RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 MBIPQ9NS73 344 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 IFT57Q9NWB7 429 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 RIC1Q4ADV7 1423 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 ABCC12Q96J65 1359 aa15.49■□□□□ 0.07
CTNS-205ENST00000467663 SLX4Q8IY92 1834 aa15.48■□□□□ 0.07
CTNS-205ENST00000467663 TOMM70O94826 608 aa15.48■□□□□ 0.07
CTNS-205ENST00000467663 NTSR2O95665 410 aa15.48■□□□□ 0.07
CTNS-205ENST00000467663 XAGE3Q8WTP9 111 aa15.48■□□□□ 0.07
CTNS-205ENST00000467663 ALDH1B1P30837 517 aa15.47■□□□□ 0.07
CTNS-205ENST00000467663 HDGFL1Q5TGJ6 251 aa15.47■□□□□ 0.07
CTNS-205ENST00000467663 PPP1R42Q7Z4L9 355 aa15.47■□□□□ 0.07
CTNS-205ENST00000467663 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
CTNS-205ENST00000467663 TAOK3Q9H2K8 898 aa15.47■□□□□ 0.07
CTNS-205ENST00000467663 CHPF2Q9P2E5 772 aa15.47■□□□□ 0.07
CTNS-205ENST00000467663 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
CTNS-205ENST00000467663 FER1L6Q2WGJ9 1857 aa15.46■□□□□ 0.07
CTNS-205ENST00000467663 GLTPD2A6NH11 291 aa15.46■□□□□ 0.07
CTNS-205ENST00000467663 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
CTNS-205ENST00000467663 CCDC93Q567U6 631 aa15.46■□□□□ 0.07
CTNS-205ENST00000467663 HSP90AB3PQ58FF7 597 aa15.46■□□□□ 0.07
CTNS-205ENST00000467663 DBF4Q9UBU7 674 aaPredicted RBP15.46■□□□□ 0.07
CTNS-205ENST00000467663 HSPA6P17066 643 aa15.45■□□□□ 0.06
CTNS-205ENST00000467663 HOXA10P31260 410 aaPredicted RBP15.45■□□□□ 0.06
CTNS-205ENST00000467663 SLC10A5Q5PT55 438 aa15.45■□□□□ 0.06
CTNS-205ENST00000467663 UTP14AQ9BVJ6 771 aaKnown RBP15.45■□□□□ 0.06
CTNS-205ENST00000467663 RRAGCQ9HB90 399 aa15.45■□□□□ 0.06
CTNS-205ENST00000467663 RCAN3Q9UKA8 241 aa15.45■□□□□ 0.06
CTNS-205ENST00000467663 TNRC6CQ9HCJ0 1690 aaKnown RBP15.44■□□□□ 0.06
CTNS-205ENST00000467663 RNF123Q5XPI4 1314 aa15.44■□□□□ 0.06
CTNS-205ENST00000467663 TCIRG1Q13488 830 aa15.44■□□□□ 0.06
CTNS-205ENST00000467663 RBM46Q8TBY0 533 aaKnown RBP15.44■□□□□ 0.06
CTNS-205ENST00000467663 HYPKQ9NX55 129 aa15.44■□□□□ 0.06
CTNS-205ENST00000467663 NEFLP07196 543 aa15.43■□□□□ 0.06
CTNS-205ENST00000467663 FKBP4Q02790 459 aaKnown RBP eCLIP15.43■□□□□ 0.06
CTNS-205ENST00000467663 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
CTNS-205ENST00000467663 NLRP10Q86W26 655 aa15.43■□□□□ 0.06
CTNS-205ENST00000467663 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
CTNS-205ENST00000467663 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
CTNS-205ENST00000467663 RPGRQ92834 1020 aaKnown RBP15.43■□□□□ 0.06
CTNS-205ENST00000467663 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
CTNS-205ENST00000467663 ANKRD13DQ6ZTN6 518 aa15.42■□□□□ 0.06
CTNS-205ENST00000467663 C3orf67Q6ZVT6 689 aa15.42■□□□□ 0.06
CTNS-205ENST00000467663 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
CTNS-205ENST00000467663 CRAMP1Q96RY5 1269 aa15.42■□□□□ 0.06
CTNS-205ENST00000467663 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
CTNS-205ENST00000467663 SPINK5Q9NQ38 1064 aaPredicted RBP15.42■□□□□ 0.06
CTNS-205ENST00000467663 FANCIQ9NVI1 1328 aa15.42■□□□□ 0.06
CTNS-205ENST00000467663 TIAM2Q8IVF5 1701 aa15.41■□□□□ 0.06
CTNS-205ENST00000467663 VEGFAP15692 232 aaPredicted RBP15.41■□□□□ 0.06
CTNS-205ENST00000467663 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
CTNS-205ENST00000467663 CC2D2BQ6DHV5 1058 aa15.41■□□□□ 0.06
CTNS-205ENST00000467663 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.41■□□□□ 0.06
CTNS-205ENST00000467663 C8orf58Q8NAV2 365 aa15.41■□□□□ 0.06
CTNS-205ENST00000467663 RBM17Q96I25 401 aaKnown RBP15.41■□□□□ 0.06
CTNS-205ENST00000467663 NLRP3Q96P20 1036 aa15.41■□□□□ 0.06
CTNS-205ENST00000467663 CACNA1SQ13698 1873 aa15.41■□□□□ 0.06
CTNS-205ENST00000467663 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
CTNS-205ENST00000467663 CACNA1FO60840 1977 aa15.4■□□□□ 0.06
CTNS-205ENST00000467663 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
CTNS-205ENST00000467663 FSTL1Q12841 308 aa15.4■□□□□ 0.06
CTNS-205ENST00000467663 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
CTNS-205ENST00000467663 SUPT16HQ9Y5B9 1047 aaKnown RBP15.4■□□□□ 0.06
CTNS-205ENST00000467663 DICER1Q9UPY3 1922 aaKnown RBP15.39■□□□□ 0.05
CTNS-205ENST00000467663 POTECB2RU33 542 aa15.39■□□□□ 0.05
CTNS-205ENST00000467663 ELL2O00472 640 aaPredicted RBP15.39■□□□□ 0.05
CTNS-205ENST00000467663 GRIPAP1Q4V328 841 aa15.39■□□□□ 0.05
CTNS-205ENST00000467663 PSMD1Q99460 953 aa15.39■□□□□ 0.05
CTNS-205ENST00000467663 TRMT112Q9UI30 125 aaKnown RBP15.39■□□□□ 0.05
CTNS-205ENST00000467663 SH3TC1Q8TE82 1336 aa15.39■□□□□ 0.05
CTNS-205ENST00000467663 ANKRD36CQ5JPF3 1778 aa15.39■□□□□ 0.05
CTNS-205ENST00000467663 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
CTNS-205ENST00000467663 SYNE4Q8N205 404 aa15.38■□□□□ 0.05
CTNS-205ENST00000467663 ZNF277Q9NRM2 450 aaPredicted RBP15.38■□□□□ 0.05
CTNS-205ENST00000467663 PPEF1O14829 653 aaPredicted RBP15.37■□□□□ 0.05
CTNS-205ENST00000467663 HCLS1P14317 486 aaPredicted RBP15.37■□□□□ 0.05
CTNS-205ENST00000467663 APLP1P51693 650 aa15.37■□□□□ 0.05
CTNS-205ENST00000467663 PHAXQ9H814 394 aaKnown RBP15.37■□□□□ 0.05
CTNS-205ENST00000467663 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
CTNS-205ENST00000467663 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
CTNS-205ENST00000467663 DDNO94850 711 aaPredicted RBP15.36■□□□□ 0.05
CTNS-205ENST00000467663 IARSP41252 1262 aaKnown RBP15.36■□□□□ 0.05
CTNS-205ENST00000467663 ALDH1L2Q3SY69 923 aa15.36■□□□□ 0.05
CTNS-205ENST00000467663 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
CTNS-205ENST00000467663 TSPYL6Q8N831 410 aa15.36■□□□□ 0.05
CTNS-205ENST00000467663 SMC1BQ8NDV3 1235 aa15.36■□□□□ 0.05
CTNS-205ENST00000467663 TSR2Q969E8 191 aaKnown RBP15.36■□□□□ 0.05
CTNS-205ENST00000467663 BBOX1O75936 387 aa15.35■□□□□ 0.05
CTNS-205ENST00000467663 EXOSC9Q06265 439 aaKnown RBP15.35■□□□□ 0.05
CTNS-205ENST00000467663 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
CTNS-205ENST00000467663 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
CTNS-205ENST00000467663 ABCC4O15439 1325 aa15.35■□□□□ 0.05
CTNS-205ENST00000467663 FZD9O00144 591 aa15.34■□□□□ 0.05
CTNS-205ENST00000467663 BRPF1P55201 1214 aaPredicted RBP15.34■□□□□ 0.05
CTNS-205ENST00000467663 SLC51AQ86UW1 340 aa15.34■□□□□ 0.05
CTNS-205ENST00000467663 L3MBTL3Q96JM7 780 aaPredicted RBP15.34■□□□□ 0.05
CTNS-205ENST00000467663 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
CTNS-205ENST00000467663 MS4A1P11836 297 aa15.33■□□□□ 0.04
CTNS-205ENST00000467663 RRP1P56182 461 aaKnown RBP15.33■□□□□ 0.04
CTNS-205ENST00000467663 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
CTNS-205ENST00000467663 SP8Q8IXZ3 490 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms