RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PHACTR1Q9C0D0 580 aa9.79□□□□□ -0.84
XRN1-206ENST00000467077 EFCC1Q9HA90 598 aa9.79□□□□□ -0.84
XRN1-206ENST00000467077 PCMTD2Q9NV79 361 aa9.79□□□□□ -0.84
XRN1-206ENST00000467077 HIRAP54198 1017 aaPredicted RBP9.77□□□□□ -0.85
XRN1-206ENST00000467077 HIF1AQ16665 826 aa9.77□□□□□ -0.85
XRN1-206ENST00000467077 DTWD1Q8N5C7 304 aa9.77□□□□□ -0.85
XRN1-206ENST00000467077 SUSD3Q96L08 255 aa9.77□□□□□ -0.85
XRN1-206ENST00000467077 DNAJB12Q9NXW2 375 aaKnown RBP9.77□□□□□ -0.85
XRN1-206ENST00000467077 HCN4Q9Y3Q4 1203 aa9.77□□□□□ -0.85
XRN1-206ENST00000467077 BRPF1P55201 1214 aaPredicted RBP9.76□□□□□ -0.85
XRN1-206ENST00000467077 TRIM50Q86XT4 487 aa9.76□□□□□ -0.85
XRN1-206ENST00000467077 NFATC2IPQ8NCF5 419 aa9.76□□□□□ -0.85
XRN1-206ENST00000467077 WFDC12Q8WWY7 111 aa9.76□□□□□ -0.85
XRN1-206ENST00000467077 TXKP42681 527 aa9.75□□□□□ -0.85
XRN1-206ENST00000467077 IREB2P48200 963 aaKnown RBP9.75□□□□□ -0.85
XRN1-206ENST00000467077 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
XRN1-206ENST00000467077 TPCN2Q8NHX9 752 aa9.75□□□□□ -0.85
XRN1-206ENST00000467077 TSPAN10Q9H1Z9 355 aaPredicted RBP9.75□□□□□ -0.85
XRN1-206ENST00000467077 KRTAP4-8A0A0G2JLE6 195 aa9.74□□□□□ -0.85
XRN1-206ENST00000467077 COBLO75128 1261 aa9.74□□□□□ -0.85
XRN1-206ENST00000467077 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
XRN1-206ENST00000467077 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
XRN1-206ENST00000467077 PCSK7Q16549 785 aa9.73□□□□□ -0.85
XRN1-206ENST00000467077 BTLAQ7Z6A9 289 aa9.73□□□□□ -0.85
XRN1-206ENST00000467077 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.73□□□□□ -0.85
XRN1-206ENST00000467077 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
XRN1-206ENST00000467077 ATP1A2P50993 1020 aa9.72□□□□□ -0.85
XRN1-206ENST00000467077 PRR23CQ6ZRP0 262 aa9.72□□□□□ -0.85
XRN1-206ENST00000467077 FBXO11Q86XK2 927 aa9.72□□□□□ -0.85
XRN1-206ENST00000467077 NFKB1P19838 968 aa9.71□□□□□ -0.86
XRN1-206ENST00000467077 NOS3P29474 1203 aa9.71□□□□□ -0.86
XRN1-206ENST00000467077 FAM35AQ86V20 835 aa9.71□□□□□ -0.86
XRN1-206ENST00000467077 DEPDC4Q8N2C3 294 aa9.71□□□□□ -0.86
XRN1-206ENST00000467077 COL17A1Q9UMD9 1497 aaPredicted RBP9.71□□□□□ -0.86
XRN1-206ENST00000467077 PPP1R12BO60237 982 aaPredicted RBP9.7□□□□□ -0.86
XRN1-206ENST00000467077 YBX3P16989 372 aaKnown RBP eCLIP9.7□□□□□ -0.869e-7■■□□□ 13.3
XRN1-206ENST00000467077 WFDC8Q8IUA0 241 aa9.7□□□□□ -0.86
XRN1-206ENST00000467077 MEGF10Q96KG7 1140 aa9.7□□□□□ -0.86
XRN1-206ENST00000467077 CPB1P15086 417 aa9.69□□□□□ -0.86
XRN1-206ENST00000467077 IRAK1P51617 712 aa9.69□□□□□ -0.86
XRN1-206ENST00000467077 CCINQ13939 588 aa9.69□□□□□ -0.86
XRN1-206ENST00000467077 CCDC102BQ68D86 513 aa9.69□□□□□ -0.86
XRN1-206ENST00000467077 POTEAQ6S8J7 498 aa9.69□□□□□ -0.86
XRN1-206ENST00000467077 IGF2-ASQ6U949 168 aa9.69□□□□□ -0.86
XRN1-206ENST00000467077 WWC1Q8IX03 1113 aa9.69□□□□□ -0.86
XRN1-206ENST00000467077 RBM19Q9Y4C8 960 aaKnown RBP9.69□□□□□ -0.86
XRN1-206ENST00000467077 SSTR4P31391 388 aa9.68□□□□□ -0.86
XRN1-206ENST00000467077 SLC51AQ86UW1 340 aa9.68□□□□□ -0.86
XRN1-206ENST00000467077 ALDH16A1Q8IZ83 802 aa9.68□□□□□ -0.86
XRN1-206ENST00000467077 FRRS1LQ9P0K9 344 aa9.68□□□□□ -0.86
XRN1-206ENST00000467077 EPB42P16452 691 aa9.67□□□□□ -0.86
XRN1-206ENST00000467077 FSTP19883 344 aa9.67□□□□□ -0.86
XRN1-206ENST00000467077 GSX2Q9BZM3 304 aa9.67□□□□□ -0.86
XRN1-206ENST00000467077 M0R2N6 131 aa9.66□□□□□ -0.86
XRN1-206ENST00000467077 PTCD1O75127 700 aaKnown RBP9.66□□□□□ -0.86
XRN1-206ENST00000467077 ELMSAN1Q6PJG2 1045 aa9.66□□□□□ -0.86
XRN1-206ENST00000467077 KIAA1024Q9UPX6 916 aa9.66□□□□□ -0.86
XRN1-206ENST00000467077 IER5Q5VY09 327 aa9.65□□□□□ -0.86
XRN1-206ENST00000467077 ILDR2Q71H61 639 aa9.65□□□□□ -0.86
XRN1-206ENST00000467077 NGLY1Q96IV0 654 aa9.65□□□□□ -0.86
XRN1-206ENST00000467077 LPIN3Q9BQK8 851 aa9.64□□□□□ -0.87
XRN1-206ENST00000467077 ALG2Q9H553 416 aa9.64□□□□□ -0.87
XRN1-206ENST00000467077 AKTIPQ9H8T0 292 aa9.64□□□□□ -0.87
XRN1-206ENST00000467077 TGFBR3LH3BV60 316 aa9.62□□□□□ -0.87
XRN1-206ENST00000467077 CD97P48960 835 aa9.62□□□□□ -0.87
XRN1-206ENST00000467077 TSEN2Q8NCE0 465 aaKnown RBP9.62□□□□□ -0.87
XRN1-206ENST00000467077 FMNL2Q96PY5 1086 aa9.62□□□□□ -0.87
XRN1-206ENST00000467077 USP17L3A6NCW0 530 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 USP17L4A6NCW7 530 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 ARID4AP29374 1257 aaPredicted RBP9.61□□□□□ -0.87
XRN1-206ENST00000467077 CLDN10P78369 228 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 GRIK5Q16478 980 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 PERM1Q5SV97 790 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 USP17L2Q6R6M4 530 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 USP17L1Q7RTZ2 530 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 STAG2Q8N3U4 1231 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 LARGE2Q8N3Y3 721 aa9.61□□□□□ -0.87
XRN1-206ENST00000467077 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
XRN1-206ENST00000467077 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
XRN1-206ENST00000467077 GSC2O15499 205 aa9.6□□□□□ -0.87
XRN1-206ENST00000467077 MAP3K6O95382 1288 aa9.6□□□□□ -0.87
XRN1-206ENST00000467077 MCM6Q14566 821 aa9.6□□□□□ -0.87
XRN1-206ENST00000467077 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
XRN1-206ENST00000467077 DZIP1LQ8IYY4 767 aaKnown RBP9.6□□□□□ -0.87
XRN1-206ENST00000467077 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
XRN1-206ENST00000467077 MRPL18Q9H0U6 180 aaKnown RBP9.6□□□□□ -0.87
XRN1-206ENST00000467077 GPLD1P80108 840 aa9.59□□□□□ -0.87
XRN1-206ENST00000467077 RTN1Q16799 776 aa9.59□□□□□ -0.87
XRN1-206ENST00000467077 KRT25Q7Z3Z0 450 aa9.59□□□□□ -0.87
XRN1-206ENST00000467077 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
XRN1-206ENST00000467077 DCAF11Q8TEB1 546 aa9.59□□□□□ -0.87
XRN1-206ENST00000467077 TTC9Q92623 222 aa9.59□□□□□ -0.87
XRN1-206ENST00000467077 C2orf49Q9BVC5 232 aaPredicted RBP9.59□□□□□ -0.87
XRN1-206ENST00000467077 MLLT1Q03111 559 aaPredicted RBP9.58□□□□□ -0.88
XRN1-206ENST00000467077 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
XRN1-206ENST00000467077 TRPM4Q8TD43 1214 aa9.58□□□□□ -0.88
XRN1-206ENST00000467077 ZNF594Q96JF6 807 aaPredicted RBP9.58□□□□□ -0.88
XRN1-206ENST00000467077 SMG9Q9H0W8 520 aaKnown RBP9.58□□□□□ -0.88
XRN1-206ENST00000467077 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms