RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 FAM89AQ96GI7 184 aa12.03□□□□□ -0.48
SHROOM3-203ENST00000469923 MRS2Q9HD23 443 aa12.03□□□□□ -0.48
SHROOM3-203ENST00000469923 CCDC88AQ3V6T2 1871 aa12.03□□□□□ -0.48
SHROOM3-203ENST00000469923 ZNF541Q9H0D2 1346 aa12.03□□□□□ -0.48
SHROOM3-203ENST00000469923 CACNA1SQ13698 1873 aa12.02□□□□□ -0.48
SHROOM3-203ENST00000469923 WTIPA6NIX2 430 aaPredicted RBP12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 HSPA6P17066 643 aa12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 HOXA10P31260 410 aaPredicted RBP12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 WWC1Q8IX03 1113 aa12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 DNAJC5GQ8N7S2 189 aa12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 COL4A1P02462 1669 aa12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 COL4A5P29400 1685 aa12.02□□□□□ -0.49
SHROOM3-203ENST00000469923 TOMM70O94826 608 aa12.01□□□□□ -0.49
SHROOM3-203ENST00000469923 ANKRD13DQ6ZTN6 518 aa12.01□□□□□ -0.49
SHROOM3-203ENST00000469923 ISCA1Q9BUE6 129 aa12.01□□□□□ -0.49
SHROOM3-203ENST00000469923 TAOK3Q9H2K8 898 aa12.01□□□□□ -0.49
SHROOM3-203ENST00000469923 TRMT112Q9UI30 125 aaKnown RBP12.01□□□□□ -0.49
SHROOM3-203ENST00000469923 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.49
SHROOM3-203ENST00000469923 FAM9BQ8IZU0 186 aa12□□□□□ -0.49
SHROOM3-203ENST00000469923 GPR101Q96P66 508 aaPredicted RBP12□□□□□ -0.49
SHROOM3-203ENST00000469923 IFT57Q9NWB7 429 aa12□□□□□ -0.49
SHROOM3-203ENST00000469923 ERBB4Q15303 1308 aa12□□□□□ -0.49
SHROOM3-203ENST00000469923 DLEC1Q9Y238 1755 aa12□□□□□ -0.49
SHROOM3-203ENST00000469923 TAF1P21675 1872 aa12□□□□□ -0.49
SHROOM3-203ENST00000469923 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
SHROOM3-203ENST00000469923 CCDC85AQ96PX6 553 aaPredicted RBP11.99□□□□□ -0.49
SHROOM3-203ENST00000469923 NYXQ9GZU5 481 aa11.99□□□□□ -0.49
SHROOM3-203ENST00000469923 ABCC4O15439 1325 aa11.99□□□□□ -0.49
SHROOM3-203ENST00000469923 SNED1Q8TER0 1413 aa11.99□□□□□ -0.49
SHROOM3-203ENST00000469923 LAMB4A4D0S4 1761 aa11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 RGL2O15211 777 aa11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 GNAI1P63096 354 aa11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 CCDC93Q567U6 631 aa11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 PLBD2Q8NHP8 589 aa11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 CELF1Q92879 486 aaKnown RBP11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 MYD88Q99836 296 aa11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 SEC31BQ9NQW1 1179 aa11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 KCNQ5Q9NR82 932 aa11.98□□□□□ -0.49
SHROOM3-203ENST00000469923 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 SHTN1A0MZ66 631 aa11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 ANP32CO43423 234 aa11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 VEGFAP15692 232 aaPredicted RBP11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 PPP1R42Q7Z4L9 355 aa11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 RBM46Q8TBY0 533 aaKnown RBP11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 RPGRQ92834 1020 aaKnown RBP11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 RBM17Q96I25 401 aaKnown RBP11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 NLRP3Q96P20 1036 aa11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 CRAMP1Q96RY5 1269 aa11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 DBF4Q9UBU7 674 aaPredicted RBP11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 PDZRN3Q9UPQ7 1066 aa11.97□□□□□ -0.49
SHROOM3-203ENST00000469923 KDM2BQ8NHM5 1336 aa11.96□□□□□ -0.49
SHROOM3-203ENST00000469923 LTBP3Q9NS15 1303 aa11.96□□□□□ -0.49
SHROOM3-203ENST00000469923 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.49
SHROOM3-203ENST00000469923 IGKV5-2P06315 115 aa11.96□□□□□ -0.49
SHROOM3-203ENST00000469923 IARSP41252 1262 aaKnown RBP11.96□□□□□ -0.49
SHROOM3-203ENST00000469923 PARP10Q53GL7 1025 aa11.96□□□□□ -0.49
SHROOM3-203ENST00000469923 DLK2Q6UY11 383 aa11.96□□□□□ -0.49
SHROOM3-203ENST00000469923 HYPKQ9NX55 129 aa11.96□□□□□ -0.49
SHROOM3-203ENST00000469923 FZD9O00144 591 aa11.95□□□□□ -0.5
SHROOM3-203ENST00000469923 EXOSC9Q06265 439 aaKnown RBP11.95□□□□□ -0.5
SHROOM3-203ENST00000469923 AOC3Q16853 763 aa11.95□□□□□ -0.5
SHROOM3-203ENST00000469923 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
SHROOM3-203ENST00000469923 GJA3Q9Y6H8 435 aa11.95□□□□□ -0.5
SHROOM3-203ENST00000469923 SH3TC1Q8TE82 1336 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 PI4KAP2A4QPH2 592 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 VAMP4O75379 141 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 EPS15P42566 896 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 CWF19L2Q2TBE0 894 aaKnown RBP11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 C16orf71Q8IYS4 520 aaPredicted RBP11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 RTKN2Q8IZC4 609 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 PI4KAP1Q8N8J0 262 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 MAP3K2Q9Y2U5 619 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 ATP6V0A2Q9Y487 856 aa11.94□□□□□ -0.5
SHROOM3-203ENST00000469923 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
SHROOM3-203ENST00000469923 IRS4O14654 1257 aaPredicted RBP11.93□□□□□ -0.5
SHROOM3-203ENST00000469923 HOXB7P09629 217 aa11.93□□□□□ -0.5
SHROOM3-203ENST00000469923 GPSM2P81274 684 aa11.93□□□□□ -0.5
SHROOM3-203ENST00000469923 IFFO2Q5TF58 517 aa11.93□□□□□ -0.5
SHROOM3-203ENST00000469923 TAF1DQ9H5J8 278 aaPredicted RBP11.93□□□□□ -0.5
SHROOM3-203ENST00000469923 POLLQ9UGP5 575 aa11.93□□□□□ -0.5
SHROOM3-203ENST00000469923 FANCIQ9NVI1 1328 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 YDJCA8MPS7 323 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 F6X3S4 739 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 TRIM28Q13263 835 aaKnown RBP11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 CCDC27Q2M243 656 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 TWISTNBQ3B726 338 aaPredicted RBP11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 DPY19L2Q6NUT2 758 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 SP8Q8IXZ3 490 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 PSMD1Q99460 953 aa11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 METTL22Q9BUU2 404 aaPredicted RBP11.92□□□□□ -0.5
SHROOM3-203ENST00000469923 RAD17O75943 681 aa11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 CXCL9Q07325 125 aa11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 GRAPQ13588 217 aa11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms