RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 AOC2O75106 756 aa18.16■□□□□ 0.5
RPP40-204ENST00000468105 TTLL7Q6ZT98 887 aa18.16■□□□□ 0.5
RPP40-204ENST00000468105 NPM2Q86SE8 214 aaKnown RBP18.16■□□□□ 0.5
RPP40-204ENST00000468105 CAPNS2Q96L46 248 aa18.16■□□□□ 0.5
RPP40-204ENST00000468105 UBN2Q6ZU65 1347 aa18.16■□□□□ 0.5
RPP40-204ENST00000468105 NUP98P52948 1817 aa18.16■□□□□ 0.5
RPP40-204ENST00000468105 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
RPP40-204ENST00000468105 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
RPP40-204ENST00000468105 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
RPP40-204ENST00000468105 TNRC18O15417 2968 aaPredicted RBP18.14■□□□□ 0.49
RPP40-204ENST00000468105 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
RPP40-204ENST00000468105 ALDH1B1P30837 517 aa18.14■□□□□ 0.49
RPP40-204ENST00000468105 MAP2K1Q02750 393 aaPredicted RBP18.14■□□□□ 0.49
RPP40-204ENST00000468105 GRM1Q13255 1194 aa18.14■□□□□ 0.49
RPP40-204ENST00000468105 HOXA10P31260 410 aaPredicted RBP18.13■□□□□ 0.49
RPP40-204ENST00000468105 SUSD4Q5VX71 490 aa18.13■□□□□ 0.49
RPP40-204ENST00000468105 TRPM7Q96QT4 1865 aa18.13■□□□□ 0.49
RPP40-204ENST00000468105 RGL2O15211 777 aa18.12■□□□□ 0.49
RPP40-204ENST00000468105 GPTP24298 496 aa18.12■□□□□ 0.49
RPP40-204ENST00000468105 RGS19P49795 217 aa18.12■□□□□ 0.49
RPP40-204ENST00000468105 DLK2Q6UY11 383 aa18.12■□□□□ 0.49
RPP40-204ENST00000468105 GPR101Q96P66 508 aaPredicted RBP18.12■□□□□ 0.49
RPP40-204ENST00000468105 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
RPP40-204ENST00000468105 CCDC85CA6NKD9 419 aa18.11■□□□□ 0.49
RPP40-204ENST00000468105 JDP2Q8WYK2 163 aa18.11■□□□□ 0.49
RPP40-204ENST00000468105 ZIC5Q96T25 663 aa18.11■□□□□ 0.49
RPP40-204ENST00000468105 TLL2Q9Y6L7 1015 aa18.11■□□□□ 0.49
RPP40-204ENST00000468105 RIC1Q4ADV7 1423 aa18.11■□□□□ 0.49
RPP40-204ENST00000468105 SHTN1A0MZ66 631 aa18.1■□□□□ 0.49
RPP40-204ENST00000468105 EIF6P56537 245 aaKnown RBP18.1■□□□□ 0.49
RPP40-204ENST00000468105 LARGE2Q8N3Y3 721 aa18.1■□□□□ 0.49
RPP40-204ENST00000468105 CASP8AP2Q9UKL3 1982 aa18.1■□□□□ 0.49
RPP40-204ENST00000468105 KDM3BQ7LBC6 1761 aa18.09■□□□□ 0.49
RPP40-204ENST00000468105 MAP3K15Q6ZN16 1313 aa18.09■□□□□ 0.49
RPP40-204ENST00000468105 NTSR2O95665 410 aa18.09■□□□□ 0.49
RPP40-204ENST00000468105 HIRAP54198 1017 aaPredicted RBP18.09■□□□□ 0.49
RPP40-204ENST00000468105 PAXIP1Q6ZW49 1069 aaPredicted RBP18.09■□□□□ 0.49
RPP40-204ENST00000468105 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.48
RPP40-204ENST00000468105 GTF2E1P29083 439 aaPredicted RBP18.08■□□□□ 0.48
RPP40-204ENST00000468105 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.48
RPP40-204ENST00000468105 TAF7Q15545 349 aaPredicted RBP18.08■□□□□ 0.48
RPP40-204ENST00000468105 AOC3Q16853 763 aa18.08■□□□□ 0.48
RPP40-204ENST00000468105 SAPCD2Q86UD0 394 aa18.08■□□□□ 0.48
RPP40-204ENST00000468105 ZNF34Q8IZ26 560 aa18.08■□□□□ 0.48
RPP40-204ENST00000468105 THUMPD2Q9BTF0 503 aaKnown RBP18.08■□□□□ 0.48
RPP40-204ENST00000468105 GLIS2Q9BZE0 524 aaPredicted RBP18.08■□□□□ 0.48
RPP40-204ENST00000468105 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.48
RPP40-204ENST00000468105 RRP7AQ9Y3A4 280 aaKnown RBP18.08■□□□□ 0.48
RPP40-204ENST00000468105 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
RPP40-204ENST00000468105 PPP2R1AP30153 589 aa18.07■□□□□ 0.48
RPP40-204ENST00000468105 CXCL9Q07325 125 aa18.07■□□□□ 0.48
RPP40-204ENST00000468105 USP50Q70EL3 339 aaPredicted RBP18.07■□□□□ 0.48
RPP40-204ENST00000468105 LRP10Q7Z4F1 713 aa18.07■□□□□ 0.48
RPP40-204ENST00000468105 GPRC5DQ9NZD1 345 aa18.07■□□□□ 0.48
RPP40-204ENST00000468105 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
RPP40-204ENST00000468105 PPEF1O14829 653 aaPredicted RBP18.06■□□□□ 0.48
RPP40-204ENST00000468105 MYL6BP14649 208 aa18.06■□□□□ 0.48
RPP40-204ENST00000468105 LMOD1P29536 600 aaPredicted RBP18.06■□□□□ 0.48
RPP40-204ENST00000468105 EIF4A1P60842 406 aaKnown RBP18.06■□□□□ 0.48
RPP40-204ENST00000468105 MLLT1Q03111 559 aaPredicted RBP18.06■□□□□ 0.48
RPP40-204ENST00000468105 RTF1Q92541 710 aaKnown RBP18.06■□□□□ 0.48
RPP40-204ENST00000468105 CRAMP1Q96RY5 1269 aa18.06■□□□□ 0.48
RPP40-204ENST00000468105 MCOLN1Q9GZU1 580 aa18.06■□□□□ 0.48
RPP40-204ENST00000468105 CC2D2BQ6DHV5 1058 aa18.05■□□□□ 0.48
RPP40-204ENST00000468105 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
RPP40-204ENST00000468105 TAF1P21675 1872 aa18.05■□□□□ 0.48
RPP40-204ENST00000468105 PPIP5K2O43314 1243 aa18.04■□□□□ 0.48
RPP40-204ENST00000468105 CELF2O95319 508 aaKnown RBP18.04■□□□□ 0.48
RPP40-204ENST00000468105 GMPSP49915 693 aaPredicted RBP18.04■□□□□ 0.48
RPP40-204ENST00000468105 TRPM4Q8TD43 1214 aa18.04■□□□□ 0.48
RPP40-204ENST00000468105 NYXQ9GZU5 481 aa18.04■□□□□ 0.48
RPP40-204ENST00000468105 PGAP2Q9UHJ9 254 aa18.04■□□□□ 0.48
RPP40-204ENST00000468105 COL4A1P02462 1669 aa18.03■□□□□ 0.48
RPP40-204ENST00000468105 HTATSF1O43719 755 aaKnown RBP18.03■□□□□ 0.48
RPP40-204ENST00000468105 ECE1P42892 770 aa18.03■□□□□ 0.48
RPP40-204ENST00000468105 PDIA6Q15084 440 aa18.03■□□□□ 0.48
RPP40-204ENST00000468105 NIM1KQ8IY84 436 aa18.03■□□□□ 0.48
RPP40-204ENST00000468105 ADARB2Q9NS39 739 aaKnown RBP18.03■□□□□ 0.48
RPP40-204ENST00000468105 LAMB2P55268 1798 aa18.03■□□□□ 0.48
RPP40-204ENST00000468105 IBTKQ9P2D0 1353 aaPredicted RBP18.03■□□□□ 0.48
RPP40-204ENST00000468105 ABCC4O15439 1325 aa18.02■□□□□ 0.48
RPP40-204ENST00000468105 YDJCA8MPS7 323 aa18.02■□□□□ 0.48
RPP40-204ENST00000468105 MAP2K2P36507 400 aa18.02■□□□□ 0.48
RPP40-204ENST00000468105 PROSER3Q2NL68 480 aa18.02■□□□□ 0.48
RPP40-204ENST00000468105 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
RPP40-204ENST00000468105 DUOX1Q9NRD9 1551 aa18.02■□□□□ 0.48
RPP40-204ENST00000468105 ATP6V0A2Q9Y487 856 aa18.02■□□□□ 0.48
RPP40-204ENST00000468105 ANXA1P04083 346 aa18.01■□□□□ 0.47
RPP40-204ENST00000468105 CIAPIN1Q6FI81 312 aa18.01■□□□□ 0.47
RPP40-204ENST00000468105 GIGYF2Q6Y7W6 1299 aaKnown RBP18.01■□□□□ 0.47
RPP40-204ENST00000468105 ZNF428Q96B54 188 aa18.01■□□□□ 0.47
RPP40-204ENST00000468105 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
RPP40-204ENST00000468105 RAD17O75943 681 aa18■□□□□ 0.47
RPP40-204ENST00000468105 EGFRP00533 1210 aa18■□□□□ 0.47
RPP40-204ENST00000468105 CFAP53Q96M91 514 aa18■□□□□ 0.47
RPP40-204ENST00000468105 PLEKHF1Q96S99 279 aa18■□□□□ 0.47
RPP40-204ENST00000468105 ZNRF3Q9ULT6 936 aa18■□□□□ 0.47
RPP40-204ENST00000468105 SLC10A5Q5PT55 438 aa17.99■□□□□ 0.47
RPP40-204ENST00000468105 BEGAINQ9BUH8 593 aa17.99■□□□□ 0.47
RPP40-204ENST00000468105 ZNF408Q9H9D4 720 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms