RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 SORBS3O60504 671 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 PSMD2Q13200 908 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 TREML1Q86YW5 311 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 PKD2L1Q9P0L9 805 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 VTI1BQ9UEU0 232 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 USP20Q9Y2K6 914 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 WDR4P57081 412 aaKnown RBP6.92□□□□□ -1.3
CDK13-203ENST00000465643 C8orf34Q49A92 452 aa6.92□□□□□ -1.3
CDK13-203ENST00000465643 ZNF697Q5TEC3 545 aa6.92□□□□□ -1.3
CDK13-203ENST00000465643 NT5DC4Q86YG4 428 aa6.92□□□□□ -1.3
CDK13-203ENST00000465643 NBPF15Q8N660 670 aa6.92□□□□□ -1.3
CDK13-203ENST00000465643 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
CDK13-203ENST00000465643 TMEM214Q6NUQ4 689 aaKnown RBP6.91□□□□□ -1.3
CDK13-203ENST00000465643 DRC1Q96MC2 740 aa6.91□□□□□ -1.3
CDK13-203ENST00000465643 PLA2G4AP47712 749 aa6.91□□□□□ -1.3
CDK13-203ENST00000465643 NIFKQ9BYG3 293 aaKnown RBP6.91□□□□□ -1.3
CDK13-203ENST00000465643 TIMP2P16035 220 aa6.9□□□□□ -1.3
CDK13-203ENST00000465643 FANCCQ00597 558 aa6.9□□□□□ -1.3
CDK13-203ENST00000465643 ATP2B2Q01814 1243 aa6.9□□□□□ -1.3
CDK13-203ENST00000465643 CLASP1Q7Z460 1538 aa6.9□□□□□ -1.3
CDK13-203ENST00000465643 KIAA0586Q9BVV6 1533 aa6.9□□□□□ -1.3
CDK13-203ENST00000465643 PHKA2P46019 1235 aa6.9□□□□□ -1.31
CDK13-203ENST00000465643 ZNF280CQ8ND82 737 aa6.9□□□□□ -1.31
CDK13-203ENST00000465643 C7orf43Q8WVR3 580 aa6.9□□□□□ -1.31
CDK13-203ENST00000465643 PIK3R5Q8WYR1 880 aa6.9□□□□□ -1.31
CDK13-203ENST00000465643 BCL11AQ9H165 835 aa6.9□□□□□ -1.31
CDK13-203ENST00000465643 C4orf17Q53FE4 359 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 RHBDD1Q8TEB9 315 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 AIDAQ96BJ3 306 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 HSH2DQ96JZ2 352 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 CTTNBP2Q8WZ74 1663 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 IQGAP2Q13576 1575 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 EIF1AYO14602 144 aaKnown RBP6.89□□□□□ -1.31
CDK13-203ENST00000465643 OPLAHO14841 1288 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 CTSHP09668 335 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 PI16Q6UXB8 463 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 CSRNP1Q96S65 589 aa6.89□□□□□ -1.31
CDK13-203ENST00000465643 INSM2Q96T92 566 aaPredicted RBP6.89□□□□□ -1.31
CDK13-203ENST00000465643 USPL1Q5W0Q7 1092 aa6.88□□□□□ -1.31
CDK13-203ENST00000465643 TNFRSF10AO00220 468 aa6.88□□□□□ -1.31
CDK13-203ENST00000465643 MICAL2O94851 1124 aa6.88□□□□□ -1.31
CDK13-203ENST00000465643 USP5P45974 858 aa6.88□□□□□ -1.31
CDK13-203ENST00000465643 SLC27A3Q5K4L6 730 aa6.88□□□□□ -1.31
CDK13-203ENST00000465643 SNIP1Q8TAD8 396 aaKnown RBP6.88□□□□□ -1.31
CDK13-203ENST00000465643 GRIP2Q9C0E4 1043 aa6.88□□□□□ -1.31
CDK13-203ENST00000465643 TTBK1Q5TCY1 1321 aaPredicted RBP6.88□□□□□ -1.31
CDK13-203ENST00000465643 GNA15P30679 374 aa6.87□□□□□ -1.31
CDK13-203ENST00000465643 IRS1P35568 1242 aa6.87□□□□□ -1.31
CDK13-203ENST00000465643 TNNI2P48788 182 aa6.87□□□□□ -1.31
CDK13-203ENST00000465643 ALG1LQ6GMV1 187 aa6.87□□□□□ -1.31
CDK13-203ENST00000465643 ZNF598Q86UK7 904 aaKnown RBP6.87□□□□□ -1.31
CDK13-203ENST00000465643 SPNS2Q8IVW8 549 aa6.87□□□□□ -1.31
CDK13-203ENST00000465643 FOXD3Q9UJU5 478 aaPredicted RBP6.87□□□□□ -1.31
CDK13-203ENST00000465643 PRG4Q92954 1404 aaPredicted RBP6.87□□□□□ -1.31
CDK13-203ENST00000465643 RHPN1Q8TCX5 695 aa6.87□□□□□ -1.31
CDK13-203ENST00000465643 CTSOP43234 321 aaPredicted RBP6.86□□□□□ -1.31
CDK13-203ENST00000465643 C1orf53Q5VUE5 145 aa6.86□□□□□ -1.31
CDK13-203ENST00000465643 RNF34Q969K3 372 aa6.86□□□□□ -1.31
CDK13-203ENST00000465643 ACBD3Q9H3P7 528 aa6.86□□□□□ -1.31
CDK13-203ENST00000465643 TNIKQ9UKE5 1360 aa6.86□□□□□ -1.31
CDK13-203ENST00000465643 TTC24A2A3L6 582 aaPredicted RBP6.86□□□□□ -1.31
CDK13-203ENST00000465643 MEIOBQ8N635 442 aa6.86□□□□□ -1.31
CDK13-203ENST00000465643 SUSD3Q96L08 255 aa6.86□□□□□ -1.31
CDK13-203ENST00000465643 DMGDHQ9UI17 866 aaKnown RBP6.86□□□□□ -1.31
CDK13-203ENST00000465643 CARMIL2Q6F5E8 1435 aa6.85□□□□□ -1.31
CDK13-203ENST00000465643 ZNF76P36508 570 aa6.85□□□□□ -1.31
CDK13-203ENST00000465643 TRIP4Q15650 581 aaPredicted RBP6.85□□□□□ -1.31
CDK13-203ENST00000465643 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDK13-203ENST00000465643 EPS8L3Q8TE67 593 aaKnown RBP6.85□□□□□ -1.31
CDK13-203ENST00000465643 HPS1Q92902 700 aa6.85□□□□□ -1.31
CDK13-203ENST00000465643 TINF2Q9BSI4 451 aa6.85□□□□□ -1.31
CDK13-203ENST00000465643 SHROOM2Q13796 1616 aa6.85□□□□□ -1.31
CDK13-203ENST00000465643 SMPD1P17405 629 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 IDH3AP50213 366 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 ZNF394Q53GI3 561 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 GNASQ5JWF2 1037 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 PCDHGB7Q9Y5F8 929 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 AK5Q9Y6K8 562 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 ARHGEF11O15085 1522 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 UGGT2Q9NYU1 1516 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 TGFBR3LH3BV60 316 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 GTF2E1P29083 439 aaPredicted RBP6.84□□□□□ -1.31
CDK13-203ENST00000465643 FGD1P98174 961 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 FAM177A1Q8N128 213 aaPredicted RBP6.84□□□□□ -1.31
CDK13-203ENST00000465643 OSBPL7Q9BZF2 842 aa6.84□□□□□ -1.31
CDK13-203ENST00000465643 POLMQ9NP87 494 aaPredicted RBP6.84□□□□□ -1.31
CDK13-203ENST00000465643 ERCC6L2Q5T890 1561 aa6.84□□□□□ -1.32
CDK13-203ENST00000465643 GDF9O60383 454 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 PCSK2P16519 638 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 POU4F2Q12837 409 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 PRICKLE2Q7Z3G6 844 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 CAPN10Q9HC96 672 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 RIMBP3CA6NJZ7 1639 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 RIMBP3BA6NNM3 1639 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 RIMBP3Q9UFD9 1639 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 TNFRSF21O75509 655 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 RNF144AP50876 292 aaPredicted RBP6.83□□□□□ -1.32
CDK13-203ENST00000465643 CYP4X1Q8N118 509 aa6.83□□□□□ -1.32
CDK13-203ENST00000465643 METTL5Q9NRN9 209 aaKnown RBP6.83□□□□□ -1.32
CDK13-203ENST00000465643 CPNE3O75131 537 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms