RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 RFC5P40937 340 aa9.07□□□□□ -0.96
NCL-208ENST00000466274 RAB15P59190 212 aa9.07□□□□□ -0.96
NCL-208ENST00000466274 PTSQ03393 145 aa9.07□□□□□ -0.96
NCL-208ENST00000466274 DHX9Q08211 1270 aaKnown RBP9.07□□□□□ -0.96
NCL-208ENST00000466274 TMPRSS4Q9NRS4 437 aa9.07□□□□□ -0.96
NCL-208ENST00000466274 CHIC2Q9UKJ5 165 aa9.07□□□□□ -0.96
NCL-208ENST00000466274 TRIM37O94972 964 aa9.06□□□□□ -0.96
NCL-208ENST00000466274 RELBQ01201 579 aa9.06□□□□□ -0.96
NCL-208ENST00000466274 PSME1Q06323 249 aa9.06□□□□□ -0.96
NCL-208ENST00000466274 ADGRL2O95490 1459 aa9.06□□□□□ -0.96
NCL-208ENST00000466274 SPATA31A3Q5VYP0 1347 aa9.05□□□□□ -0.96
NCL-208ENST00000466274 CTSOP43234 321 aaPredicted RBP9.05□□□□□ -0.96
NCL-208ENST00000466274 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
NCL-208ENST00000466274 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.05□□□□□ -0.96
NCL-208ENST00000466274 PXDNQ92626 1479 aa9.04□□□□□ -0.96
NCL-208ENST00000466274 SLC24A1O60721 1099 aa9.04□□□□□ -0.96
NCL-208ENST00000466274 FAM182BQ5T319 152 aa9.04□□□□□ -0.96
NCL-208ENST00000466274 INSM2Q96T92 566 aaPredicted RBP9.04□□□□□ -0.96
NCL-208ENST00000466274 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
NCL-208ENST00000466274 XRN1Q8IZH2 1706 aaKnown RBP9.04□□□□□ -0.96
NCL-208ENST00000466274 DZIP3Q86Y13 1208 aaKnown RBP9.03□□□□□ -0.96
NCL-208ENST00000466274 PNMA1Q8ND90 353 aa9.03□□□□□ -0.96
NCL-208ENST00000466274 HFM1A2PYH4 1435 aa9.03□□□□□ -0.96
NCL-208ENST00000466274 DAPK1P53355 1430 aa9.03□□□□□ -0.96
NCL-208ENST00000466274 FAM83GA6ND36 823 aa9.02□□□□□ -0.97
NCL-208ENST00000466274 NBPF20Q3BBV1 942 aa9.02□□□□□ -0.97
NCL-208ENST00000466274 KRT28Q7Z3Y7 464 aa9.02□□□□□ -0.97
NCL-208ENST00000466274 CCDC155Q8N6L0 562 aa9.02□□□□□ -0.97
NCL-208ENST00000466274 TRIM34Q9BYJ4 488 aa9.02□□□□□ -0.97
NCL-208ENST00000466274 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
NCL-208ENST00000466274 ADGRB2O60241 1585 aa9.02□□□□□ -0.97
NCL-208ENST00000466274 PTPN23Q9H3S7 1636 aa9.02□□□□□ -0.97
NCL-208ENST00000466274 ROBO2Q9HCK4 1378 aa9.01□□□□□ -0.97
NCL-208ENST00000466274 GCC2Q8IWJ2 1684 aa9.01□□□□□ -0.97
NCL-208ENST00000466274 ERVH48-1M5A8F1 160 aa9.01□□□□□ -0.97
NCL-208ENST00000466274 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
NCL-208ENST00000466274 KRT76Q01546 638 aa9.01□□□□□ -0.97
NCL-208ENST00000466274 IL27Q8NEV9 243 aa9.01□□□□□ -0.97
NCL-208ENST00000466274 PCMTD1Q96MG8 357 aaPredicted RBP9.01□□□□□ -0.97
NCL-208ENST00000466274 BTG4Q9NY30 223 aa9.01□□□□□ -0.97
NCL-208ENST00000466274 ANKRD50Q9ULJ7 1429 aa9.01□□□□□ -0.97
NCL-208ENST00000466274 LILRA1O75019 489 aa9□□□□□ -0.97
NCL-208ENST00000466274 PDE3BQ13370 1112 aa9□□□□□ -0.97
NCL-208ENST00000466274 CNTNAP3BQ96NU0 1288 aa9□□□□□ -0.97
NCL-208ENST00000466274 CNTNAP3Q9BZ76 1288 aa9□□□□□ -0.97
NCL-208ENST00000466274 POLMQ9NP87 494 aaPredicted RBP9□□□□□ -0.97
NCL-208ENST00000466274 SPATA31A5Q5VU36 1347 aa9□□□□□ -0.97
NCL-208ENST00000466274 SPATA31A7Q8IWB4 1347 aa9□□□□□ -0.97
NCL-208ENST00000466274 ARHGEF10O15013 1369 aa8.99□□□□□ -0.97
NCL-208ENST00000466274 NEUROD2Q15784 382 aa8.99□□□□□ -0.97
NCL-208ENST00000466274 KDF1Q8NAX2 398 aaPredicted RBP8.99□□□□□ -0.97
NCL-208ENST00000466274 SYT17Q9BSW7 474 aa8.99□□□□□ -0.97
NCL-208ENST00000466274 GOPCQ9HD26 462 aa8.99□□□□□ -0.97
NCL-208ENST00000466274 RGPD1P0DJD0 1748 aa8.99□□□□□ -0.97
NCL-208ENST00000466274 SLC35F4A4IF30 521 aa8.98□□□□□ -0.97
NCL-208ENST00000466274 ESPNB1AK53 854 aa8.98□□□□□ -0.97
NCL-208ENST00000466274 TMEM259Q4ZIN3 620 aa8.98□□□□□ -0.97
NCL-208ENST00000466274 BRWD3Q6RI45 1802 aa8.98□□□□□ -0.97
NCL-208ENST00000466274 ADH1AP07327 375 aa8.97□□□□□ -0.97
NCL-208ENST00000466274 PTGIRP43119 386 aa8.97□□□□□ -0.97
NCL-208ENST00000466274 GPR162Q16538 588 aa8.97□□□□□ -0.97
NCL-208ENST00000466274 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
NCL-208ENST00000466274 VWA5B2Q8N398 1253 aa8.97□□□□□ -0.97
NCL-208ENST00000466274 RNF217Q8TC41 542 aa8.97□□□□□ -0.97
NCL-208ENST00000466274 NANOS1Q8WY41 292 aaKnown RBP8.97□□□□□ -0.97
NCL-208ENST00000466274 COL25A1Q9BXS0 654 aaPredicted RBP8.97□□□□□ -0.97
NCL-208ENST00000466274 FHDC1Q9C0D6 1143 aaPredicted RBP8.97□□□□□ -0.97
NCL-208ENST00000466274 USP32Q8NFA0 1604 aa8.97□□□□□ -0.97
NCL-208ENST00000466274 NALCNQ8IZF0 1738 aa8.97□□□□□ -0.97
NCL-208ENST00000466274 TNS3Q68CZ2 1445 aa8.97□□□□□ -0.97
NCL-208ENST00000466274 ZBTB7AO95365 584 aa8.96□□□□□ -0.98
NCL-208ENST00000466274 CYLDQ9NQC7 956 aa8.96□□□□□ -0.98
NCL-208ENST00000466274 MARF1Q9Y4F3 1742 aaKnown RBP8.96□□□□□ -0.98
NCL-208ENST00000466274 SBNO1A3KN83 1393 aa8.96□□□□□ -0.98
NCL-208ENST00000466274 PRAG1Q86YV5 1406 aa8.96□□□□□ -0.98
NCL-208ENST00000466274 CEP350Q5VT06 3117 aa8.96□□□□□ -0.98
NCL-208ENST00000466274 HSPA6P17066 643 aa8.95□□□□□ -0.98
NCL-208ENST00000466274 ITGA6P23229 1130 aa8.95□□□□□ -0.98
NCL-208ENST00000466274 RNFT1Q5M7Z0 435 aa8.95□□□□□ -0.98
NCL-208ENST00000466274 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
NCL-208ENST00000466274 PCDHB9Q9Y5E1 797 aa8.95□□□□□ -0.98
NCL-208ENST00000466274 CDC14CA4D256 554 aa8.94□□□□□ -0.98
NCL-208ENST00000466274 ZBBXA8MT70 800 aa8.94□□□□□ -0.98
NCL-208ENST00000466274 FBXO45P0C2W1 286 aa8.94□□□□□ -0.98
NCL-208ENST00000466274 NRXN3Q9Y4C0 1643 aa8.94□□□□□ -0.98
NCL-208ENST00000466274 MYO5BQ9ULV0 1848 aa8.94□□□□□ -0.98
NCL-208ENST00000466274 PLSCR1O15162 318 aa8.93□□□□□ -0.98
NCL-208ENST00000466274 SPATA31A1Q5TZJ5 1347 aa8.93□□□□□ -0.98
NCL-208ENST00000466274 NAIPQ13075 1403 aa8.93□□□□□ -0.98
NCL-208ENST00000466274 RRBP1Q9P2E9 1410 aaKnown RBP8.93□□□□□ -0.98
NCL-208ENST00000466274 NWD2Q9ULI1 1742 aa8.93□□□□□ -0.98
NCL-208ENST00000466274 CDC42BPGQ6DT37 1551 aa8.92□□□□□ -0.98
NCL-208ENST00000466274 NUP155O75694 1391 aa8.92□□□□□ -0.98
NCL-208ENST00000466274 SV2AQ7L0J3 742 aa8.92□□□□□ -0.98
NCL-208ENST00000466274 ARXQ96QS3 562 aa8.92□□□□□ -0.98
NCL-208ENST00000466274 MTFR1LQ9H019 292 aa8.92□□□□□ -0.98
NCL-208ENST00000466274 PRDM11Q9NQV5 511 aa8.92□□□□□ -0.98
NCL-208ENST00000466274 STK32BQ9NY57 414 aa8.92□□□□□ -0.98
NCL-208ENST00000466274 NEXMIFQ5QGS0 1516 aa8.91□□□□□ -0.98
NCL-208ENST00000466274 RPGRIP1LQ68CZ1 1315 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms