RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-208ENST00000469882 MRS2Q9HD23 443 aa14.65□□□□□ -0.06
FXR1-208ENST00000469882 SNED1Q8TER0 1413 aa14.65□□□□□ -0.06
FXR1-208ENST00000469882 PPP1R42Q7Z4L9 355 aa14.64□□□□□ -0.07
FXR1-208ENST00000469882 SLC51AQ86UW1 340 aa14.64□□□□□ -0.07
FXR1-208ENST00000469882 CCDC93Q567U6 631 aa14.63□□□□□ -0.07
FXR1-208ENST00000469882 NLRP10Q86W26 655 aa14.63□□□□□ -0.07
FXR1-208ENST00000469882 UTP14AQ9BVJ6 771 aaKnown RBP14.63□□□□□ -0.07
FXR1-208ENST00000469882 RRAGCQ9HB90 399 aa14.63□□□□□ -0.07
FXR1-208ENST00000469882 DBF4Q9UBU7 674 aaPredicted RBP14.63□□□□□ -0.07
FXR1-208ENST00000469882 GLTPD2A6NH11 291 aa14.62□□□□□ -0.07
FXR1-208ENST00000469882 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
FXR1-208ENST00000469882 TOMM70O94826 608 aa14.62□□□□□ -0.07
FXR1-208ENST00000469882 ALDH1B1P30837 517 aa14.62□□□□□ -0.07
FXR1-208ENST00000469882 HOXA10P31260 410 aaPredicted RBP14.62□□□□□ -0.07
FXR1-208ENST00000469882 TCIRG1Q13488 830 aa14.62□□□□□ -0.07
FXR1-208ENST00000469882 HSP90AB3PQ58FF7 597 aa14.62□□□□□ -0.07
FXR1-208ENST00000469882 DDX60Q8IY21 1712 aaKnown RBP14.62□□□□□ -0.07
FXR1-208ENST00000469882 C8orf58Q8NAV2 365 aa14.62□□□□□ -0.07
FXR1-208ENST00000469882 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
FXR1-208ENST00000469882 WDR90Q96KV7 1748 aa14.62□□□□□ -0.07
FXR1-208ENST00000469882 HSPA6P17066 643 aa14.61□□□□□ -0.07
FXR1-208ENST00000469882 CCDC27Q2M243 656 aa14.61□□□□□ -0.07
FXR1-208ENST00000469882 WWC1Q8IX03 1113 aa14.61□□□□□ -0.07
FXR1-208ENST00000469882 SYNE4Q8N205 404 aa14.61□□□□□ -0.07
FXR1-208ENST00000469882 PLBD2Q8NHP8 589 aa14.61□□□□□ -0.07
FXR1-208ENST00000469882 TSR2Q969E8 191 aaKnown RBP14.61□□□□□ -0.07
FXR1-208ENST00000469882 ZNF428Q96B54 188 aa14.61□□□□□ -0.07
FXR1-208ENST00000469882 ZNF277Q9NRM2 450 aaPredicted RBP14.61□□□□□ -0.07
FXR1-208ENST00000469882 HYPKQ9NX55 129 aa14.61□□□□□ -0.07
FXR1-208ENST00000469882 FKBP4Q02790 459 aaKnown RBP eCLIP14.6□□□□□ -0.07
FXR1-208ENST00000469882 SLC10A5Q5PT55 438 aa14.6□□□□□ -0.07
FXR1-208ENST00000469882 TSPYL6Q8N831 410 aa14.6□□□□□ -0.07
FXR1-208ENST00000469882 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
FXR1-208ENST00000469882 RNF123Q5XPI4 1314 aa14.6□□□□□ -0.07
FXR1-208ENST00000469882 COL4A5P29400 1685 aa14.59□□□□□ -0.07
FXR1-208ENST00000469882 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
FXR1-208ENST00000469882 ANKRD13DQ6ZTN6 518 aa14.59□□□□□ -0.07
FXR1-208ENST00000469882 C16orf71Q8IYS4 520 aaPredicted RBP14.59□□□□□ -0.07
FXR1-208ENST00000469882 RTKN2Q8IZC4 609 aa14.59□□□□□ -0.07
FXR1-208ENST00000469882 RBM17Q96I25 401 aaKnown RBP14.59□□□□□ -0.07
FXR1-208ENST00000469882 PHAXQ9H814 394 aaKnown RBP14.59□□□□□ -0.07
FXR1-208ENST00000469882 TRMT112Q9UI30 125 aaKnown RBP14.59□□□□□ -0.07
FXR1-208ENST00000469882 ATP5J2-PTCD1G3V325 749 aa14.58□□□□□ -0.08
FXR1-208ENST00000469882 PPEF1O14829 653 aaPredicted RBP14.58□□□□□ -0.08
FXR1-208ENST00000469882 NLRP3Q96P20 1036 aa14.58□□□□□ -0.08
FXR1-208ENST00000469882 CRAMP1Q96RY5 1269 aa14.58□□□□□ -0.08
FXR1-208ENST00000469882 ISCA1Q9BUE6 129 aa14.58□□□□□ -0.08
FXR1-208ENST00000469882 ABCC4O15439 1325 aa14.58□□□□□ -0.08
FXR1-208ENST00000469882 SH3TC1Q8TE82 1336 aa14.58□□□□□ -0.08
FXR1-208ENST00000469882 TAF1P21675 1872 aa14.57□□□□□ -0.08
FXR1-208ENST00000469882 POTECB2RU33 542 aa14.57□□□□□ -0.08
FXR1-208ENST00000469882 ZNF541Q9H0D2 1346 aa14.57□□□□□ -0.08
FXR1-208ENST00000469882 COL4A1P02462 1669 aa14.56□□□□□ -0.08
FXR1-208ENST00000469882 TCERG1O14776 1098 aaKnown RBP14.56□□□□□ -0.08
FXR1-208ENST00000469882 VEGFAP15692 232 aaPredicted RBP14.56□□□□□ -0.08
FXR1-208ENST00000469882 GOLGA2Q08379 1002 aa14.56□□□□□ -0.08
FXR1-208ENST00000469882 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
FXR1-208ENST00000469882 PSMD1Q99460 953 aa14.56□□□□□ -0.08
FXR1-208ENST00000469882 IL16Q14005 1332 aa14.56□□□□□ -0.08
FXR1-208ENST00000469882 DDNO94850 711 aaPredicted RBP14.55□□□□□ -0.08
FXR1-208ENST00000469882 IARSP41252 1262 aaKnown RBP14.55□□□□□ -0.08
FXR1-208ENST00000469882 CCDC30Q5VVM6 783 aa14.55□□□□□ -0.08
FXR1-208ENST00000469882 DPY19L2Q6NUT2 758 aa14.55□□□□□ -0.08
FXR1-208ENST00000469882 FAM89AQ96GI7 184 aa14.55□□□□□ -0.08
FXR1-208ENST00000469882 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
FXR1-208ENST00000469882 LRRC37AA6NMS7 1700 aa14.55□□□□□ -0.08
FXR1-208ENST00000469882 PCNTO95613 3336 aa14.54□□□□□ -0.08
FXR1-208ENST00000469882 FSTL1Q12841 308 aa14.54□□□□□ -0.08
FXR1-208ENST00000469882 CC2D2BQ6DHV5 1058 aa14.54□□□□□ -0.08
FXR1-208ENST00000469882 RIC3Q7Z5B4 369 aa14.54□□□□□ -0.08
FXR1-208ENST00000469882 FANCIQ9NVI1 1328 aa14.54□□□□□ -0.08
FXR1-208ENST00000469882 TRIM28Q13263 835 aaKnown RBP14.53□□□□□ -0.08
FXR1-208ENST00000469882 RTL5Q5HYW3 569 aaPredicted RBP14.53□□□□□ -0.08
FXR1-208ENST00000469882 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
FXR1-208ENST00000469882 MYD88Q99836 296 aa14.53□□□□□ -0.08
FXR1-208ENST00000469882 ATP6V0A2Q9Y487 856 aa14.53□□□□□ -0.08
FXR1-208ENST00000469882 SCN4AP35499 1836 aa14.52□□□□□ -0.08
FXR1-208ENST00000469882 DUOX1Q9NRD9 1551 aa14.52□□□□□ -0.08
FXR1-208ENST00000469882 FZD9O00144 591 aa14.52□□□□□ -0.09
FXR1-208ENST00000469882 APLP1P51693 650 aa14.52□□□□□ -0.09
FXR1-208ENST00000469882 GRAPQ13588 217 aa14.52□□□□□ -0.09
FXR1-208ENST00000469882 TWISTNBQ3B726 338 aaPredicted RBP14.52□□□□□ -0.09
FXR1-208ENST00000469882 SMC1BQ8NDV3 1235 aa14.52□□□□□ -0.09
FXR1-208ENST00000469882 GRAPLQ8TC17 118 aaPredicted RBP14.52□□□□□ -0.09
FXR1-208ENST00000469882 L3MBTL3Q96JM7 780 aaPredicted RBP14.52□□□□□ -0.09
FXR1-208ENST00000469882 GRIPAP1Q4V328 841 aa14.51□□□□□ -0.09
FXR1-208ENST00000469882 DDX46Q7L014 1031 aaKnown RBP14.51□□□□□ -0.09
FXR1-208ENST00000469882 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
FXR1-208ENST00000469882 IRS4O14654 1257 aaPredicted RBP14.5□□□□□ -0.09
FXR1-208ENST00000469882 BBOX1O75936 387 aa14.5□□□□□ -0.09
FXR1-208ENST00000469882 DDX58O95786 925 aaKnown RBP14.5□□□□□ -0.09
FXR1-208ENST00000469882 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
FXR1-208ENST00000469882 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
FXR1-208ENST00000469882 HTRA3P83110 453 aa14.5□□□□□ -0.09
FXR1-208ENST00000469882 G2E3Q7L622 706 aa14.5□□□□□ -0.09
FXR1-208ENST00000469882 WDR63Q8IWG1 891 aa14.5□□□□□ -0.09
FXR1-208ENST00000469882 ZBTB38Q8NAP3 1195 aaPredicted RBP14.5□□□□□ -0.09
FXR1-208ENST00000469882 METTL22Q9BUU2 404 aaPredicted RBP14.5□□□□□ -0.09
FXR1-208ENST00000469882 STK31Q9BXU1 1019 aa14.5□□□□□ -0.09
FXR1-208ENST00000469882 CHMP4AQ9BY43 222 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms