RNA–Protein interactions for RNA: ENST00000469404.1

NCK1-204, Transcript of NCK adaptor protein 1, humanhuman

TSL 2 BASIC

Gene NCK1, Length 2,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-204ENST00000469404 HLFQ16534 295 aa5.65□□□□□ -1.5
NCK1-204ENST00000469404 DZIP3Q86Y13 1208 aaKnown RBP5.65□□□□□ -1.5
NCK1-204ENST00000469404 SMARCC1Q92922 1105 aaPredicted RBP5.65□□□□□ -1.5
NCK1-204ENST00000469404 KIF16BQ96L93 1317 aa5.65□□□□□ -1.5
NCK1-204ENST00000469404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.65□□□□□ -1.51
NCK1-204ENST00000469404 MAP3K13O43283 966 aa5.65□□□□□ -1.51
NCK1-204ENST00000469404 ZNF827Q17R98 1081 aa5.65□□□□□ -1.51
NCK1-204ENST00000469404 KIF6Q6ZMV9 814 aa5.65□□□□□ -1.51
NCK1-204ENST00000469404 SYNE4Q8N205 404 aa5.65□□□□□ -1.51
NCK1-204ENST00000469404 TSPYL2Q9H2G4 693 aaPredicted RBP5.65□□□□□ -1.51
NCK1-204ENST00000469404 ANO8Q9HCE9 1232 aaPredicted RBP5.65□□□□□ -1.51
NCK1-204ENST00000469404 DDX21Q9NR30 783 aaKnown RBP eCLIP5.65□□□□□ -1.51
NCK1-204ENST00000469404 CCDC87Q9NVE4 849 aa5.65□□□□□ -1.51
NCK1-204ENST00000469404 KCPQ6ZWJ8 1503 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 KDM3BQ7LBC6 1761 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 IPO8O15397 1037 aaKnown RBP5.64□□□□□ -1.51
NCK1-204ENST00000469404 RFC4P35249 363 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 INTS5Q6P9B9 1019 aaKnown RBP5.64□□□□□ -1.51
NCK1-204ENST00000469404 ANKRD13DQ6ZTN6 518 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 C3orf67Q6ZVT6 689 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 C9orf78Q9NZ63 289 aaPredicted RBP5.64□□□□□ -1.51
NCK1-204ENST00000469404 RTCBQ9Y3I0 505 aaKnown RBP5.64□□□□□ -1.51
NCK1-204ENST00000469404 ZPR1O75312 459 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 GTF2E1P29083 439 aaPredicted RBP5.64□□□□□ -1.51
NCK1-204ENST00000469404 BAG6P46379 1132 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 ALDH1L2Q3SY69 923 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 USPL1Q5W0Q7 1092 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 NUTM1Q86Y26 1132 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 MEIS3Q99687 375 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 HYPKQ9NX55 129 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 MRC1P22897 1456 aa5.64□□□□□ -1.51
NCK1-204ENST00000469404 SIPA1L3O60292 1781 aaPredicted RBP5.63□□□□□ -1.51
NCK1-204ENST00000469404 DDX58O95786 925 aaKnown RBP5.63□□□□□ -1.51
NCK1-204ENST00000469404 NEXNQ0ZGT2 675 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 R3HDM1Q15032 1099 aaKnown RBP5.63□□□□□ -1.51
NCK1-204ENST00000469404 IFFO2Q5TF58 517 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 UBE3BQ7Z3V4 1068 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 MYH14Q7Z406 1995 aaKnown RBP5.63□□□□□ -1.51
NCK1-204ENST00000469404 SBF2Q86WG5 1849 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 DNAAF4Q8WXU2 420 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 FAM89AQ96GI7 184 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 CCDC136Q96JN2 1154 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 ZBTB7AO95365 584 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 NBPF7P0C2Y1 421 aaPredicted RBP5.63□□□□□ -1.51
NCK1-204ENST00000469404 TRAPPC3LQ5T215 181 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 ARHGEF1Q92888 912 aaKnown RBP5.63□□□□□ -1.51
NCK1-204ENST00000469404 BABAM1Q9NWV8 329 aa5.63□□□□□ -1.51
NCK1-204ENST00000469404 NIP7Q9Y221 180 aaKnown RBP eCLIP5.63□□□□□ -1.51
NCK1-204ENST00000469404 ADCY9O60503 1353 aa5.62□□□□□ -1.51
NCK1-204ENST00000469404 COL15A1P39059 1388 aa5.62□□□□□ -1.51
NCK1-204ENST00000469404 TEX13AQ9BXU3 409 aaPredicted RBP5.62□□□□□ -1.51
NCK1-204ENST00000469404 API5Q9BZZ5 524 aaKnown RBP5.62□□□□□ -1.51
NCK1-204ENST00000469404 SRCIN1Q9C0H9 1055 aa5.62□□□□□ -1.51
NCK1-204ENST00000469404 A0A087WZG4 1122 aa5.62□□□□□ -1.51
NCK1-204ENST00000469404 CT47B1P0C2W7 299 aaPredicted RBP5.62□□□□□ -1.51
NCK1-204ENST00000469404 HCLS1P14317 486 aaPredicted RBP5.62□□□□□ -1.51
NCK1-204ENST00000469404 MVPQ14764 893 aaKnown RBP5.62□□□□□ -1.51
NCK1-204ENST00000469404 KSR2Q6VAB6 950 aa5.62□□□□□ -1.51
NCK1-204ENST00000469404 KLHDC4Q8TBB5 520 aa5.62□□□□□ -1.51
NCK1-204ENST00000469404 L3MBTL3Q96JM7 780 aaPredicted RBP5.62□□□□□ -1.51
NCK1-204ENST00000469404 SIL1Q9H173 461 aa5.62□□□□□ -1.51
NCK1-204ENST00000469404 LRRFIP2Q9Y608 721 aaKnown RBP5.62□□□□□ -1.51
NCK1-204ENST00000469404 NHSQ6T4R5 1651 aa5.62□□□□□ -1.51
NCK1-204ENST00000469404 IGKV5-2P06315 115 aa5.61□□□□□ -1.51
NCK1-204ENST00000469404 HOXB7P09629 217 aa5.61□□□□□ -1.51
NCK1-204ENST00000469404 UBTFL1P0CB47 393 aaPredicted RBP5.61□□□□□ -1.51
NCK1-204ENST00000469404 TBC1D9BQ66K14 1250 aa5.61□□□□□ -1.51
NCK1-204ENST00000469404 VSIG10Q8N0Z9 540 aa5.61□□□□□ -1.51
NCK1-204ENST00000469404 UPF1Q92900 1129 aaKnown RBP eCLIP5.61□□□□□ -1.51
NCK1-204ENST00000469404 TRMT112Q9UI30 125 aaKnown RBP5.61□□□□□ -1.51
NCK1-204ENST00000469404 ADAMTS7Q9UKP4 1686 aa5.61□□□□□ -1.51
NCK1-204ENST00000469404 PTPRCP08575 1304 aa5.61□□□□□ -1.51
NCK1-204ENST00000469404 IL6STP40189 918 aaPredicted RBP5.6□□□□□ -1.51
NCK1-204ENST00000469404 EIF5P55010 431 aaKnown RBP5.6□□□□□ -1.51
NCK1-204ENST00000469404 COL23A1Q86Y22 540 aaPredicted RBP5.6□□□□□ -1.51
NCK1-204ENST00000469404 STK32BQ9NY57 414 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 UBR2Q8IWV8 1755 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 MAP3K15Q6ZN16 1313 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 NEURL1BA8MQ27 555 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 BEND3Q5T5X7 828 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 Q6ZNB5 142 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 LRP10Q7Z4F1 713 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 NBPF5PQ86XG9 351 aaPredicted RBP5.6□□□□□ -1.51
NCK1-204ENST00000469404 PLBD2Q8NHP8 589 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 CAMKK2Q96RR4 588 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 SOS1Q07889 1333 aaPredicted RBP5.6□□□□□ -1.51
NCK1-204ENST00000469404 UBN2Q6ZU65 1347 aa5.6□□□□□ -1.51
NCK1-204ENST00000469404 SLC27A3Q5K4L6 730 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 SLC51AQ86UW1 340 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 SETDB2Q96T68 719 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 METTL22Q9BUU2 404 aaPredicted RBP5.59□□□□□ -1.51
NCK1-204ENST00000469404 DDX19BQ9UMR2 479 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 PCDHB15Q9Y5E8 787 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 TJP1Q07157 1748 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 ABCC4O15439 1325 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 PAPPAQ13219 1627 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 PLSCR1O15162 318 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 SRGAP3O43295 1099 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 RPS6KA4O75676 772 aa5.59□□□□□ -1.51
NCK1-204ENST00000469404 CAMTA2O94983 1202 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms