 PUS3Q9BZE2 481 aaKnown RBP10.29□□□□□ -0.76
GTF3A-206ENST00000470606 RTCBQ9Y3I0 505 aaKnown RBP10.29□□□□□ -0.76
GTF3A-206ENST00000470606 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 APBA3O96018 575 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 LRRC24Q50LG9 513 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 SLC27A3Q5K4L6 730 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 GREM2Q9H772 168 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 TLR7Q9NYK1 1049 aaKnown RBP10.29□□□□□ -0.76
GTF3A-206ENST00000470606 STAP2Q9UGK3 403 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 CHMP3Q9Y3E7 222 aa10.29□□□□□ -0.76
GTF3A-206ENST00000470606 GOLGB1Q14789 3259 aaKnown RBP10.29□□□□□ -0.76
GTF3A-206ENST00000470606 LAMB2P55268 1798 aa10.28□□□□□ -0.76
GTF3A-206ENST00000470606 USP42Q9H9J4 1324 aaKnown RBP10.28□□□□□ -0.76
GTF3A-206ENST00000470606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.28□□□□□ -0.76
GTF3A-206ENST00000470606 PLSCR1O15162 318 aa10.28□□□□□ -0.76
GTF3A-206ENST00000470606 MX1P20591 662 aa10.28□□□□□ -0.76
GTF3A-206ENST00000470606 ZNF827Q17R98 1081 aa10.28□□□□□ -0.76
GTF3A-206ENST00000470606 BICDL1Q6ZP65 573 aa10.28□□□□□ -0.76
GTF3A-206ENST00000470606 C3orf67Q6ZVT6 689 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms