RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 TRIM55Q9BYV6 548 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 SLKQ9H2G2 1235 aaPredicted RBP6.33□□□□□ -1.4
MSH2-205ENST00000467323 GGNBP2Q9H3C7 697 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 RAB6BQ9NRW1 208 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 CABP1Q9NZU7 370 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 STRIP2Q9ULQ0 834 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 HCN4Q9Y3Q4 1203 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 PRKAB1Q9Y478 270 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 PPME1Q9Y570 386 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 COL4A3BPQ9Y5P4 624 aa6.33□□□□□ -1.4
MSH2-205ENST00000467323 FAM205CA6NFA0 338 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 LILRA1O75019 489 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 DNAJC6O75061 913 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 S1PR4O95977 384 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 USP17L7P0C7H9 530 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 C1orf53Q5VUE5 145 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 KIAA0825Q8IV33 1275 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 CCDC116Q8IYX3 515 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 CNKSR1Q969H4 720 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 ESYT1Q9BSJ8 1104 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 SPON2Q9BUD6 331 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 NOC4LQ9BVI4 516 aaKnown RBP6.32□□□□□ -1.4
MSH2-205ENST00000467323 PHACTR1Q9C0D0 580 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 SPC25Q9HBM1 224 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 IFT57Q9NWB7 429 aa6.32□□□□□ -1.4
MSH2-205ENST00000467323 IL2RAP01589 272 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 TRIM32Q13049 653 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 PPP1R26Q5T8A7 1209 aaPredicted RBP6.31□□□□□ -1.4
MSH2-205ENST00000467323 DHX37Q8IY37 1157 aaKnown RBP6.31□□□□□ -1.4
MSH2-205ENST00000467323 EHBP1Q8NDI1 1231 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 EPS8L3Q8TE67 593 aaKnown RBP6.31□□□□□ -1.4
MSH2-205ENST00000467323 SNX29Q8TEQ0 813 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 ZNF408Q9H9D4 720 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 PCDH12Q9NPG4 1184 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 PGPEP1Q9NXJ5 209 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 KLHL42Q9P2K6 505 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 FNDC3AQ9Y2H6 1198 aaKnown RBP6.31□□□□□ -1.4
MSH2-205ENST00000467323 USP3Q9Y6I4 520 aa6.31□□□□□ -1.4
MSH2-205ENST00000467323 TNFRSF21O75509 655 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 COL9A2Q14055 689 aaPredicted RBP6.3□□□□□ -1.4
MSH2-205ENST00000467323 PLEKHG4Q58EX7 1191 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 SH3PXD2AQ5TCZ1 1133 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 XKR5Q6UX68 686 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 PI16Q6UXB8 463 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 ANKS3Q6ZW76 656 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 LRP10Q7Z4F1 713 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 MPNDQ8N594 471 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 ZDHHC1Q8WTX9 485 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 COPRSQ9NQ92 184 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 KBTBD4Q9NVX7 518 aa6.3□□□□□ -1.4
MSH2-205ENST00000467323 R3HCC1Q9Y3T6 440 aaKnown RBP6.3□□□□□ -1.4
MSH2-205ENST00000467323 PLEKHD1A6NEE1 506 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 A6NHS1 94 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 GTF2E1P29083 439 aaPredicted RBP6.29□□□□□ -1.4
MSH2-205ENST00000467323 GRM5P41594 1212 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 NASPP49321 788 aaPredicted RBP6.29□□□□□ -1.4
MSH2-205ENST00000467323 NR5A1Q13285 461 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 HSP90AB2PQ58FF8 381 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 TAF7LQ5H9L4 462 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
MSH2-205ENST00000467323 THSD4Q6ZMP0 1018 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 ZNF516Q92618 1163 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 RNPC3Q96LT9 517 aaKnown RBP6.29□□□□□ -1.4
MSH2-205ENST00000467323 PPP4R2Q9NY27 417 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 HRH3Q9Y5N1 445 aa6.29□□□□□ -1.4
MSH2-205ENST00000467323 POTECB2RU33 542 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 MICAL2O94851 1124 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 GSTT1P30711 240 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 IRS1P35568 1242 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
MSH2-205ENST00000467323 CHMP4BP1P59074 171 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 CLN3Q13286 438 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 RAB33AQ14088 237 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 TJAP1Q5JTD0 557 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 USPL1Q5W0Q7 1092 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 ZNF438Q7Z4V0 828 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 PSMD1Q99460 953 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 NIFKQ9BYG3 293 aaKnown RBP6.28□□□□□ -1.4
MSH2-205ENST00000467323 BCO2Q9BYV7 579 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 ZFYVE28Q9HCC9 887 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 FOXD3Q9UJU5 478 aaPredicted RBP6.28□□□□□ -1.4
MSH2-205ENST00000467323 TTF2Q9UNY4 1162 aaKnown RBP6.28□□□□□ -1.4
MSH2-205ENST00000467323 EFR3BQ9Y2G0 817 aa6.28□□□□□ -1.4
MSH2-205ENST00000467323 TGFBR3LH3BV60 316 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 PHACTR2O75167 634 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 GADD45BO75293 160 aaPredicted RBP6.27□□□□□ -1.41
MSH2-205ENST00000467323 CDC45O75419 566 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 ADH1CP00326 375 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 RLBP1P12271 317 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 SKOR1P84550 965 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 CENPCQ03188 943 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 NBPF10Q6P3W6 841 aaKnown RBP6.27□□□□□ -1.41
MSH2-205ENST00000467323 NXPE4Q6UWF7 544 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 ANKRD13DQ6ZTN6 518 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 PPARGC1BQ86YN6 1023 aaKnown RBP6.27□□□□□ -1.41
MSH2-205ENST00000467323 CPLX3Q8WVH0 158 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 MARVELD3Q96A59 401 aa6.27□□□□□ -1.41
MSH2-205ENST00000467323 DEPDC7Q96QD5 511 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms