RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 IGKV5-2P06315 115 aa18.38■□□□□ 0.53
DNMT3A-208ENST00000466601 TGFB2P61812 414 aa18.38■□□□□ 0.53
DNMT3A-208ENST00000466601 ERFEQ4G0M1 354 aa18.38■□□□□ 0.53
DNMT3A-208ENST00000466601 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
DNMT3A-208ENST00000466601 CWF19L2Q2TBE0 894 aaKnown RBP18.37■□□□□ 0.53
DNMT3A-208ENST00000466601 SLC4A10Q6U841 1118 aa18.37■□□□□ 0.53
DNMT3A-208ENST00000466601 LINS1Q8NG48 757 aa18.37■□□□□ 0.53
DNMT3A-208ENST00000466601 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
DNMT3A-208ENST00000466601 KIF16BQ96L93 1317 aa18.37■□□□□ 0.53
DNMT3A-208ENST00000466601 KIF13BQ9NQT8 1826 aa18.37■□□□□ 0.53
DNMT3A-208ENST00000466601 NEURL1BA8MQ27 555 aa18.36■□□□□ 0.53
DNMT3A-208ENST00000466601 PDE6BP35913 854 aa18.36■□□□□ 0.53
DNMT3A-208ENST00000466601 BEND3Q5T5X7 828 aa18.36■□□□□ 0.53
DNMT3A-208ENST00000466601 SH3TC1Q8TE82 1336 aa18.36■□□□□ 0.53
DNMT3A-208ENST00000466601 ABCC12Q96J65 1359 aa18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 IPO8O15397 1037 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 DPEP1P16444 411 aa18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 ZBTB38Q8NAP3 1195 aaPredicted RBP18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 FRAT1Q92837 279 aaPredicted RBP18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 FAM89AQ96GI7 184 aa18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 API5Q9BZZ5 524 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-208ENST00000466601 PXDNLA1KZ92 1463 aa18.34■□□□□ 0.53
DNMT3A-208ENST00000466601 CHRNA5P30532 468 aa18.34■□□□□ 0.53
DNMT3A-208ENST00000466601 RTL5Q5HYW3 569 aaPredicted RBP18.34■□□□□ 0.53
DNMT3A-208ENST00000466601 SLC10A5Q5PT55 438 aa18.34■□□□□ 0.53
DNMT3A-208ENST00000466601 C2CD5Q86YS7 1000 aa18.34■□□□□ 0.53
DNMT3A-208ENST00000466601 SYNE4Q8N205 404 aa18.34■□□□□ 0.53
DNMT3A-208ENST00000466601 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
DNMT3A-208ENST00000466601 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
DNMT3A-208ENST00000466601 H0YIN7 160 aa18.33■□□□□ 0.52
DNMT3A-208ENST00000466601 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.52
DNMT3A-208ENST00000466601 GCKRQ14397 625 aa18.33■□□□□ 0.52
DNMT3A-208ENST00000466601 SRCIN1Q9C0H9 1055 aa18.33■□□□□ 0.52
DNMT3A-208ENST00000466601 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
DNMT3A-208ENST00000466601 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
DNMT3A-208ENST00000466601 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
DNMT3A-208ENST00000466601 KCNA3P22001 575 aa18.32■□□□□ 0.52
DNMT3A-208ENST00000466601 JARID2Q92833 1246 aaPredicted RBP18.32■□□□□ 0.52
DNMT3A-208ENST00000466601 ANKRD31Q8N7Z5 1873 aa18.32■□□□□ 0.52
DNMT3A-208ENST00000466601 RIC1Q4ADV7 1423 aa18.32■□□□□ 0.52
DNMT3A-208ENST00000466601 IRS4O14654 1257 aaPredicted RBP18.31■□□□□ 0.52
DNMT3A-208ENST00000466601 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
DNMT3A-208ENST00000466601 ATF7IPQ6VMQ6 1270 aa18.31■□□□□ 0.52
DNMT3A-208ENST00000466601 NLRP3Q96P20 1036 aa18.31■□□□□ 0.52
DNMT3A-208ENST00000466601 KIAA1551Q9HCM1 1747 aa18.3■□□□□ 0.52
DNMT3A-208ENST00000466601 H7C1W4 665 aa18.3■□□□□ 0.52
DNMT3A-208ENST00000466601 SRGNP10124 158 aa18.3■□□□□ 0.52
DNMT3A-208ENST00000466601 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
DNMT3A-208ENST00000466601 CDHR2Q9BYE9 1310 aa18.29■□□□□ 0.52
DNMT3A-208ENST00000466601 TRIM27P14373 513 aa18.29■□□□□ 0.52
DNMT3A-208ENST00000466601 HSP90B1P14625 803 aaKnown RBP18.29■□□□□ 0.52
DNMT3A-208ENST00000466601 C3orf67Q6ZVT6 689 aa18.29■□□□□ 0.52
DNMT3A-208ENST00000466601 ZNF622Q969S3 477 aaKnown RBP eCLIP18.29■□□□□ 0.52
DNMT3A-208ENST00000466601 PIM2Q9P1W9 311 aa18.29■□□□□ 0.52
DNMT3A-208ENST00000466601 WWC3Q9ULE0 1092 aa18.29■□□□□ 0.52
DNMT3A-208ENST00000466601 NPR1P16066 1061 aa18.28■□□□□ 0.52
DNMT3A-208ENST00000466601 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
DNMT3A-208ENST00000466601 CRY2Q49AN0 593 aa18.28■□□□□ 0.52
DNMT3A-208ENST00000466601 STYK1Q6J9G0 422 aa18.28■□□□□ 0.52
DNMT3A-208ENST00000466601 UBE3BQ7Z3V4 1068 aa18.28■□□□□ 0.52
DNMT3A-208ENST00000466601 MASTLQ96GX5 879 aa18.28■□□□□ 0.52
DNMT3A-208ENST00000466601 TNNQ9UQP3 1299 aa18.28■□□□□ 0.52
DNMT3A-208ENST00000466601 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
DNMT3A-208ENST00000466601 ABCC4O15439 1325 aa18.27■□□□□ 0.52
DNMT3A-208ENST00000466601 GRM8O00222 908 aa18.27■□□□□ 0.52
DNMT3A-208ENST00000466601 PDE8AO60658 829 aa18.27■□□□□ 0.52
DNMT3A-208ENST00000466601 CASP7P55210 303 aa18.27■□□□□ 0.52
DNMT3A-208ENST00000466601 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
DNMT3A-208ENST00000466601 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
DNMT3A-208ENST00000466601 C9orf78Q9NZ63 289 aaPredicted RBP18.27■□□□□ 0.52
DNMT3A-208ENST00000466601 RPGRQ92834 1020 aaKnown RBP18.26■□□□□ 0.51
DNMT3A-208ENST00000466601 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
DNMT3A-208ENST00000466601 SF3B3Q15393 1217 aaKnown RBP18.25■□□□□ 0.51
DNMT3A-208ENST00000466601 GPR162Q16538 588 aa18.25■□□□□ 0.51
DNMT3A-208ENST00000466601 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
DNMT3A-208ENST00000466601 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
DNMT3A-208ENST00000466601 TTLL6Q8N841 843 aa18.25■□□□□ 0.51
DNMT3A-208ENST00000466601 BCS1LQ9Y276 419 aa18.25■□□□□ 0.51
DNMT3A-208ENST00000466601 COL11A2P13942 1736 aaPredicted RBP18.25■□□□□ 0.51
DNMT3A-208ENST00000466601 DDX60Q8IY21 1712 aaKnown RBP18.24■□□□□ 0.51
DNMT3A-208ENST00000466601 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
DNMT3A-208ENST00000466601 HOXA10P31260 410 aaPredicted RBP18.24■□□□□ 0.51
DNMT3A-208ENST00000466601 DZIP1LQ8IYY4 767 aaKnown RBP18.24■□□□□ 0.51
DNMT3A-208ENST00000466601 RBM17Q96I25 401 aaKnown RBP18.24■□□□□ 0.51
DNMT3A-208ENST00000466601 UTYO14607 1347 aa18.23■□□□□ 0.51
DNMT3A-208ENST00000466601 DLEC1Q9Y238 1755 aa18.23■□□□□ 0.51
DNMT3A-208ENST00000466601 NBPF7P0C2Y1 421 aaPredicted RBP18.23■□□□□ 0.51
DNMT3A-208ENST00000466601 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
DNMT3A-208ENST00000466601 ALDH1B1P30837 517 aa18.23■□□□□ 0.51
DNMT3A-208ENST00000466601 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
DNMT3A-208ENST00000466601 PLA2G12BQ9BX93 195 aa18.23■□□□□ 0.51
DNMT3A-208ENST00000466601 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
DNMT3A-208ENST00000466601 PLIN1O60240 522 aa18.22■□□□□ 0.51
DNMT3A-208ENST00000466601 CTSWP56202 376 aa18.22■□□□□ 0.51
DNMT3A-208ENST00000466601 DDX46Q7L014 1031 aaKnown RBP18.22■□□□□ 0.51
DNMT3A-208ENST00000466601 TMEM57Q8N5G2 664 aa18.22■□□□□ 0.51
DNMT3A-208ENST00000466601 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.22■□□□□ 0.51
DNMT3A-208ENST00000466601 CRAMP1Q96RY5 1269 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms