RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 KIF6Q6ZMV9 814 aa19.04■□□□□ 0.64
COL16A1-208ENST00000468459 NUTM1Q86Y26 1132 aa19.04■□□□□ 0.64
COL16A1-208ENST00000468459 SMC1BQ8NDV3 1235 aa19.04■□□□□ 0.64
COL16A1-208ENST00000468459 ANXA1P04083 346 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 HTRA3P83110 453 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 EXOSC9Q06265 439 aaKnown RBP19.03■□□□□ 0.64
COL16A1-208ENST00000468459 SLFN5Q08AF3 891 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 PROSER3Q2NL68 480 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 CCDC93Q567U6 631 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 SUSD4Q5VX71 490 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 DPY19L2Q6NUT2 758 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 OLFM4Q6UX06 510 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 NYXQ9GZU5 481 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 ZBTB3Q9H5J0 574 aa19.03■□□□□ 0.64
COL16A1-208ENST00000468459 IBTKQ9P2D0 1353 aaPredicted RBP19.03■□□□□ 0.64
COL16A1-208ENST00000468459 E9PSI1 815 aa19.02■□□□□ 0.64
COL16A1-208ENST00000468459 HOXB7P09629 217 aa19.02■□□□□ 0.64
COL16A1-208ENST00000468459 HDGFL1Q5TGJ6 251 aa19.02■□□□□ 0.64
COL16A1-208ENST00000468459 GIGYF2Q6Y7W6 1299 aaKnown RBP19.02■□□□□ 0.64
COL16A1-208ENST00000468459 FER1L6Q2WGJ9 1857 aa19.02■□□□□ 0.64
COL16A1-208ENST00000468459 TNRC6CQ9HCJ0 1690 aaKnown RBP19.01■□□□□ 0.63
COL16A1-208ENST00000468459 SNED1Q8TER0 1413 aa19.01■□□□□ 0.63
COL16A1-208ENST00000468459 GPTP24298 496 aa19.01■□□□□ 0.63
COL16A1-208ENST00000468459 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
COL16A1-208ENST00000468459 ALDH1B1P30837 517 aa19.01■□□□□ 0.63
COL16A1-208ENST00000468459 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
COL16A1-208ENST00000468459 DDNO94850 711 aaPredicted RBP19■□□□□ 0.63
COL16A1-208ENST00000468459 NTSR2O95665 410 aa19■□□□□ 0.63
COL16A1-208ENST00000468459 HOXA10P31260 410 aaPredicted RBP19■□□□□ 0.63
COL16A1-208ENST00000468459 FKBP4Q02790 459 aaKnown RBP eCLIP19■□□□□ 0.63
COL16A1-208ENST00000468459 TWISTNBQ3B726 338 aaPredicted RBP19■□□□□ 0.63
COL16A1-208ENST00000468459 CHPF2Q9P2E5 772 aa19■□□□□ 0.63
COL16A1-208ENST00000468459 RIC1Q4ADV7 1423 aa19■□□□□ 0.63
COL16A1-208ENST00000468459 TCERG1O14776 1098 aaKnown RBP18.99■□□□□ 0.63
COL16A1-208ENST00000468459 RTKN2Q8IZC4 609 aa18.99■□□□□ 0.63
COL16A1-208ENST00000468459 PCNTO95613 3336 aa18.99■□□□□ 0.63
COL16A1-208ENST00000468459 WDR90Q96KV7 1748 aa18.98■□□□□ 0.63
COL16A1-208ENST00000468459 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
COL16A1-208ENST00000468459 TRMT2AQ8IZ69 625 aaKnown RBP18.98■□□□□ 0.63
COL16A1-208ENST00000468459 KLRG1Q96E93 195 aa18.98■□□□□ 0.63
COL16A1-208ENST00000468459 ZNF277Q9NRM2 450 aaPredicted RBP18.98■□□□□ 0.63
COL16A1-208ENST00000468459 TIAM2Q8IVF5 1701 aa18.97■□□□□ 0.63
COL16A1-208ENST00000468459 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
COL16A1-208ENST00000468459 PARP10Q53GL7 1025 aa18.96■□□□□ 0.63
COL16A1-208ENST00000468459 SLC10A5Q5PT55 438 aa18.96■□□□□ 0.63
COL16A1-208ENST00000468459 COPS6Q7L5N1 327 aa18.96■□□□□ 0.63
COL16A1-208ENST00000468459 JMYQ8N9B5 988 aa18.96■□□□□ 0.63
COL16A1-208ENST00000468459 L3MBTL3Q96JM7 780 aaPredicted RBP18.96■□□□□ 0.63
COL16A1-208ENST00000468459 YTHDC1Q96MU7 727 aaKnown RBP18.96■□□□□ 0.63
COL16A1-208ENST00000468459 CCDC88AQ3V6T2 1871 aa18.95■□□□□ 0.62
COL16A1-208ENST00000468459 VAMP4O75379 141 aa18.95■□□□□ 0.62
COL16A1-208ENST00000468459 SYNE4Q8N205 404 aa18.95■□□□□ 0.62
COL16A1-208ENST00000468459 CRAMP1Q96RY5 1269 aa18.95■□□□□ 0.62
COL16A1-208ENST00000468459 PSMD1Q99460 953 aa18.95■□□□□ 0.62
COL16A1-208ENST00000468459 DDX21Q9NR30 783 aaKnown RBP eCLIP18.95■□□□□ 0.62
COL16A1-208ENST00000468459 FZD9O00144 591 aa18.94■□□□□ 0.62
COL16A1-208ENST00000468459 POTEIP0CG38 1075 aa18.94■□□□□ 0.62
COL16A1-208ENST00000468459 POTEJP0CG39 1038 aa18.94■□□□□ 0.62
COL16A1-208ENST00000468459 IARSP41252 1262 aaKnown RBP18.94■□□□□ 0.62
COL16A1-208ENST00000468459 CC2D2BQ6DHV5 1058 aa18.94■□□□□ 0.62
COL16A1-208ENST00000468459 PPP1R42Q7Z4L9 355 aa18.94■□□□□ 0.62
COL16A1-208ENST00000468459 SLC51AQ86UW1 340 aa18.94■□□□□ 0.62
COL16A1-208ENST00000468459 XAGE3Q8WTP9 111 aa18.94■□□□□ 0.62
COL16A1-208ENST00000468459 ZNF541Q9H0D2 1346 aa18.94■□□□□ 0.62
COL16A1-208ENST00000468459 CCDC30Q5VVM6 783 aa18.93■□□□□ 0.62
COL16A1-208ENST00000468459 UTP14AQ9BVJ6 771 aaKnown RBP18.93■□□□□ 0.62
COL16A1-208ENST00000468459 DBF4Q9UBU7 674 aaPredicted RBP18.93■□□□□ 0.62
COL16A1-208ENST00000468459 AIMP1Q12904 312 aaKnown RBP18.92■□□□□ 0.62
COL16A1-208ENST00000468459 NLRP10Q86W26 655 aa18.92■□□□□ 0.62
COL16A1-208ENST00000468459 RPGRQ92834 1020 aaKnown RBP18.92■□□□□ 0.62
COL16A1-208ENST00000468459 NUP98P52948 1817 aa18.92■□□□□ 0.62
COL16A1-208ENST00000468459 DICER1Q9UPY3 1922 aaKnown RBP18.92■□□□□ 0.62
COL16A1-208ENST00000468459 TCIRG1Q13488 830 aa18.91■□□□□ 0.62
COL16A1-208ENST00000468459 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
COL16A1-208ENST00000468459 IFFO2Q5TF58 517 aa18.91■□□□□ 0.62
COL16A1-208ENST00000468459 CHADLQ6NUI6 762 aa18.91■□□□□ 0.62
COL16A1-208ENST00000468459 RBM17Q96I25 401 aaKnown RBP18.91■□□□□ 0.62
COL16A1-208ENST00000468459 NLRP3Q96P20 1036 aa18.91■□□□□ 0.62
COL16A1-208ENST00000468459 TAF1DQ9H5J8 278 aaPredicted RBP18.91■□□□□ 0.62
COL16A1-208ENST00000468459 PHAXQ9H814 394 aaKnown RBP18.91■□□□□ 0.62
COL16A1-208ENST00000468459 IQCA1LA6NCM1 817 aa18.9■□□□□ 0.62
COL16A1-208ENST00000468459 GRIPAP1Q4V328 841 aa18.9■□□□□ 0.62
COL16A1-208ENST00000468459 RNF123Q5XPI4 1314 aa18.9■□□□□ 0.62
COL16A1-208ENST00000468459 CACNA1SQ13698 1873 aa18.9■□□□□ 0.62
COL16A1-208ENST00000468459 PPEF1O14829 653 aaPredicted RBP18.89■□□□□ 0.61
COL16A1-208ENST00000468459 G2E3Q7L622 706 aa18.89■□□□□ 0.61
COL16A1-208ENST00000468459 STK31Q9BXU1 1019 aa18.89■□□□□ 0.61
COL16A1-208ENST00000468459 HYPKQ9NX55 129 aa18.89■□□□□ 0.61
COL16A1-208ENST00000468459 COL4A5P29400 1685 aa18.88■□□□□ 0.61
COL16A1-208ENST00000468459 ABCC4O15439 1325 aa18.87■□□□□ 0.61
COL16A1-208ENST00000468459 SLC4A2P04920 1241 aa18.87■□□□□ 0.61
COL16A1-208ENST00000468459 LDHDQ86WU2 507 aa18.87■□□□□ 0.61
COL16A1-208ENST00000468459 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
COL16A1-208ENST00000468459 ATP6V0A2Q9Y487 856 aa18.87■□□□□ 0.61
COL16A1-208ENST00000468459 PASKQ96RG2 1323 aa18.86■□□□□ 0.61
COL16A1-208ENST00000468459 HCLS1P14317 486 aaPredicted RBP18.86■□□□□ 0.61
COL16A1-208ENST00000468459 GPC2Q8N158 579 aa18.86■□□□□ 0.61
COL16A1-208ENST00000468459 PLBD2Q8NHP8 589 aa18.86■□□□□ 0.61
COL16A1-208ENST00000468459 JDP2Q8WYK2 163 aa18.86■□□□□ 0.61
COL16A1-208ENST00000468459 ISCA1Q9BUE6 129 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms