RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 ABCC12Q96J65 1359 aa20.8■□□□□ 0.92
TSSC4-208ENST00000467308 IBTKQ9P2D0 1353 aaPredicted RBP20.8■□□□□ 0.92
TSSC4-208ENST00000467308 MAP3K15Q6ZN16 1313 aa20.79■□□□□ 0.92
TSSC4-208ENST00000467308 RASSF10A6NK89 507 aa20.79■□□□□ 0.92
TSSC4-208ENST00000467308 HOXA10P31260 410 aaPredicted RBP20.79■□□□□ 0.92
TSSC4-208ENST00000467308 NUTM1Q86Y26 1132 aa20.78■□□□□ 0.92
TSSC4-208ENST00000467308 WBP1LQ9NX94 342 aa20.78■□□□□ 0.92
TSSC4-208ENST00000467308 NEFMP07197 916 aa20.77■□□□□ 0.92
TSSC4-208ENST00000467308 MAP1SQ66K74 1059 aaPredicted RBP20.77■□□□□ 0.92
TSSC4-208ENST00000467308 KIF6Q6ZMV9 814 aa20.77■□□□□ 0.92
TSSC4-208ENST00000467308 RPGRQ92834 1020 aaKnown RBP20.77■□□□□ 0.92
TSSC4-208ENST00000467308 EIF6P56537 245 aaKnown RBP20.76■□□□□ 0.91
TSSC4-208ENST00000467308 DEFB115Q30KQ5 88 aa20.76■□□□□ 0.91
TSSC4-208ENST00000467308 NGEFQ8N5V2 710 aa20.76■□□□□ 0.91
TSSC4-208ENST00000467308 COL4A5P29400 1685 aa20.75■□□□□ 0.91
TSSC4-208ENST00000467308 EIF4A1P60842 406 aaKnown RBP20.75■□□□□ 0.91
TSSC4-208ENST00000467308 UBN2Q6ZU65 1347 aa20.75■□□□□ 0.91
TSSC4-208ENST00000467308 LMOD1P29536 600 aaPredicted RBP20.74■□□□□ 0.91
TSSC4-208ENST00000467308 TTLL7Q6ZT98 887 aa20.74■□□□□ 0.91
TSSC4-208ENST00000467308 CRAMP1Q96RY5 1269 aa20.74■□□□□ 0.91
TSSC4-208ENST00000467308 RRP7AQ9Y3A4 280 aaKnown RBP20.74■□□□□ 0.91
TSSC4-208ENST00000467308 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
TSSC4-208ENST00000467308 ZNF34Q8IZ26 560 aa20.73■□□□□ 0.91
TSSC4-208ENST00000467308 RBM17Q96I25 401 aaKnown RBP20.73■□□□□ 0.91
TSSC4-208ENST00000467308 DDX21Q9NR30 783 aaKnown RBP eCLIP20.73■□□□□ 0.91
TSSC4-208ENST00000467308 GJA3Q9Y6H8 435 aa20.73■□□□□ 0.91
TSSC4-208ENST00000467308 ERBB4Q15303 1308 aa20.73■□□□□ 0.91
TSSC4-208ENST00000467308 GPTP24298 496 aa20.72■□□□□ 0.91
TSSC4-208ENST00000467308 MAP2K1Q02750 393 aaPredicted RBP20.72■□□□□ 0.91
TSSC4-208ENST00000467308 SUSD4Q5VX71 490 aa20.72■□□□□ 0.91
TSSC4-208ENST00000467308 LARGE2Q8N3Y3 721 aa20.72■□□□□ 0.91
TSSC4-208ENST00000467308 PLEKHF1Q96S99 279 aa20.72■□□□□ 0.91
TSSC4-208ENST00000467308 ZBTB3Q9H5J0 574 aa20.72■□□□□ 0.91
TSSC4-208ENST00000467308 ABT1Q9ULW3 272 aaKnown RBP20.72■□□□□ 0.91
TSSC4-208ENST00000467308 WDR33Q9C0J8 1336 aaKnown RBP20.72■□□□□ 0.91
TSSC4-208ENST00000467308 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
TSSC4-208ENST00000467308 MYL6BP14649 208 aa20.71■□□□□ 0.91
TSSC4-208ENST00000467308 SCNN1DP51172 638 aa20.71■□□□□ 0.91
TSSC4-208ENST00000467308 LBX1P52954 281 aa20.71■□□□□ 0.91
TSSC4-208ENST00000467308 NFE2L2Q16236 605 aa20.71■□□□□ 0.91
TSSC4-208ENST00000467308 GIGYF2Q6Y7W6 1299 aaKnown RBP20.71■□□□□ 0.91
TSSC4-208ENST00000467308 NTSR2O95665 410 aa20.7■□□□□ 0.9
TSSC4-208ENST00000467308 USP50Q70EL3 339 aaPredicted RBP20.7■□□□□ 0.9
TSSC4-208ENST00000467308 PPP1R42Q7Z4L9 355 aa20.7■□□□□ 0.9
TSSC4-208ENST00000467308 VPS33BQ9H267 617 aa20.7■□□□□ 0.9
TSSC4-208ENST00000467308 TRPM7Q96QT4 1865 aa20.69■□□□□ 0.9
TSSC4-208ENST00000467308 THSD7BQ9C0I4 1608 aa20.69■□□□□ 0.9
TSSC4-208ENST00000467308 EPS15P42566 896 aa20.69■□□□□ 0.9
TSSC4-208ENST00000467308 PARP10Q53GL7 1025 aa20.69■□□□□ 0.9
TSSC4-208ENST00000467308 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
TSSC4-208ENST00000467308 HSPA8P11142 646 aaKnown RBP20.68■□□□□ 0.9
TSSC4-208ENST00000467308 NIM1KQ8IY84 436 aa20.68■□□□□ 0.9
TSSC4-208ENST00000467308 THUMPD2Q9BTF0 503 aaKnown RBP20.68■□□□□ 0.9
TSSC4-208ENST00000467308 TMX4Q9H1E5 349 aaPredicted RBP20.68■□□□□ 0.9
TSSC4-208ENST00000467308 ANP32CO43423 234 aa20.67■□□□□ 0.9
TSSC4-208ENST00000467308 C3orf67Q6ZVT6 689 aa20.67■□□□□ 0.9
TSSC4-208ENST00000467308 NLRP3Q96P20 1036 aa20.67■□□□□ 0.9
TSSC4-208ENST00000467308 ATP6V0A2Q9Y487 856 aa20.67■□□□□ 0.9
TSSC4-208ENST00000467308 PPIP5K2O43314 1243 aa20.66■□□□□ 0.9
TSSC4-208ENST00000467308 ECE1P42892 770 aa20.66■□□□□ 0.9
TSSC4-208ENST00000467308 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
TSSC4-208ENST00000467308 MAPK8IP3Q9UPT6 1336 aa20.65■□□□□ 0.9
TSSC4-208ENST00000467308 LRP10Q7Z4F1 713 aa20.65■□□□□ 0.9
TSSC4-208ENST00000467308 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.89
TSSC4-208ENST00000467308 CST9Q5W186 159 aa20.64■□□□□ 0.89
TSSC4-208ENST00000467308 SLC51AQ86UW1 340 aa20.64■□□□□ 0.89
TSSC4-208ENST00000467308 SUPT20HQ8NEM7 779 aa20.64■□□□□ 0.89
TSSC4-208ENST00000467308 CAPNS2Q96L46 248 aa20.64■□□□□ 0.89
TSSC4-208ENST00000467308 UTP14AQ9BVJ6 771 aaKnown RBP20.64■□□□□ 0.89
TSSC4-208ENST00000467308 RTFDC1Q9BY42 306 aaPredicted RBP20.64■□□□□ 0.89
TSSC4-208ENST00000467308 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.89
TSSC4-208ENST00000467308 ADARB2Q9NS39 739 aaKnown RBP20.64■□□□□ 0.89
TSSC4-208ENST00000467308 GPRC5DQ9NZD1 345 aa20.64■□□□□ 0.89
TSSC4-208ENST00000467308 PDIA6Q15084 440 aa20.63■□□□□ 0.89
TSSC4-208ENST00000467308 AOC3Q16853 763 aa20.63■□□□□ 0.89
TSSC4-208ENST00000467308 TSPYL4Q9UJ04 414 aa20.63■□□□□ 0.89
TSSC4-208ENST00000467308 ZNRF3Q9ULT6 936 aa20.63■□□□□ 0.89
TSSC4-208ENST00000467308 ANKRD36CQ5JPF3 1778 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 ABCC4O15439 1325 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 BBOX1O75936 387 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 FMR1Q06787 632 aaKnown RBP eCLIP20.62■□□□□ 0.89
TSSC4-208ENST00000467308 RALBP1Q15311 655 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 MIER1Q8N108 512 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 ABHD8Q96I13 439 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 BEGAINQ9BUH8 593 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 BABAM1Q9NWV8 329 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 TLL2Q9Y6L7 1015 aa20.62■□□□□ 0.89
TSSC4-208ENST00000467308 TRAF5O00463 557 aa20.61■□□□□ 0.89
TSSC4-208ENST00000467308 CXCL9Q07325 125 aa20.61■□□□□ 0.89
TSSC4-208ENST00000467308 PAXIP1Q6ZW49 1069 aaPredicted RBP20.61■□□□□ 0.89
TSSC4-208ENST00000467308 GPR101Q96P66 508 aaPredicted RBP20.61■□□□□ 0.89
TSSC4-208ENST00000467308 LAMB2P55268 1798 aa20.61■□□□□ 0.89
TSSC4-208ENST00000467308 CDHR2Q9BYE9 1310 aa20.6■□□□□ 0.89
TSSC4-208ENST00000467308 HSP90AB3PQ58FF7 597 aa20.6■□□□□ 0.89
TSSC4-208ENST00000467308 CYP4F22Q6NT55 531 aa20.6■□□□□ 0.89
TSSC4-208ENST00000467308 SP8Q8IXZ3 490 aa20.6■□□□□ 0.89
TSSC4-208ENST00000467308 EIF2S2P20042 333 aaKnown RBP20.59■□□□□ 0.89
TSSC4-208ENST00000467308 MAP2K2P36507 400 aa20.59■□□□□ 0.89
TSSC4-208ENST00000467308 DPP8Q6V1X1 898 aaPredicted RBP20.59■□□□□ 0.89
TSSC4-208ENST00000467308 PGAP2Q9UHJ9 254 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms