RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 RNF217Q8TC41 542 aa10.16□□□□□ -0.78
SPTA1-203ENST00000465741 DNMT3AQ9Y6K1 912 aaPredicted RBP10.16□□□□□ -0.78
SPTA1-203ENST00000465741 TTLL8A6PVC2 850 aa10.15□□□□□ -0.78
SPTA1-203ENST00000465741 PLA2G4AP47712 749 aa10.15□□□□□ -0.78
SPTA1-203ENST00000465741 C4orf17Q53FE4 359 aa10.15□□□□□ -0.78
SPTA1-203ENST00000465741 MYO19Q96H55 970 aa10.15□□□□□ -0.78
SPTA1-203ENST00000465741 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
SPTA1-203ENST00000465741 CLASP1Q7Z460 1538 aa10.15□□□□□ -0.78
SPTA1-203ENST00000465741 CASKIN1Q8WXD9 1431 aa10.15□□□□□ -0.79
SPTA1-203ENST00000465741 RTN1Q16799 776 aa10.14□□□□□ -0.79
SPTA1-203ENST00000465741 WDR44Q5JSH3 913 aa10.14□□□□□ -0.79
SPTA1-203ENST00000465741 C1orf53Q5VUE5 145 aa10.14□□□□□ -0.79
SPTA1-203ENST00000465741 ALDH16A1Q8IZ83 802 aa10.14□□□□□ -0.79
SPTA1-203ENST00000465741 QTRT2Q9H974 415 aaKnown RBP10.14□□□□□ -0.79
SPTA1-203ENST00000465741 ANO2Q9NQ90 1003 aa10.14□□□□□ -0.79
SPTA1-203ENST00000465741 PARP3Q9Y6F1 533 aa10.14□□□□□ -0.79
SPTA1-203ENST00000465741 FAM13AO94988 1023 aa10.13□□□□□ -0.79
SPTA1-203ENST00000465741 PHACTR1Q9C0D0 580 aa10.13□□□□□ -0.79
SPTA1-203ENST00000465741 ZDHHC3Q9NYG2 299 aa10.13□□□□□ -0.79
SPTA1-203ENST00000465741 HCN4Q9Y3Q4 1203 aa10.13□□□□□ -0.79
SPTA1-203ENST00000465741 SAMD9Q5K651 1589 aa10.13□□□□□ -0.79
SPTA1-203ENST00000465741 TATP17735 454 aaPredicted RBP10.12□□□□□ -0.79
SPTA1-203ENST00000465741 HIF1AQ16665 826 aa10.12□□□□□ -0.79
SPTA1-203ENST00000465741 COX20Q5RI15 118 aa10.12□□□□□ -0.79
SPTA1-203ENST00000465741 SH3PXD2AQ5TCZ1 1133 aa10.12□□□□□ -0.79
SPTA1-203ENST00000465741 NBPF10Q6P3W6 841 aaKnown RBP10.12□□□□□ -0.79
SPTA1-203ENST00000465741 PRICKLE2Q7Z3G6 844 aa10.12□□□□□ -0.79
SPTA1-203ENST00000465741 ABTB2Q8N961 1025 aa10.12□□□□□ -0.79
SPTA1-203ENST00000465741 CTTNBP2Q8WZ74 1663 aa10.12□□□□□ -0.79
SPTA1-203ENST00000465741 NPR3P17342 541 aa10.11□□□□□ -0.79
SPTA1-203ENST00000465741 POU4F2Q12837 409 aa10.11□□□□□ -0.79
SPTA1-203ENST00000465741 AIDAQ96BJ3 306 aa10.11□□□□□ -0.79
SPTA1-203ENST00000465741 SAP130Q9H0E3 1048 aa10.11□□□□□ -0.79
SPTA1-203ENST00000465741 STIM2Q9P246 746 aa10.11□□□□□ -0.79
SPTA1-203ENST00000465741 GPC6Q9Y625 555 aaPredicted RBP10.11□□□□□ -0.79
SPTA1-203ENST00000465741 BRD2P25440 801 aaKnown RBP10.1□□□□□ -0.79
SPTA1-203ENST00000465741 PHKA2P46019 1235 aa10.1□□□□□ -0.79
SPTA1-203ENST00000465741 RASSF7Q02833 373 aa10.1□□□□□ -0.79
SPTA1-203ENST00000465741 MTMR3Q13615 1198 aa10.1□□□□□ -0.79
SPTA1-203ENST00000465741 ALKBH2Q6NS38 261 aa10.1□□□□□ -0.79
SPTA1-203ENST00000465741 CNTNAP3BQ96NU0 1288 aa10.1□□□□□ -0.79
SPTA1-203ENST00000465741 CNTNAP3Q9BZ76 1288 aa10.1□□□□□ -0.79
SPTA1-203ENST00000465741 CDK11AQ9UQ88 783 aaPredicted RBP10.1□□□□□ -0.79
SPTA1-203ENST00000465741 KIAA0556O60303 1618 aa10.1□□□□□ -0.79
SPTA1-203ENST00000465741 PLB1Q6P1J6 1458 aa10.1□□□□□ -0.79
SPTA1-203ENST00000465741 ERCC6L2Q5T890 1561 aa10.09□□□□□ -0.79
SPTA1-203ENST00000465741 TXLNAP40222 546 aa10.09□□□□□ -0.79
SPTA1-203ENST00000465741 C11orf91Q3C1V1 193 aa10.09□□□□□ -0.79
SPTA1-203ENST00000465741 RHPN1Q8TCX5 695 aa10.09□□□□□ -0.79
SPTA1-203ENST00000465741 PCGF6Q9BYE7 350 aa10.09□□□□□ -0.79
SPTA1-203ENST00000465741 ADAMTS8Q9UP79 889 aa10.09□□□□□ -0.79
SPTA1-203ENST00000465741 UACAQ9BZF9 1416 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 A0A1B0GTH6 734 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 ERCC3P19447 782 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 MPSTP25325 297 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 MARSP56192 900 aaKnown RBP10.08□□□□□ -0.8
SPTA1-203ENST00000465741 DGKZQ13574 1117 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.08□□□□□ -0.84e-7■□□□□ 10.1
SPTA1-203ENST00000465741 TMEM151AQ8N4L1 468 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 TIMMDC1Q9NPL8 285 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 LRFN2Q9ULH4 789 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
SPTA1-203ENST00000465741 FIGNL2A6NMB9 653 aa10.07□□□□□ -0.8
SPTA1-203ENST00000465741 TNFRSF10BO14763 440 aa10.07□□□□□ -0.8
SPTA1-203ENST00000465741 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
SPTA1-203ENST00000465741 RNFT1Q5M7Z0 435 aa10.07□□□□□ -0.8
SPTA1-203ENST00000465741 DCTN4Q9UJW0 460 aa10.07□□□□□ -0.8
SPTA1-203ENST00000465741 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
SPTA1-203ENST00000465741 GDF11O95390 407 aa10.06□□□□□ -0.8
SPTA1-203ENST00000465741 PTSQ03393 145 aa10.06□□□□□ -0.8
SPTA1-203ENST00000465741 SHROOM2Q13796 1616 aa10.05□□□□□ -0.8
SPTA1-203ENST00000465741 RHOQP17081 205 aa10.05□□□□□ -0.8
SPTA1-203ENST00000465741 ARHGAP4P98171 946 aa10.05□□□□□ -0.8
SPTA1-203ENST00000465741 AAMPQ13685 434 aa10.05□□□□□ -0.8
SPTA1-203ENST00000465741 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
SPTA1-203ENST00000465741 BICDL1Q6ZP65 573 aa10.05□□□□□ -0.8
SPTA1-203ENST00000465741 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
SPTA1-203ENST00000465741 COL25A1Q9BXS0 654 aaPredicted RBP10.05□□□□□ -0.8
SPTA1-203ENST00000465741 NEUROD4Q9HD90 331 aa10.05□□□□□ -0.8
SPTA1-203ENST00000465741 ANKIB1Q9P2G1 1089 aa10.05□□□□□ -0.8
SPTA1-203ENST00000465741 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
SPTA1-203ENST00000465741 NDUFB5O43674 189 aa10.04□□□□□ -0.8
SPTA1-203ENST00000465741 MAPK1P28482 360 aa10.04□□□□□ -0.8
SPTA1-203ENST00000465741 EIF1AXP47813 144 aaKnown RBP10.04□□□□□ -0.8
SPTA1-203ENST00000465741 WHAMMQ8TF30 809 aa10.04□□□□□ -0.8
SPTA1-203ENST00000465741 IFT43Q96FT9 208 aa10.04□□□□□ -0.8
SPTA1-203ENST00000465741 KLK14Q9P0G3 267 aa10.04□□□□□ -0.8
SPTA1-203ENST00000465741 ATP10BO94823 1461 aa10.04□□□□□ -0.8
SPTA1-203ENST00000465741 EPRSP07814 1512 aaKnown RBP10.03□□□□□ -0.8
SPTA1-203ENST00000465741 PCF11O94913 1555 aaKnown RBP10.03□□□□□ -0.8
SPTA1-203ENST00000465741 ECM1Q16610 540 aa10.03□□□□□ -0.8
SPTA1-203ENST00000465741 NANOS1Q8WY41 292 aaKnown RBP10.03□□□□□ -0.8
SPTA1-203ENST00000465741 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
SPTA1-203ENST00000465741 BRPF3Q9ULD4 1205 aa10.03□□□□□ -0.8
SPTA1-203ENST00000465741 DYRK1BQ9Y463 629 aa10.03□□□□□ -0.8
SPTA1-203ENST00000465741 LRRC9Q6ZRR7 1453 aa10.03□□□□□ -0.8
SPTA1-203ENST00000465741 MAP3K1Q13233 1512 aa10.02□□□□□ -0.8
SPTA1-203ENST00000465741 ATP4AP20648 1035 aa10.02□□□□□ -0.81
SPTA1-203ENST00000465741 MSX1P28360 303 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms