RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 KIF13BQ9NQT8 1826 aa12.79□□□□□ -0.36
C9orf135-202ENST00000466872 MAP3K7O43318 606 aa12.79□□□□□ -0.36
C9orf135-202ENST00000466872 SSFA2P28290 1259 aa12.79□□□□□ -0.36
C9orf135-202ENST00000466872 TMPOP42166 694 aaKnown RBP12.79□□□□□ -0.36
C9orf135-202ENST00000466872 TSR1Q2NL82 804 aaKnown RBP12.79□□□□□ -0.36
C9orf135-202ENST00000466872 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
C9orf135-202ENST00000466872 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
C9orf135-202ENST00000466872 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
C9orf135-202ENST00000466872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
C9orf135-202ENST00000466872 CYP19A1P11511 503 aaPredicted RBP12.78□□□□□ -0.36
C9orf135-202ENST00000466872 COL9A1P20849 921 aa12.78□□□□□ -0.36
C9orf135-202ENST00000466872 TEFQ10587 303 aa12.78□□□□□ -0.36
C9orf135-202ENST00000466872 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
C9orf135-202ENST00000466872 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
C9orf135-202ENST00000466872 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
C9orf135-202ENST00000466872 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
C9orf135-202ENST00000466872 TK2O00142 265 aa12.77□□□□□ -0.37
C9orf135-202ENST00000466872 GNPATO15228 680 aa12.77□□□□□ -0.37
C9orf135-202ENST00000466872 CRKLP46109 303 aaKnown RBP12.77□□□□□ -0.37
C9orf135-202ENST00000466872 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
C9orf135-202ENST00000466872 RUNDC1Q96C34 613 aa12.77□□□□□ -0.37
C9orf135-202ENST00000466872 AK7Q96M32 723 aa12.77□□□□□ -0.37
C9orf135-202ENST00000466872 THUMPD2Q9BTF0 503 aaKnown RBP12.77□□□□□ -0.37
C9orf135-202ENST00000466872 RPS6KA4O75676 772 aa12.76□□□□□ -0.37
C9orf135-202ENST00000466872 SPNS2Q8IVW8 549 aa12.76□□□□□ -0.37
C9orf135-202ENST00000466872 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
C9orf135-202ENST00000466872 SOS1Q07889 1333 aaPredicted RBP12.76□□□□□ -0.37
C9orf135-202ENST00000466872 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
C9orf135-202ENST00000466872 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
C9orf135-202ENST00000466872 PRAMEF22A3QJZ6 481 aa12.75□□□□□ -0.37
C9orf135-202ENST00000466872 BTBD11A6QL63 1104 aa12.75□□□□□ -0.37
C9orf135-202ENST00000466872 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
C9orf135-202ENST00000466872 FLAD1Q8NFF5 587 aa12.75□□□□□ -0.37
C9orf135-202ENST00000466872 PNNQ9H307 717 aaKnown RBP12.75□□□□□ -0.37
C9orf135-202ENST00000466872 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
C9orf135-202ENST00000466872 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
C9orf135-202ENST00000466872 RIPK4P57078 832 aa12.74□□□□□ -0.37
C9orf135-202ENST00000466872 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
C9orf135-202ENST00000466872 TAF7Q15545 349 aaPredicted RBP12.74□□□□□ -0.37
C9orf135-202ENST00000466872 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
C9orf135-202ENST00000466872 RTF1Q92541 710 aaKnown RBP12.74□□□□□ -0.37
C9orf135-202ENST00000466872 CCDC87Q9NVE4 849 aa12.74□□□□□ -0.37
C9orf135-202ENST00000466872 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
C9orf135-202ENST00000466872 ANP32CO43423 234 aa12.73□□□□□ -0.37
C9orf135-202ENST00000466872 SMYD5Q6GMV2 418 aa12.73□□□□□ -0.37
C9orf135-202ENST00000466872 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
C9orf135-202ENST00000466872 VPS9D1Q9Y2B5 631 aa12.73□□□□□ -0.37
C9orf135-202ENST00000466872 UTRNP46939 3433 aa12.73□□□□□ -0.37
C9orf135-202ENST00000466872 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
C9orf135-202ENST00000466872 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
C9orf135-202ENST00000466872 COL15A1P39059 1388 aa12.72□□□□□ -0.37
C9orf135-202ENST00000466872 USP42Q9H9J4 1324 aaKnown RBP12.72□□□□□ -0.37
C9orf135-202ENST00000466872 HRO43593 1189 aa12.72□□□□□ -0.37
C9orf135-202ENST00000466872 GYS1P13807 737 aa12.72□□□□□ -0.37
C9orf135-202ENST00000466872 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
C9orf135-202ENST00000466872 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
C9orf135-202ENST00000466872 TTC5Q8N0Z6 440 aa12.72□□□□□ -0.37
C9orf135-202ENST00000466872 FMNL2Q96PY5 1086 aa12.72□□□□□ -0.37
C9orf135-202ENST00000466872 CDHR5Q9HBB8 845 aa12.72□□□□□ -0.37
C9orf135-202ENST00000466872 RTCBQ9Y3I0 505 aaKnown RBP12.72□□□□□ -0.37
C9orf135-202ENST00000466872 EIF4A1P60842 406 aaKnown RBP12.71□□□□□ -0.37
C9orf135-202ENST00000466872 ARXQ96QS3 562 aa12.71□□□□□ -0.37
C9orf135-202ENST00000466872 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
C9orf135-202ENST00000466872 APAF1O14727 1248 aa12.7□□□□□ -0.38
C9orf135-202ENST00000466872 NEFMP07197 916 aa12.7□□□□□ -0.38
C9orf135-202ENST00000466872 TRAPPC3LQ5T215 181 aa12.7□□□□□ -0.38
C9orf135-202ENST00000466872 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
C9orf135-202ENST00000466872 MRS2Q9HD23 443 aa12.7□□□□□ -0.38
C9orf135-202ENST00000466872 NPDC1Q9NQX5 325 aaPredicted RBP12.7□□□□□ -0.38
C9orf135-202ENST00000466872 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
C9orf135-202ENST00000466872 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
C9orf135-202ENST00000466872 CHL1O00533 1208 aa12.69□□□□□ -0.38
C9orf135-202ENST00000466872 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
C9orf135-202ENST00000466872 ZNF853P0CG23 659 aa12.69□□□□□ -0.38
C9orf135-202ENST00000466872 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
C9orf135-202ENST00000466872 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
C9orf135-202ENST00000466872 SYT17Q9BSW7 474 aa12.69□□□□□ -0.38
C9orf135-202ENST00000466872 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
C9orf135-202ENST00000466872 ANKRD31Q8N7Z5 1873 aa12.69□□□□□ -0.38
C9orf135-202ENST00000466872 C10orf71Q711Q0 1435 aa12.69□□□□□ -0.38
C9orf135-202ENST00000466872 NUP98P52948 1817 aa12.68□□□□□ -0.38
C9orf135-202ENST00000466872 A1BGP04217 495 aa12.68□□□□□ -0.38
C9orf135-202ENST00000466872 SNRPA1P09661 255 aaKnown RBP12.68□□□□□ -0.38
C9orf135-202ENST00000466872 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
C9orf135-202ENST00000466872 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
C9orf135-202ENST00000466872 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
C9orf135-202ENST00000466872 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
C9orf135-202ENST00000466872 N4BP2Q86UW6 1770 aaPredicted RBP12.68□□□□□ -0.38
C9orf135-202ENST00000466872 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
C9orf135-202ENST00000466872 BHMG1C9JSJ3 638 aaPredicted RBP12.67□□□□□ -0.38
C9orf135-202ENST00000466872 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
C9orf135-202ENST00000466872 DDR1Q08345 913 aa12.67□□□□□ -0.38
C9orf135-202ENST00000466872 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
C9orf135-202ENST00000466872 RBM26Q5T8P6 1007 aaKnown RBP12.67□□□□□ -0.38
C9orf135-202ENST00000466872 NARFQ9UHQ1 456 aa12.67□□□□□ -0.38
C9orf135-202ENST00000466872 STARD3NLO95772 234 aa12.66□□□□□ -0.38
C9orf135-202ENST00000466872 POLD1P28340 1107 aa12.66□□□□□ -0.38
C9orf135-202ENST00000466872 TM4SF1P30408 202 aa12.66□□□□□ -0.38
C9orf135-202ENST00000466872 PIP4K2AP48426 406 aaPredicted RBP12.66□□□□□ -0.38
C9orf135-202ENST00000466872 NLGN2Q8NFZ4 835 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms