RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ABCC6O95255 1503 aa17.71■□□□□ 0.43
CBWD3-205ENST00000469687 LARGE1O95461 756 aa17.71■□□□□ 0.43
CBWD3-205ENST00000469687 NASPP49321 788 aaPredicted RBP17.71■□□□□ 0.43
CBWD3-205ENST00000469687 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
CBWD3-205ENST00000469687 FMNL2Q96PY5 1086 aa17.71■□□□□ 0.43
CBWD3-205ENST00000469687 CABP4P57796 275 aa17.7■□□□□ 0.42
CBWD3-205ENST00000469687 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-205ENST00000469687 COL9A3Q14050 684 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-205ENST00000469687 GDPD2Q9HCC8 539 aa17.7■□□□□ 0.42
CBWD3-205ENST00000469687 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-205ENST00000469687 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
CBWD3-205ENST00000469687 UBE3BQ7Z3V4 1068 aa17.7■□□□□ 0.42
CBWD3-205ENST00000469687 ERBB4Q15303 1308 aa17.7■□□□□ 0.42
CBWD3-205ENST00000469687 EDC3Q96F86 508 aaKnown RBP17.69■□□□□ 0.42
CBWD3-205ENST00000469687 JAKMIP1Q96N16 626 aaKnown RBP17.69■□□□□ 0.42
CBWD3-205ENST00000469687 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
CBWD3-205ENST00000469687 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
CBWD3-205ENST00000469687 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-205ENST00000469687 RFX5P48382 616 aaPredicted RBP17.68■□□□□ 0.42
CBWD3-205ENST00000469687 NECTIN1Q15223 517 aa17.68■□□□□ 0.42
CBWD3-205ENST00000469687 RBSNQ9H1K0 784 aa17.68■□□□□ 0.42
CBWD3-205ENST00000469687 LIMCH1Q9UPQ0 1083 aa17.68■□□□□ 0.42
CBWD3-205ENST00000469687 CPDO75976 1380 aa17.68■□□□□ 0.42
CBWD3-205ENST00000469687 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
CBWD3-205ENST00000469687 RBM8AQ9Y5S9 174 aaKnown RBP17.67■□□□□ 0.42
CBWD3-205ENST00000469687 NDUFB9Q9Y6M9 179 aa17.67■□□□□ 0.42
CBWD3-205ENST00000469687 PTPN12Q05209 780 aaKnown RBP17.67■□□□□ 0.42
CBWD3-205ENST00000469687 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
CBWD3-205ENST00000469687 FSD1Q9BTV5 496 aa17.67■□□□□ 0.42
CBWD3-205ENST00000469687 SYCE3A1L190 88 aa17.66■□□□□ 0.42
CBWD3-205ENST00000469687 GADD45BO75293 160 aaPredicted RBP17.66■□□□□ 0.42
CBWD3-205ENST00000469687 KCNB2Q92953 911 aa17.66■□□□□ 0.42
CBWD3-205ENST00000469687 A0A087WZG4 1122 aa17.66■□□□□ 0.42
CBWD3-205ENST00000469687 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
CBWD3-205ENST00000469687 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
CBWD3-205ENST00000469687 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
CBWD3-205ENST00000469687 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
CBWD3-205ENST00000469687 COPRSQ9NQ92 184 aa17.66■□□□□ 0.42
CBWD3-205ENST00000469687 DBNLQ9UJU6 430 aaKnown RBP17.66■□□□□ 0.42
CBWD3-205ENST00000469687 TAF6LQ9Y6J9 622 aa17.66■□□□□ 0.42
CBWD3-205ENST00000469687 PARP4Q9UKK3 1724 aaKnown RBP17.66■□□□□ 0.42
CBWD3-205ENST00000469687 WDR33Q9C0J8 1336 aaKnown RBP17.66■□□□□ 0.42
CBWD3-205ENST00000469687 CHGBP05060 677 aa17.65■□□□□ 0.42
CBWD3-205ENST00000469687 TFCP2Q12800 502 aa17.65■□□□□ 0.42
CBWD3-205ENST00000469687 CREB3L3Q68CJ9 461 aa17.65■□□□□ 0.42
CBWD3-205ENST00000469687 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-205ENST00000469687 ZSWIM6Q9HCJ5 1215 aa17.65■□□□□ 0.42
CBWD3-205ENST00000469687 PDRG1Q9NUG6 133 aa17.65■□□□□ 0.42
CBWD3-205ENST00000469687 CASP7P55210 303 aa17.64■□□□□ 0.42
CBWD3-205ENST00000469687 ST3GAL1Q11201 340 aa17.64■□□□□ 0.42
CBWD3-205ENST00000469687 CCDC83Q8IWF9 413 aa17.64■□□□□ 0.42
CBWD3-205ENST00000469687 MAP4K1Q92918 833 aa17.64■□□□□ 0.42
CBWD3-205ENST00000469687 KCNJ4P48050 445 aa17.64■□□□□ 0.41
CBWD3-205ENST00000469687 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.41
CBWD3-205ENST00000469687 PRDM11Q9NQV5 511 aa17.64■□□□□ 0.41
CBWD3-205ENST00000469687 SYT1P21579 422 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 TNNI3KQ59H18 835 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 VPS53Q5VIR6 699 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 TTLL7Q6ZT98 887 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 TOM1L2Q6ZVM7 507 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 USP48Q86UV5 1035 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 TRIM44Q96DX7 344 aaPredicted RBP17.63■□□□□ 0.41
CBWD3-205ENST00000469687 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 FPGT-TNNI3KV9GXZ4 949 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 MED23Q9ULK4 1368 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 SLC27A2O14975 620 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 MBD3O95983 291 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 PLBD2Q8NHP8 589 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 SMC3Q9UQE7 1217 aa17.63■□□□□ 0.41
CBWD3-205ENST00000469687 WDR17Q8IZU2 1322 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 ESPNB1AK53 854 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 STX6O43752 255 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 ME3Q16798 604 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 LRSAM1Q6UWE0 723 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 TCEANC2Q96MN5 208 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 TM6SF1Q9BZW5 370 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 SNRKQ9NRH2 765 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 COL15A1P39059 1388 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 HIP1O00291 1037 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 A1BGP04217 495 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 ZSCAN22P10073 491 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-205ENST00000469687 CLCN1P35523 988 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 NECAB1Q8N987 351 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
CBWD3-205ENST00000469687 DBNDD2Q9BQY9 259 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 CNPY2Q9Y2B0 182 aa17.62■□□□□ 0.41
CBWD3-205ENST00000469687 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
CBWD3-205ENST00000469687 NUP188Q5SRE5 1749 aa17.61■□□□□ 0.41
CBWD3-205ENST00000469687 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
CBWD3-205ENST00000469687 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
CBWD3-205ENST00000469687 GJB2P29033 226 aa17.61■□□□□ 0.41
CBWD3-205ENST00000469687 TPRNQ4KMQ1 711 aa17.61■□□□□ 0.41
CBWD3-205ENST00000469687 LMBR1LQ6UX01 489 aa17.61■□□□□ 0.41
CBWD3-205ENST00000469687 TPCN1Q9ULQ1 816 aa17.61■□□□□ 0.41
CBWD3-205ENST00000469687 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
CBWD3-205ENST00000469687 PCDH11XQ9BZA7 1347 aa17.61■□□□□ 0.41
CBWD3-205ENST00000469687 PCDH11YQ9BZA8 1340 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms