RNA–Protein interactions for RNA: ENST00000467824.1

SYN3-209, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-209ENST00000467824 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
SYN3-209ENST00000467824 PCNTO95613 3336 aa12.65□□□□□ -0.38
SYN3-209ENST00000467824 SLX4Q8IY92 1834 aa12.65□□□□□ -0.39
SYN3-209ENST00000467824 ARFGEF2Q9Y6D5 1785 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 FER1L6Q2WGJ9 1857 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 IQCA1LA6NCM1 817 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 ANXA1P04083 346 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 HDGFL1Q5TGJ6 251 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 COPS6Q7L5N1 327 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 NECTIN2Q92692 538 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
SYN3-209ENST00000467824 TMX4Q9H1E5 349 aaPredicted RBP12.64□□□□□ -0.39
SYN3-209ENST00000467824 AIMP1Q12904 312 aaKnown RBP12.63□□□□□ -0.39
SYN3-209ENST00000467824 NLRP3Q96P20 1036 aa12.63□□□□□ -0.39
SYN3-209ENST00000467824 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
SYN3-209ENST00000467824 PSMD1Q99460 953 aa12.63□□□□□ -0.39
SYN3-209ENST00000467824 ZNF277Q9NRM2 450 aaPredicted RBP12.63□□□□□ -0.39
SYN3-209ENST00000467824 DBF4Q9UBU7 674 aaPredicted RBP12.63□□□□□ -0.39
SYN3-209ENST00000467824 POTECB2RU33 542 aa12.62□□□□□ -0.39
SYN3-209ENST00000467824 PPEF1O14829 653 aaPredicted RBP12.62□□□□□ -0.39
SYN3-209ENST00000467824 DDNO94850 711 aaPredicted RBP12.62□□□□□ -0.39
SYN3-209ENST00000467824 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
SYN3-209ENST00000467824 KRT24Q2M2I5 525 aa12.62□□□□□ -0.39
SYN3-209ENST00000467824 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
SYN3-209ENST00000467824 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
SYN3-209ENST00000467824 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
SYN3-209ENST00000467824 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
SYN3-209ENST00000467824 APAF1O14727 1248 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 GNAI1P63096 354 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 NLRP10Q86W26 655 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 SYNE4Q8N205 404 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
SYN3-209ENST00000467824 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 IFT57Q9NWB7 429 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 HYPKQ9NX55 129 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 SH3TC1Q8TE82 1336 aa12.61□□□□□ -0.39
SYN3-209ENST00000467824 NUP98P52948 1817 aa12.6□□□□□ -0.39
SYN3-209ENST00000467824 DUSP27Q5VZP5 1158 aa12.6□□□□□ -0.39
SYN3-209ENST00000467824 PLBD2Q8NHP8 589 aa12.6□□□□□ -0.39
SYN3-209ENST00000467824 KLRG1Q96E93 195 aa12.6□□□□□ -0.39
SYN3-209ENST00000467824 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
SYN3-209ENST00000467824 TRMT112Q9UI30 125 aaKnown RBP12.6□□□□□ -0.39
SYN3-209ENST00000467824 CAPN15O75808 1086 aa12.59□□□□□ -0.39
SYN3-209ENST00000467824 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
SYN3-209ENST00000467824 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
SYN3-209ENST00000467824 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
SYN3-209ENST00000467824 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
SYN3-209ENST00000467824 SNED1Q8TER0 1413 aa12.59□□□□□ -0.39
SYN3-209ENST00000467824 ZNF541Q9H0D2 1346 aa12.59□□□□□ -0.39
SYN3-209ENST00000467824 DICER1Q9UPY3 1922 aaKnown RBP12.58□□□□□ -0.39
SYN3-209ENST00000467824 FZD9O00144 591 aa12.58□□□□□ -0.4
SYN3-209ENST00000467824 BBOX1O75936 387 aa12.58□□□□□ -0.4
SYN3-209ENST00000467824 EIF6P56537 245 aaKnown RBP12.58□□□□□ -0.4
SYN3-209ENST00000467824 DDX46Q7L014 1031 aaKnown RBP12.58□□□□□ -0.4
SYN3-209ENST00000467824 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
SYN3-209ENST00000467824 GPC2Q8N158 579 aa12.58□□□□□ -0.4
SYN3-209ENST00000467824 LARGE2Q8N3Y3 721 aa12.58□□□□□ -0.4
SYN3-209ENST00000467824 HACL1Q9UJ83 578 aa12.58□□□□□ -0.4
SYN3-209ENST00000467824 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
SYN3-209ENST00000467824 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
SYN3-209ENST00000467824 HCLS1P14317 486 aaPredicted RBP12.57□□□□□ -0.4
SYN3-209ENST00000467824 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
SYN3-209ENST00000467824 COL13A1Q5TAT6 717 aaPredicted RBP12.57□□□□□ -0.4
SYN3-209ENST00000467824 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
SYN3-209ENST00000467824 SUPT20HQ8NEM7 779 aa12.57□□□□□ -0.4
SYN3-209ENST00000467824 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
SYN3-209ENST00000467824 TAF1DQ9H5J8 278 aaPredicted RBP12.57□□□□□ -0.4
SYN3-209ENST00000467824 ABCC4O15439 1325 aa12.57□□□□□ -0.4
SYN3-209ENST00000467824 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
SYN3-209ENST00000467824 NIM1KQ8IY84 436 aa12.56□□□□□ -0.4
SYN3-209ENST00000467824 JMYQ8N9B5 988 aa12.56□□□□□ -0.4
SYN3-209ENST00000467824 PPIP5K2O43314 1243 aa12.55□□□□□ -0.4
SYN3-209ENST00000467824 HSP90B1P14625 803 aaKnown RBP12.55□□□□□ -0.4
SYN3-209ENST00000467824 LMOD1P29536 600 aaPredicted RBP12.55□□□□□ -0.4
SYN3-209ENST00000467824 EPHX2P34913 555 aa12.55□□□□□ -0.4
SYN3-209ENST00000467824 TRIM28Q13263 835 aaKnown RBP12.55□□□□□ -0.4
SYN3-209ENST00000467824 GRAPQ13588 217 aa12.55□□□□□ -0.4
SYN3-209ENST00000467824 EAPPQ56P03 285 aaPredicted RBP12.55□□□□□ -0.4
SYN3-209ENST00000467824 DPP8Q6V1X1 898 aaPredicted RBP12.55□□□□□ -0.4
SYN3-209ENST00000467824 RIC3Q7Z5B4 369 aa12.55□□□□□ -0.4
SYN3-209ENST00000467824 SP8Q8IXZ3 490 aa12.55□□□□□ -0.4
SYN3-209ENST00000467824 GRAPLQ8TC17 118 aaPredicted RBP12.55□□□□□ -0.4
SYN3-209ENST00000467824 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
SYN3-209ENST00000467824 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
SYN3-209ENST00000467824 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
SYN3-209ENST00000467824 CCDC30Q5VVM6 783 aa12.54□□□□□ -0.4
SYN3-209ENST00000467824 RTFDC1Q9BY42 306 aaPredicted RBP12.54□□□□□ -0.4
SYN3-209ENST00000467824 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
SYN3-209ENST00000467824 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
SYN3-209ENST00000467824 ATP5J2-PTCD1G3V325 749 aa12.53□□□□□ -0.4
SYN3-209ENST00000467824 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
SYN3-209ENST00000467824 ANP32CO43423 234 aa12.53□□□□□ -0.4
SYN3-209ENST00000467824 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
SYN3-209ENST00000467824 AOC3Q16853 763 aa12.53□□□□□ -0.4
SYN3-209ENST00000467824 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
SYN3-209ENST00000467824 MPNDQ8N594 471 aa12.53□□□□□ -0.4
SYN3-209ENST00000467824 FAM89AQ96GI7 184 aa12.53□□□□□ -0.4
SYN3-209ENST00000467824 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms