RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 TMEM131LA2VDJ0 1609 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 POLR3AO14802 1390 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-203ENST00000466045 RIMS2Q9UQ26 1411 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 TMCO5BA8MYB1 307 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 CAND2O75155 1236 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 CHMLP26374 656 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 NEDD9Q14511 834 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 CCDC183Q5T5S1 534 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 WWC2Q6AWC2 1192 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 TMCO3Q6UWJ1 677 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 DNAJC14Q6Y2X3 702 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-203ENST00000466045 RINLQ6ZS11 566 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 GIMAP7Q8NHV1 300 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 FUCA2Q9BTY2 467 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 ADAM21Q9UKJ8 722 aa11.11□□□□□ -0.63
CDHR3-203ENST00000466045 FILIP1Q7Z7B0 1213 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 ZNF483Q8TF39 744 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-203ENST00000466045 ZNF526Q8TF50 670 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-203ENST00000466045 SUDS3Q9H7L9 328 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-203ENST00000466045 ARHGEF28Q8N1W1 1705 aaKnown RBP11.1□□□□□ -0.63
CDHR3-203ENST00000466045 AP5Z1O43299 807 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 KINO60870 393 aaKnown RBP11.1□□□□□ -0.63
CDHR3-203ENST00000466045 MAGEA8P43361 318 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 CD151P48509 253 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 MNAT1P51948 309 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 EIF5P55010 431 aaKnown RBP11.1□□□□□ -0.63
CDHR3-203ENST00000466045 BMP2KLQ5H9B9 411 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-203ENST00000466045 IFT57Q9NWB7 429 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 ZFYVE9O95405 1425 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 NEXMIFQ5QGS0 1516 aa11.1□□□□□ -0.63
CDHR3-203ENST00000466045 NEBLO76041 1014 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 MYBL2P10244 700 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 HCLS1P14317 486 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 PTGS1P23219 599 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 DDR1Q08345 913 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 SLC5A9Q2M3M2 681 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 TMTC2Q8N394 836 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 TRIM6Q9C030 488 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 IRAK4Q9NWZ3 460 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 MCM8Q9UJA3 840 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 SMC3Q9UQE7 1217 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 STRCQ7RTU9 1775 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 FAM163BP0C2L3 166 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 MRPL12P52815 198 aaKnown RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 PDCD2Q16342 344 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 TPD52L1Q16890 204 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 GBP6Q6ZN66 633 aa11.09□□□□□ -0.63
CDHR3-203ENST00000466045 UTP14AQ9BVJ6 771 aaKnown RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 SRRTQ9BXP5 876 aaKnown RBP11.09□□□□□ -0.63
CDHR3-203ENST00000466045 MED14O60244 1454 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 RTN2O75298 545 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 HNRNPH1P31943 449 aaKnown RBP11.08□□□□□ -0.64
CDHR3-203ENST00000466045 LMAN1P49257 510 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 SMC1AQ14683 1233 aaKnown RBP11.08□□□□□ -0.64
CDHR3-203ENST00000466045 ANKRD45Q5TZF3 282 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 TMEM87AQ8NBN3 555 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
CDHR3-203ENST00000466045 PPFIA2O75334 1257 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 CCDC93Q567U6 631 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 KCNV1Q6PIU1 500 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 PDRG1Q9NUG6 133 aa11.08□□□□□ -0.64
CDHR3-203ENST00000466045 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDHR3-203ENST00000466045 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
CDHR3-203ENST00000466045 MX1P20591 662 aa11.07□□□□□ -0.64
CDHR3-203ENST00000466045 ZSCAN25Q6NSZ9 544 aa11.07□□□□□ -0.64
CDHR3-203ENST00000466045 MSL3Q8N5Y2 521 aaKnown RBP11.07□□□□□ -0.64
CDHR3-203ENST00000466045 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
CDHR3-203ENST00000466045 KDM4CQ9H3R0 1056 aa11.07□□□□□ -0.64
CDHR3-203ENST00000466045 APAF1O14727 1248 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 BRD1O95696 1058 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 TBC1D8O95759 1140 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 GPTP24298 496 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 RPS6KA3P51812 740 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 PTPN14Q15678 1187 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 CCDC27Q2M243 656 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 TTLL5Q6EMB2 1281 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 KCNB2Q92953 911 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 SPATS2LQ9NUQ6 558 aaKnown RBP11.06□□□□□ -0.64
CDHR3-203ENST00000466045 PLEKHG1Q9ULL1 1385 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 NEMFO60524 1076 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 ERCC6LQ2NKX8 1250 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 WDR63Q8IWG1 891 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 DRAXINQ8NBI3 349 aaPredicted RBP11.06□□□□□ -0.64
CDHR3-203ENST00000466045 ARMC2Q8NEN0 867 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 KAT2BQ92831 832 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 CLIP2Q9UDT6 1046 aa11.06□□□□□ -0.64
CDHR3-203ENST00000466045 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
CDHR3-203ENST00000466045 LRRC31Q6UY01 552 aa11.05□□□□□ -0.64
CDHR3-203ENST00000466045 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
CDHR3-203ENST00000466045 CPSF2Q9P2I0 782 aaKnown RBP11.05□□□□□ -0.64
CDHR3-203ENST00000466045 TUBB4AP04350 444 aa11.05□□□□□ -0.64
CDHR3-203ENST00000466045 RBBP5Q15291 538 aaKnown RBP11.05□□□□□ -0.64
CDHR3-203ENST00000466045 TBC1D25Q3MII6 688 aa11.05□□□□□ -0.64
CDHR3-203ENST00000466045 ARMCX6Q7L4S7 300 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms