RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 NUDT16Q96DE0 195 aaKnown RBP6.64□□□□□ -1.35
VPS13A-209ENST00000467124 SUSD3Q96L08 255 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 GGNBP2Q9H3C7 697 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 AAASQ9NRG9 546 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 PARP2Q9UGN5 583 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 DNMT3LQ9UJW3 386 aa6.64□□□□□ -1.35
VPS13A-209ENST00000467124 PNMA6FA0A0J9YX94 578 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 LOC105371045A0A1W2PR82 267 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 MAN1A2O60476 641 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 F11P03951 625 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 MSX1P28360 303 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 ITGAEP38570 1179 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 XPCQ01831 940 aaPredicted RBP6.63□□□□□ -1.35
VPS13A-209ENST00000467124 ORC1Q13415 861 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 PGBD3Q8N328 593 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 NEUROD4Q9HD90 331 aa6.63□□□□□ -1.35
VPS13A-209ENST00000467124 FIGNL2A6NMB9 653 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 MICAL2O94851 1124 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 ARSDP51689 593 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 ARSJQ5FYB0 599 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-209ENST00000467124 EFHC2Q5JST6 749 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 FIGNL1Q6PIW4 674 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 PIK3R5Q8WYR1 880 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 GMCL1Q96IK5 515 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 ZIC5Q96T25 663 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
VPS13A-209ENST00000467124 NEFLP07196 543 aa6.61□□□□□ -1.35
VPS13A-209ENST00000467124 BTLAQ7Z6A9 289 aa6.61□□□□□ -1.35
VPS13A-209ENST00000467124 IRX2Q9BZI1 471 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-209ENST00000467124 DMGDHQ9UI17 866 aaKnown RBP6.61□□□□□ -1.35
VPS13A-209ENST00000467124 FNDC3AQ9Y2H6 1198 aaKnown RBP6.61□□□□□ -1.35
VPS13A-209ENST00000467124 GJA3Q9Y6H8 435 aa6.61□□□□□ -1.35
VPS13A-209ENST00000467124 A0A1W2PNR3 127 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 OPLAHO14841 1288 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 PRPF40AO75400 957 aaKnown RBP6.6□□□□□ -1.35
VPS13A-209ENST00000467124 INPP5BP32019 993 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 IDH3AP50213 366 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 ATP2B2Q01814 1243 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 TYRO3Q06418 890 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 PSMD2Q13200 908 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 LRRC69Q6ZNQ3 347 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 TTC16Q8NEE8 873 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 TRIM47Q96LD4 638 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 GPAMQ9HCL2 828 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 MRS2Q9HD23 443 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 VTI1BQ9UEU0 232 aa6.6□□□□□ -1.35
VPS13A-209ENST00000467124 FOXD3Q9UJU5 478 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-209ENST00000467124 SENP3-EIF4A1A0A087X0R7 540 aa6.59□□□□□ -1.35
VPS13A-209ENST00000467124 H7C1W4 665 aa6.59□□□□□ -1.35
VPS13A-209ENST00000467124 FAM157BP0CG42 384 aa6.59□□□□□ -1.35
VPS13A-209ENST00000467124 MRPL58Q14197 206 aaKnown RBP6.59□□□□□ -1.35
VPS13A-209ENST00000467124 USPL1Q5W0Q7 1092 aa6.59□□□□□ -1.35
VPS13A-209ENST00000467124 CMTR1Q8N1G2 835 aaKnown RBP6.59□□□□□ -1.35
VPS13A-209ENST00000467124 ST8SIA5O15466 376 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 VAMP1P23763 118 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 KCNQ4P56696 695 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 LAMC2Q13753 1193 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 ENOX2Q16206 610 aaKnown RBP6.58□□□□□ -1.36
VPS13A-209ENST00000467124 PDE12Q6L8Q7 609 aaKnown RBP6.58□□□□□ -1.36
VPS13A-209ENST00000467124 PI16Q6UXB8 463 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 TMEM87AQ8NBN3 555 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 CSRNP1Q96S65 589 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 CFHR5Q9BXR6 569 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 EFCC1Q9HA90 598 aa6.58□□□□□ -1.36
VPS13A-209ENST00000467124 SLC35F4A4IF30 521 aa6.57□□□□□ -1.36
VPS13A-209ENST00000467124 EIF1AYO14602 144 aaKnown RBP6.57□□□□□ -1.36
VPS13A-209ENST00000467124 EGFRP00533 1210 aa6.57□□□□□ -1.36
VPS13A-209ENST00000467124 POLR3DP05423 398 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-209ENST00000467124 HDLBPQ00341 1268 aaKnown RBP6.57□□□□□ -1.36
VPS13A-209ENST00000467124 TRIP4Q15650 581 aaPredicted RBP6.57□□□□□ -1.36
VPS13A-209ENST00000467124 LDLRAD1Q5T700 205 aa6.57□□□□□ -1.36
VPS13A-209ENST00000467124 XKR5Q6UX68 686 aa6.57□□□□□ -1.36
VPS13A-209ENST00000467124 FBF1Q8TES7 1133 aa6.57□□□□□ -1.36
VPS13A-209ENST00000467124 DNAJC25Q9H1X3 360 aa6.57□□□□□ -1.36
VPS13A-209ENST00000467124 RUBCNLQ9H714 662 aa6.57□□□□□ -1.36
VPS13A-209ENST00000467124 RTCBQ9Y3I0 505 aaKnown RBP6.57□□□□□ -1.36
VPS13A-209ENST00000467124 SORBS3O60504 671 aa6.56□□□□□ -1.36
VPS13A-209ENST00000467124 ERCC5P28715 1186 aaPredicted RBP6.56□□□□□ -1.36
VPS13A-209ENST00000467124 IRS1P35568 1242 aa6.56□□□□□ -1.36
VPS13A-209ENST00000467124 PTSQ03393 145 aa6.56□□□□□ -1.36
VPS13A-209ENST00000467124 TRIM22Q8IYM9 498 aa6.56□□□□□ -1.36
VPS13A-209ENST00000467124 SNX29Q8TEQ0 813 aa6.56□□□□□ -1.36
VPS13A-209ENST00000467124 UBAP1LF5GYI3 381 aa6.55□□□□□ -1.36
VPS13A-209ENST00000467124 EFSO43281 561 aa6.55□□□□□ -1.36
VPS13A-209ENST00000467124 DAB2P98082 770 aa6.55□□□□□ -1.36
VPS13A-209ENST00000467124 TMC4Q7Z404 712 aa6.55□□□□□ -1.36
VPS13A-209ENST00000467124 CEP63Q96MT8 703 aa6.55□□□□□ -1.36
VPS13A-209ENST00000467124 GAS2L1Q99501 681 aaPredicted RBP6.55□□□□□ -1.36
VPS13A-209ENST00000467124 NUCKS1Q9H1E3 243 aaKnown RBP6.55□□□□□ -1.36
VPS13A-209ENST00000467124 BRD7Q9NPI1 651 aa6.55□□□□□ -1.36
VPS13A-209ENST00000467124 PPP1R1BQ9UD71 204 aaPredicted RBP6.55□□□□□ -1.36
VPS13A-209ENST00000467124 PCDHGC4Q9Y5F7 938 aa6.55□□□□□ -1.36
VPS13A-209ENST00000467124 SOBPA7XYQ1 873 aa6.54□□□□□ -1.36
VPS13A-209ENST00000467124 ATXN7O15265 892 aaPredicted RBP6.54□□□□□ -1.36
VPS13A-209ENST00000467124 GRNP28799 593 aaKnown RBP6.54□□□□□ -1.36
VPS13A-209ENST00000467124 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS13A-209ENST00000467124 ALG1LQ6GMV1 187 aa6.54□□□□□ -1.36
VPS13A-209ENST00000467124 ZNF438Q7Z4V0 828 aa6.54□□□□□ -1.36
VPS13A-209ENST00000467124 CCDC155Q8N6L0 562 aa6.54□□□□□ -1.36
VPS13A-209ENST00000467124 EPS8L3Q8TE67 593 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms