RNA–Protein interactions for RNA: ENST00000467047.1

PCK1-202, Transcript of phosphoenolpyruvate carboxykinase 1, humanhuman

TSL 1 (best)

Gene PCK1, Length 5,074 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1-202ENST00000467047 SMARCA5O60264 1052 aaPredicted RBP12.19□□□□□ -0.46
PCK1-202ENST00000467047 GUCY1B3Q02153 619 aa12.19□□□□□ -0.46
PCK1-202ENST00000467047 CWC25Q9NXE8 425 aaPredicted RBP12.19□□□□□ -0.46
PCK1-202ENST00000467047 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
PCK1-202ENST00000467047 EHBP1L1Q8N3D4 1523 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 PABPN1LA6NDY0 278 aaKnown RBP12.18□□□□□ -0.46
PCK1-202ENST00000467047 URI1O94763 535 aaPredicted RBP12.18□□□□□ -0.46
PCK1-202ENST00000467047 ALS2CR12Q96Q35 445 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCK1-202ENST00000467047 CPSF2Q9P2I0 782 aaKnown RBP12.18□□□□□ -0.46
PCK1-202ENST00000467047 PTPRCP08575 1304 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
PCK1-202ENST00000467047 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
PCK1-202ENST00000467047 CASQ1P31415 396 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 ACTN2P35609 894 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 GABPB1Q06547 395 aaPredicted RBP12.18□□□□□ -0.46
PCK1-202ENST00000467047 NME9Q86XW9 330 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 ZKSCAN5Q9Y2L8 839 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 TMEM67Q5HYA8 995 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 KANK3Q6NY19 840 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 SYCP3Q8IZU3 236 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 SAMM50Q9Y512 469 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 LMAN1P49257 510 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 GSTO1P78417 241 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 CCDC174Q6PII3 467 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 SRRTQ9BXP5 876 aaKnown RBP12.18□□□□□ -0.46
PCK1-202ENST00000467047 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
PCK1-202ENST00000467047 UQCRFS1P1P0C7P4 283 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 FLIIQ13045 1269 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 RFC4P35249 363 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 GIGYF2Q6Y7W6 1299 aaKnown RBP12.17□□□□□ -0.46
PCK1-202ENST00000467047 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 F6X3S4 739 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 RARSP54136 660 aaKnown RBP12.17□□□□□ -0.46
PCK1-202ENST00000467047 USP37Q86T82 979 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 SPATA24Q86W54 205 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 WASLO00401 505 aaPredicted RBP12.17□□□□□ -0.46
PCK1-202ENST00000467047 TRERF1Q96PN7 1200 aa12.17□□□□□ -0.46
PCK1-202ENST00000467047 CRNKL1Q9BZJ0 848 aaKnown RBP12.17□□□□□ -0.46
PCK1-202ENST00000467047 A0A1B0GUL7 405 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 PRC1O43663 620 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 CCDC172P0C7W6 258 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 ERMNQ8TAM6 284 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 FSD2A1L4K1 749 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 GOLIM4O00461 696 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 STX6O43752 255 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 XRCC6P12956 609 aaKnown RBP eCLIP12.16□□□□□ -0.46
PCK1-202ENST00000467047 VAT1LQ9HCJ6 419 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
PCK1-202ENST00000467047 KRT28Q7Z3Y7 464 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 DNA2P51530 1060 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 ST5P78524 1137 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 CADPS2Q86UW7 1296 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 NCOA7Q8NI08 942 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 PPM1EQ8WY54 764 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 HOMER2Q9NSB8 354 aa12.16□□□□□ -0.46
PCK1-202ENST00000467047 ORC3Q9UBD5 711 aaPredicted RBP12.16□□□□□ -0.46
PCK1-202ENST00000467047 HMGB1P1B2RPK0 211 aaPredicted RBP12.15□□□□□ -0.46
PCK1-202ENST00000467047 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
PCK1-202ENST00000467047 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
PCK1-202ENST00000467047 SPECC1LQ69YQ0 1117 aa12.15□□□□□ -0.46
PCK1-202ENST00000467047 CPLX3Q8WVH0 158 aa12.15□□□□□ -0.46
PCK1-202ENST00000467047 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
PCK1-202ENST00000467047 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
PCK1-202ENST00000467047 TUBBP07437 444 aa12.15□□□□□ -0.46
PCK1-202ENST00000467047 HLTFQ14527 1009 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCK1-202ENST00000467047 RNF187Q5TA31 235 aaPredicted RBP12.15□□□□□ -0.46
PCK1-202ENST00000467047 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
PCK1-202ENST00000467047 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCK1-202ENST00000467047 EPRSP07814 1512 aaKnown RBP12.15□□□□□ -0.46
PCK1-202ENST00000467047 MRC2Q9UBG0 1479 aa12.15□□□□□ -0.47
PCK1-202ENST00000467047 BMP15O95972 392 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 SNRPA1P09661 255 aaKnown RBP12.14□□□□□ -0.47
PCK1-202ENST00000467047 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 CCDC102BQ68D86 513 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
PCK1-202ENST00000467047 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
PCK1-202ENST00000467047 TNPO1Q92973 898 aaKnown RBP12.14□□□□□ -0.47
PCK1-202ENST00000467047 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 TSNARE1Q96NA8 513 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 HDAC9Q9UKV0 1011 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 SSX2IPQ9Y2D8 614 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 CCDC175P0C221 793 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 HSPA4P34932 840 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 METAP2P50579 478 aaKnown RBP eCLIP12.14□□□□□ -0.47
PCK1-202ENST00000467047 UBE4AQ14139 1066 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 ZGPATQ8N5A5 531 aaKnown RBP12.14□□□□□ -0.47
PCK1-202ENST00000467047 LRRC45Q96CN5 670 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 NOP2P46087 812 aaKnown RBP12.14□□□□□ -0.47
PCK1-202ENST00000467047 IFI16Q16666 785 aaKnown RBP12.14□□□□□ -0.47
PCK1-202ENST00000467047 CEP135Q66GS9 1140 aa12.14□□□□□ -0.47
PCK1-202ENST00000467047 MICU3Q86XE3 530 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms