RNA–Protein interactions for RNA: ENST00000467463.1

PLXNA3-202, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 384 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-202ENST00000467463 NPR1P16066 1061 aa12.86□□□□□ -0.35
PLXNA3-202ENST00000467463 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
PLXNA3-202ENST00000467463 TSPYL6Q8N831 410 aa12.86□□□□□ -0.35
PLXNA3-202ENST00000467463 SMC1BQ8NDV3 1235 aa12.86□□□□□ -0.35
PLXNA3-202ENST00000467463 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
PLXNA3-202ENST00000467463 DLEC1Q9Y238 1755 aa12.86□□□□□ -0.35
PLXNA3-202ENST00000467463 NFKBIEO00221 500 aa12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 NTSR2O95665 410 aa12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 TCIRG1Q13488 830 aa12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 PARP10Q53GL7 1025 aa12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 PPP1R42Q7Z4L9 355 aa12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
PLXNA3-202ENST00000467463 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
PLXNA3-202ENST00000467463 C7orf43Q8WVR3 580 aa12.84□□□□□ -0.35
PLXNA3-202ENST00000467463 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
PLXNA3-202ENST00000467463 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
PLXNA3-202ENST00000467463 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 HSP90AB3PQ58FF7 597 aa12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 NLRP10Q86W26 655 aa12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 PLBD2Q8NHP8 589 aa12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 ZNF428Q96B54 188 aa12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 IL16Q14005 1332 aa12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 SLX4Q8IY92 1834 aa12.83□□□□□ -0.36
PLXNA3-202ENST00000467463 LMNB1P20700 586 aa12.82□□□□□ -0.36
PLXNA3-202ENST00000467463 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
PLXNA3-202ENST00000467463 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
PLXNA3-202ENST00000467463 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
PLXNA3-202ENST00000467463 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
PLXNA3-202ENST00000467463 TCERG1O14776 1098 aaKnown RBP12.81□□□□□ -0.36
PLXNA3-202ENST00000467463 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
PLXNA3-202ENST00000467463 CCDC30Q5VVM6 783 aa12.81□□□□□ -0.36
PLXNA3-202ENST00000467463 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
PLXNA3-202ENST00000467463 ISCA1Q9BUE6 129 aa12.81□□□□□ -0.36
PLXNA3-202ENST00000467463 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 RIC1Q4ADV7 1423 aa12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 TWISTNBQ3B726 338 aaPredicted RBP12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 TRMT112Q9UI30 125 aaKnown RBP12.8□□□□□ -0.36
PLXNA3-202ENST00000467463 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
PLXNA3-202ENST00000467463 SLC51AQ86UW1 340 aa12.79□□□□□ -0.36
PLXNA3-202ENST00000467463 RPGRQ92834 1020 aaKnown RBP12.79□□□□□ -0.36
PLXNA3-202ENST00000467463 TAOK3Q9H2K8 898 aa12.79□□□□□ -0.36
PLXNA3-202ENST00000467463 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
PLXNA3-202ENST00000467463 LTBP3Q9NS15 1303 aa12.79□□□□□ -0.36
PLXNA3-202ENST00000467463 FANCIQ9NVI1 1328 aa12.79□□□□□ -0.36
PLXNA3-202ENST00000467463 FOXN1O15353 648 aa12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 CCDC93Q567U6 631 aa12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 FAM89AQ96GI7 184 aa12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 CHMP4AQ9BY43 222 aa12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 MKRN1Q9UHC7 482 aaKnown RBP12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 RNF123Q5XPI4 1314 aa12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 SH3TC1Q8TE82 1336 aa12.78□□□□□ -0.36
PLXNA3-202ENST00000467463 CACNA1SQ13698 1873 aa12.77□□□□□ -0.37
PLXNA3-202ENST00000467463 FER1L6Q2WGJ9 1857 aa12.77□□□□□ -0.37
PLXNA3-202ENST00000467463 VAMP4O75379 141 aa12.77□□□□□ -0.37
PLXNA3-202ENST00000467463 EXOSC9Q06265 439 aaKnown RBP12.77□□□□□ -0.37
PLXNA3-202ENST00000467463 RTL5Q5HYW3 569 aaPredicted RBP12.77□□□□□ -0.37
PLXNA3-202ENST00000467463 G2E3Q7L622 706 aa12.77□□□□□ -0.37
PLXNA3-202ENST00000467463 MYD88Q99836 296 aa12.77□□□□□ -0.37
PLXNA3-202ENST00000467463 GLTPD2A6NH11 291 aa12.76□□□□□ -0.37
PLXNA3-202ENST00000467463 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
PLXNA3-202ENST00000467463 VEGFAP15692 232 aaPredicted RBP12.76□□□□□ -0.37
PLXNA3-202ENST00000467463 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
PLXNA3-202ENST00000467463 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
PLXNA3-202ENST00000467463 ZNF277Q9NRM2 450 aaPredicted RBP12.76□□□□□ -0.37
PLXNA3-202ENST00000467463 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
PLXNA3-202ENST00000467463 ARFGEF2Q9Y6D5 1785 aa12.76□□□□□ -0.37
PLXNA3-202ENST00000467463 PI4KAP2A4QPH2 592 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 ABCC4O15439 1325 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 ANKRD36CQ5JPF3 1778 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 TIAM2Q8IVF5 1701 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 PI4KAP1Q8N8J0 262 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 ZNF521Q96K83 1311 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 METTL22Q9BUU2 404 aaPredicted RBP12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
PLXNA3-202ENST00000467463 SNED1Q8TER0 1413 aa12.74□□□□□ -0.37
PLXNA3-202ENST00000467463 PPEF1O14829 653 aaPredicted RBP12.74□□□□□ -0.37
PLXNA3-202ENST00000467463 JARID2Q92833 1246 aaPredicted RBP12.74□□□□□ -0.37
PLXNA3-202ENST00000467463 POTECB2RU33 542 aa12.73□□□□□ -0.37
PLXNA3-202ENST00000467463 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
PLXNA3-202ENST00000467463 IRS4O14654 1257 aaPredicted RBP12.73□□□□□ -0.37
PLXNA3-202ENST00000467463 IGKV5-2P06315 115 aa12.73□□□□□ -0.37
PLXNA3-202ENST00000467463 CC2D2BQ6DHV5 1058 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms