RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 MTX1Q13505 466 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 CACNA1FO60840 1977 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 MBD3O95983 291 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 GJB2P29033 226 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 FERMT3Q86UX7 667 aa19.63■□□□□ 0.73
SLX4-202ENST00000466154 STX6O43752 255 aa19.62■□□□□ 0.73
SLX4-202ENST00000466154 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.62■□□□□ 0.73
SLX4-202ENST00000466154 CYP27B1O15528 508 aa19.62■□□□□ 0.73
SLX4-202ENST00000466154 LRSAM1Q6UWE0 723 aa19.61■□□□□ 0.73
SLX4-202ENST00000466154 NEUROD6Q96NK8 337 aa19.61■□□□□ 0.73
SLX4-202ENST00000466154 SNRPA1P09661 255 aaKnown RBP19.61■□□□□ 0.73
SLX4-202ENST00000466154 TFCP2Q12800 502 aa19.61■□□□□ 0.73
SLX4-202ENST00000466154 TTC14Q96N46 770 aa19.61■□□□□ 0.73
SLX4-202ENST00000466154 C1orf167Q5SNV9 1468 aa19.61■□□□□ 0.73
SLX4-202ENST00000466154 CCDC171Q6TFL3 1326 aa19.61■□□□□ 0.73
SLX4-202ENST00000466154 CREB3L3Q68CJ9 461 aa19.61■□□□□ 0.73
SLX4-202ENST00000466154 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
SLX4-202ENST00000466154 TMEM94Q12767 1356 aa19.6■□□□□ 0.73
SLX4-202ENST00000466154 METTL22Q9BUU2 404 aaPredicted RBP19.6■□□□□ 0.73
SLX4-202ENST00000466154 PTMAP06454 111 aaKnown RBP19.59■□□□□ 0.73
SLX4-202ENST00000466154 ZSCAN22P10073 491 aaPredicted RBP19.59■□□□□ 0.73
SLX4-202ENST00000466154 CCDC129Q6ZRS4 1044 aa19.59■□□□□ 0.73
SLX4-202ENST00000466154 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
SLX4-202ENST00000466154 FMNL2Q96PY5 1086 aa19.59■□□□□ 0.73
SLX4-202ENST00000466154 TOM1L2Q6ZVM7 507 aa19.59■□□□□ 0.73
SLX4-202ENST00000466154 ZNF589Q86UQ0 364 aaPredicted RBP19.59■□□□□ 0.73
SLX4-202ENST00000466154 PKNOX2Q96KN3 472 aa19.59■□□□□ 0.73
SLX4-202ENST00000466154 STRN4Q9NRL3 753 aa19.59■□□□□ 0.73
SLX4-202ENST00000466154 ZBTB3Q9H5J0 574 aa19.59■□□□□ 0.73
SLX4-202ENST00000466154 FAM173BQ6P4H8 233 aa19.58■□□□□ 0.73
SLX4-202ENST00000466154 DDX46Q7L014 1031 aaKnown RBP19.58■□□□□ 0.73
SLX4-202ENST00000466154 SYAP1Q96A49 352 aaPredicted RBP19.58■□□□□ 0.73
SLX4-202ENST00000466154 ME3Q16798 604 aa19.58■□□□□ 0.72
SLX4-202ENST00000466154 NAP1L2Q9ULW6 460 aaPredicted RBP19.58■□□□□ 0.72
SLX4-202ENST00000466154 NCAPD2Q15021 1401 aa19.58■□□□□ 0.72
SLX4-202ENST00000466154 FOSBP53539 338 aa19.57■□□□□ 0.72
SLX4-202ENST00000466154 DNM1Q05193 864 aaKnown RBP19.57■□□□□ 0.72
SLX4-202ENST00000466154 SEC62Q99442 399 aaKnown RBP19.57■□□□□ 0.72
SLX4-202ENST00000466154 TSPY26PQ9H489 355 aa19.57■□□□□ 0.72
SLX4-202ENST00000466154 RPAP1Q9BWH6 1393 aaPredicted RBP19.57■□□□□ 0.72
SLX4-202ENST00000466154 KDM6AO15550 1401 aaPredicted RBP19.57■□□□□ 0.72
SLX4-202ENST00000466154 PPFIA3O75145 1194 aa19.57■□□□□ 0.72
SLX4-202ENST00000466154 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
SLX4-202ENST00000466154 LMBR1LQ6UX01 489 aa19.57■□□□□ 0.72
SLX4-202ENST00000466154 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
SLX4-202ENST00000466154 FGD1P98174 961 aa19.57■□□□□ 0.72
SLX4-202ENST00000466154 PRDM11Q9NQV5 511 aa19.57■□□□□ 0.72
SLX4-202ENST00000466154 SLC27A2O14975 620 aa19.56■□□□□ 0.72
SLX4-202ENST00000466154 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
SLX4-202ENST00000466154 DBNDD2Q9BQY9 259 aa19.56■□□□□ 0.72
SLX4-202ENST00000466154 MEGF6O75095 1541 aa19.56■□□□□ 0.72
SLX4-202ENST00000466154 BLOC1S2Q6QNY1 142 aa19.56■□□□□ 0.72
SLX4-202ENST00000466154 LRRC2Q9BYS8 371 aa19.56■□□□□ 0.72
SLX4-202ENST00000466154 DBNLQ9UJU6 430 aaKnown RBP19.56■□□□□ 0.72
SLX4-202ENST00000466154 TPCN1Q9ULQ1 816 aa19.56■□□□□ 0.72
SLX4-202ENST00000466154 KDM3BQ7LBC6 1761 aa19.56■□□□□ 0.72
SLX4-202ENST00000466154 USP42Q9H9J4 1324 aaKnown RBP19.55■□□□□ 0.72
SLX4-202ENST00000466154 F13A1P00488 732 aa19.55■□□□□ 0.72
SLX4-202ENST00000466154 A1BGP04217 495 aa19.55■□□□□ 0.72
SLX4-202ENST00000466154 PPP1R9BQ96SB3 815 aa19.55■□□□□ 0.72
SLX4-202ENST00000466154 HEG1Q9ULI3 1381 aa19.55■□□□□ 0.72
SLX4-202ENST00000466154 HSP90B1P14625 803 aaKnown RBP19.55■□□□□ 0.72
SLX4-202ENST00000466154 NECTIN1Q15223 517 aa19.55■□□□□ 0.72
SLX4-202ENST00000466154 LARP1BQ659C4 914 aaKnown RBP19.55■□□□□ 0.72
SLX4-202ENST00000466154 VPS53Q5VIR6 699 aa19.54■□□□□ 0.72
SLX4-202ENST00000466154 TTLL7Q6ZT98 887 aa19.54■□□□□ 0.72
SLX4-202ENST00000466154 ZSCAN30Q86W11 494 aa19.54■□□□□ 0.72
SLX4-202ENST00000466154 TAOK2Q9UL54 1235 aa19.54■□□□□ 0.72
SLX4-202ENST00000466154 RGPD5Q99666 1765 aa19.54■□□□□ 0.72
SLX4-202ENST00000466154 RNF20Q5VTR2 975 aa19.53■□□□□ 0.72
SLX4-202ENST00000466154 ZSWIM6Q9HCJ5 1215 aa19.53■□□□□ 0.72
SLX4-202ENST00000466154 PTPN12Q05209 780 aaKnown RBP19.53■□□□□ 0.72
SLX4-202ENST00000466154 TNNI3KQ59H18 835 aa19.53■□□□□ 0.72
SLX4-202ENST00000466154 FPGT-TNNI3KV9GXZ4 949 aa19.53■□□□□ 0.72
SLX4-202ENST00000466154 HIP1O00291 1037 aa19.53■□□□□ 0.72
SLX4-202ENST00000466154 TIMM10P62072 90 aa19.53■□□□□ 0.72
SLX4-202ENST00000466154 ZNF594Q96JF6 807 aaPredicted RBP19.53■□□□□ 0.72
SLX4-202ENST00000466154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.52■□□□□ 0.72
SLX4-202ENST00000466154 A0A0G2JS52 829 aa19.52■□□□□ 0.72
SLX4-202ENST00000466154 MAP4K1Q92918 833 aa19.52■□□□□ 0.72
SLX4-202ENST00000466154 LMO7Q8WWI1 1683 aa19.52■□□□□ 0.72
SLX4-202ENST00000466154 PSMA5P28066 241 aa19.51■□□□□ 0.71
SLX4-202ENST00000466154 GIMAP6Q6P9H5 292 aa19.51■□□□□ 0.71
SLX4-202ENST00000466154 GOLIM4O00461 696 aa19.51■□□□□ 0.71
SLX4-202ENST00000466154 EPB41L2O43491 1005 aaKnown RBP19.51■□□□□ 0.71
SLX4-202ENST00000466154 HCLS1P14317 486 aaPredicted RBP19.51■□□□□ 0.71
SLX4-202ENST00000466154 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
SLX4-202ENST00000466154 TFIP11Q9UBB9 837 aaKnown RBP19.51■□□□□ 0.71
SLX4-202ENST00000466154 ATP6V1DQ9Y5K8 247 aa19.51■□□□□ 0.71
SLX4-202ENST00000466154 PHF14O94880 888 aa19.5■□□□□ 0.71
SLX4-202ENST00000466154 SLIT3O75094 1523 aa19.5■□□□□ 0.71
SLX4-202ENST00000466154 TUBGCP6Q96RT7 1819 aa19.5■□□□□ 0.71
SLX4-202ENST00000466154 UTYO14607 1347 aa19.5■□□□□ 0.71
SLX4-202ENST00000466154 ST3GAL1Q11201 340 aa19.49■□□□□ 0.71
SLX4-202ENST00000466154 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
SLX4-202ENST00000466154 CADPS2Q86UW7 1296 aa19.49■□□□□ 0.71
SLX4-202ENST00000466154 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
SLX4-202ENST00000466154 MTMR6Q9Y217 621 aa19.49■□□□□ 0.71
SLX4-202ENST00000466154 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
SLX4-202ENST00000466154 USP25Q9UHP3 1055 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms