RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RAD51AP2Q09MP3 1159 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 TEAD4Q15561 434 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 RTN1Q16799 776 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 FAM26DQ5JW98 314 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 LDLRAD1Q5T700 205 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 METTL16Q86W50 562 aaKnown RBP5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 TREML1Q86YW5 311 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 ETFBKMTQ8IXQ9 262 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 GJD3Q8N144 294 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 NUDT16Q96DE0 195 aaKnown RBP5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 CSRNP1Q96S65 589 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 TGIF2Q9GZN2 237 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 ACBD3Q9H3P7 528 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 SPG7Q9UQ90 795 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 EIF1AYO14602 144 aaKnown RBP5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 ADH1AP07327 375 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 NR3C2P08235 984 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 EIF4BP23588 611 aaKnown RBP5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 WDR4P57081 412 aaKnown RBP5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 ORC1Q13415 861 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 MRPL14Q6P1L8 145 aaKnown RBP5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 DPH6Q7L8W6 267 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 DHX38Q92620 1227 aaKnown RBP5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 AIDAQ96BJ3 306 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 SPATA32Q96LK8 384 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 ZSCAN10Q96SZ4 725 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 NIFKQ9BYG3 293 aaKnown RBP5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 FAM13BQ9NYF5 915 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 IQSEC3Q9UPP2 1182 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 INPP5FQ9Y2H2 1132 aa5.54□□□□□ -1.52
HMGB1P25-201ENST00000468402 IGHA2P01877 340 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 BMP2P12643 396 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 TNNI2P48788 182 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 RELBQ01201 579 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 CBLBQ13191 982 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 CLN3Q13286 438 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 NNTQ13423 1086 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 GPAT2Q6NUI2 795 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 VPS37DQ86XT2 251 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 FBF1Q8TES7 1133 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 ZDHHC1Q8WTX9 485 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 FRMD6Q96NE9 622 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 AK5Q9Y6K8 562 aa5.53□□□□□ -1.52
HMGB1P25-201ENST00000468402 A6NHS1 94 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 SIAH2O43255 324 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 RPLP1P05386 114 aaKnown RBP5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 GNASQ5JWF2 1037 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 SLC27A3Q5K4L6 730 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 SVOPQ8N4V2 548 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 MPNDQ8N594 471 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 PMFBP1Q8TBY8 1022 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 RHPN1Q8TCX5 695 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 CRELD1Q96HD1 420 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 AGBL1Q96MI9 1066 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 ZNF395Q9H8N7 513 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 NEUROD4Q9HD90 331 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 NLRP2Q9NX02 1062 aa5.52□□□□□ -1.53
HMGB1P25-201ENST00000468402 CPNE3O75131 537 aaKnown RBP5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 MICAL2O94851 1124 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 PTGIRP43119 386 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 HIRAP54198 1017 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 ARID5AQ03989 594 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 USP48Q86UV5 1035 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 ZNF654Q8IZM8 581 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 SLC43A3Q8NBI5 491 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 TINF2Q9BSI4 451 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 GGNBP2Q9H3C7 697 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 GGT7Q9UJ14 662 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 PCDHGB7Q9Y5F8 929 aa5.51□□□□□ -1.53
HMGB1P25-201ENST00000468402 NCLP19338 710 aaKnown RBP5.5□□□□□ -1.53
HMGB1P25-201ENST00000468402 PLA2G4AP47712 749 aa5.5□□□□□ -1.53
HMGB1P25-201ENST00000468402 ZNF394Q53GI3 561 aa5.5□□□□□ -1.53
HMGB1P25-201ENST00000468402 BICDL1Q6ZP65 573 aa5.5□□□□□ -1.53
HMGB1P25-201ENST00000468402 HS2ST1Q7LGA3 356 aa5.5□□□□□ -1.53
HMGB1P25-201ENST00000468402 PPARGC1BQ86YN6 1023 aaKnown RBP5.5□□□□□ -1.53
HMGB1P25-201ENST00000468402 LNPKQ9C0E8 428 aa5.5□□□□□ -1.53
HMGB1P25-201ENST00000468402 DNAJC25Q9H1X3 360 aa5.5□□□□□ -1.53
HMGB1P25-201ENST00000468402 OPLAHO14841 1288 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 ZIC2O95409 532 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 TXLNAP40222 546 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 RASSF7Q02833 373 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 KCNMA1Q12791 1236 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 HIF1AQ16665 826 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 NBPF1Q3BBV0 1214 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 C1orf53Q5VUE5 145 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 GIMAP6Q6P9H5 292 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 CMTR1Q8N1G2 835 aaKnown RBP5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 RHBDD1Q8TEB9 315 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 FHDC1Q9C0D6 1143 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 FNDC3AQ9Y2H6 1198 aaKnown RBP5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 HRH3Q9Y5N1 445 aa5.49□□□□□ -1.53
HMGB1P25-201ENST00000468402 TTBK1Q5TCY1 1321 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 GADD45BO75293 160 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 CTSHP09668 335 aa5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 TATP17735 454 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 PHKA2P46019 1235 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms