RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 USP17L15C9J2P7 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L10C9JJH3 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L13C9JLJ4 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L12C9JPN9 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L11C9JVI0 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L21D6R901 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L18D6R9N7 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L22D6RA61 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L17D6RBQ6 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L19D6RCP7 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L20D6RJB6 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 K7ELQ4 463 aaPredicted RBP7.47□□□□□ -1.21
CCDC58-203ENST00000466854 M0R082 166 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 ALBP02768 609 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 FURINP09958 794 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 ALAS2P22557 587 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 ADH7P40394 386 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 USP17L24Q0WX57 530 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 LARP1Q6PKG0 1096 aaKnown RBP7.47□□□□□ -1.21
CCDC58-203ENST00000466854 C8orf86Q6ZUL3 223 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 BTLAQ7Z6A9 289 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 ZNF417Q8TAU3 575 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 CHMP7Q8WUX9 453 aaPredicted RBP7.47□□□□□ -1.21
CCDC58-203ENST00000466854 NGLY1Q96IV0 654 aa7.47□□□□□ -1.21
CCDC58-203ENST00000466854 ZNF587Q96SQ5 575 aaPredicted RBP7.47□□□□□ -1.21
CCDC58-203ENST00000466854 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
CCDC58-203ENST00000466854 LCE1DQ5T752 114 aa7.46□□□□□ -1.22
CCDC58-203ENST00000466854 ARXQ96QS3 562 aa7.46□□□□□ -1.22
CCDC58-203ENST00000466854 BCS1LQ9Y276 419 aa7.46□□□□□ -1.22
CCDC58-203ENST00000466854 SPATA31C1P0DKV0 1188 aa7.45□□□□□ -1.22
CCDC58-203ENST00000466854 LMOD1P29536 600 aaPredicted RBP7.45□□□□□ -1.22
CCDC58-203ENST00000466854 RTN1Q16799 776 aa7.45□□□□□ -1.22
CCDC58-203ENST00000466854 ANKMY2Q8IV38 441 aa7.45□□□□□ -1.22
CCDC58-203ENST00000466854 MICALL1Q8N3F8 863 aa7.45□□□□□ -1.22
CCDC58-203ENST00000466854 HINFPQ9BQA5 517 aa7.45□□□□□ -1.22
CCDC58-203ENST00000466854 PRDM6Q9NQX0 595 aa7.45□□□□□ -1.22
CCDC58-203ENST00000466854 DMGDHQ9UI17 866 aaKnown RBP7.45□□□□□ -1.22
CCDC58-203ENST00000466854 NID1P14543 1247 aa7.44□□□□□ -1.22
CCDC58-203ENST00000466854 IGFBP4P22692 258 aa7.44□□□□□ -1.22
CCDC58-203ENST00000466854 GRNP28799 593 aaKnown RBP7.44□□□□□ -1.22
CCDC58-203ENST00000466854 NEUROD1Q13562 356 aa7.44□□□□□ -1.22
CCDC58-203ENST00000466854 IER5Q5VY09 327 aa7.44□□□□□ -1.22
CCDC58-203ENST00000466854 C20orf204Q6ZNR8 217 aa7.44□□□□□ -1.22
CCDC58-203ENST00000466854 BHMTQ93088 406 aa7.44□□□□□ -1.22
CCDC58-203ENST00000466854 TGFBR3LH3BV60 316 aa7.43□□□□□ -1.22
CCDC58-203ENST00000466854 CFAP70Q5T0N1 1121 aa7.43□□□□□ -1.22
CCDC58-203ENST00000466854 VRTNQ9H8Y1 702 aa7.43□□□□□ -1.22
CCDC58-203ENST00000466854 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
CCDC58-203ENST00000466854 HIF1AQ16665 826 aa7.42□□□□□ -1.22
CCDC58-203ENST00000466854 ITGB7P26010 798 aa7.41□□□□□ -1.22
CCDC58-203ENST00000466854 WEE1P30291 646 aa7.41□□□□□ -1.22
CCDC58-203ENST00000466854 KRTAP17-1Q9BYP8 105 aa7.41□□□□□ -1.22
CCDC58-203ENST00000466854 GSX2Q9BZM3 304 aa7.41□□□□□ -1.22
CCDC58-203ENST00000466854 SPDYE3A6NKU9 549 aa7.4□□□□□ -1.22
CCDC58-203ENST00000466854 DOC2BQ14184 412 aa7.4□□□□□ -1.22
CCDC58-203ENST00000466854 QTRT2Q9H974 415 aaKnown RBP7.4□□□□□ -1.22
CCDC58-203ENST00000466854 KLK14Q9P0G3 267 aa7.4□□□□□ -1.22
CCDC58-203ENST00000466854 NAGPAQ9UK23 515 aa7.4□□□□□ -1.22
CCDC58-203ENST00000466854 SLC6A14Q9UN76 642 aa7.4□□□□□ -1.22
CCDC58-203ENST00000466854 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
CCDC58-203ENST00000466854 PRRT3Q5FWE3 981 aa7.39□□□□□ -1.23
CCDC58-203ENST00000466854 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
CCDC58-203ENST00000466854 ZNF777Q9ULD5 760 aaPredicted RBP7.39□□□□□ -1.23
CCDC58-203ENST00000466854 FOXO3O43524 673 aa7.38□□□□□ -1.23
CCDC58-203ENST00000466854 NFKB1P19838 968 aa7.38□□□□□ -1.23
CCDC58-203ENST00000466854 INPP5BP32019 993 aa7.38□□□□□ -1.23
CCDC58-203ENST00000466854 GATA4P43694 442 aa7.38□□□□□ -1.23
CCDC58-203ENST00000466854 IDH3AP50213 366 aa7.38□□□□□ -1.23
CCDC58-203ENST00000466854 DGKZQ13574 1117 aa7.38□□□□□ -1.23
CCDC58-203ENST00000466854 EFCC1Q9HA90 598 aa7.38□□□□□ -1.23
CCDC58-203ENST00000466854 DNAJB12Q9NXW2 375 aaKnown RBP7.38□□□□□ -1.23
CCDC58-203ENST00000466854 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.38□□□□□ -1.23
CCDC58-203ENST00000466854 LILRB5O75023 590 aa7.37□□□□□ -1.23
CCDC58-203ENST00000466854 CCINQ13939 588 aa7.37□□□□□ -1.23
CCDC58-203ENST00000466854 GRIK4Q16099 956 aa7.37□□□□□ -1.23
CCDC58-203ENST00000466854 CDCA8Q53HL2 280 aa7.37□□□□□ -1.23
CCDC58-203ENST00000466854 IGFLR1Q9H665 355 aa7.37□□□□□ -1.23
CCDC58-203ENST00000466854 TRIM28Q13263 835 aaKnown RBP7.36□□□□□ -1.23
CCDC58-203ENST00000466854 NUDT8Q8WV74 236 aa7.36□□□□□ -1.23
CCDC58-203ENST00000466854 MYO19Q96H55 970 aa7.36□□□□□ -1.23
CCDC58-203ENST00000466854 JPH1Q9HDC5 661 aaPredicted RBP7.36□□□□□ -1.23
CCDC58-203ENST00000466854 ZFATQ9P243 1243 aa7.36□□□□□ -1.23
CCDC58-203ENST00000466854 PSAPL1Q6NUJ1 521 aa7.35□□□□□ -1.23
CCDC58-203ENST00000466854 ILDR2Q71H61 639 aa7.35□□□□□ -1.23
CCDC58-203ENST00000466854 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
CCDC58-203ENST00000466854 PNMA5Q96PV4 448 aa7.35□□□□□ -1.23
CCDC58-203ENST00000466854 KRTAP4-2Q9BYR5 136 aa7.35□□□□□ -1.23
CCDC58-203ENST00000466854 TPSG1Q9NRR2 321 aa7.35□□□□□ -1.23
CCDC58-203ENST00000466854 LRFN2Q9ULH4 789 aa7.35□□□□□ -1.23
CCDC58-203ENST00000466854 GTF3C3Q9Y5Q9 886 aa7.35□□□□□ -1.23
CCDC58-203ENST00000466854 A0A0A0MRY4 1105 aa7.34□□□□□ -1.23
CCDC58-203ENST00000466854 APBA3O96018 575 aa7.34□□□□□ -1.23
CCDC58-203ENST00000466854 EPB42P16452 691 aa7.34□□□□□ -1.23
CCDC58-203ENST00000466854 ARSDP51689 593 aa7.34□□□□□ -1.23
CCDC58-203ENST00000466854 AFF1P51825 1210 aaKnown RBP7.34□□□□□ -1.23
CCDC58-203ENST00000466854 RSPO4Q2I0M5 234 aaPredicted RBP7.34□□□□□ -1.23
CCDC58-203ENST00000466854 TRAPPC3LQ5T215 181 aa7.34□□□□□ -1.23
CCDC58-203ENST00000466854 SEMA6BQ9H3T3 888 aa7.34□□□□□ -1.23
CCDC58-203ENST00000466854 ZMIZ1Q9ULJ6 1067 aa7.34□□□□□ -1.23
CCDC58-203ENST00000466854 NOVA2Q9UNW9 492 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms