RNA–Protein interactions for RNA: ENST00000465582.5

SSBP1-205, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSBP1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-205ENST00000465582 TTC5Q8N0Z6 440 aa8.45□□□□□ -1.06
SSBP1-205ENST00000465582 LINC00116Q8NCU8 138 aa8.45□□□□□ -1.06
SSBP1-205ENST00000465582 MIS18AQ9NYP9 233 aa8.45□□□□□ -1.06
SSBP1-205ENST00000465582 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-205ENST00000465582 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
SSBP1-205ENST00000465582 R3HDM1Q15032 1099 aaKnown RBP8.44□□□□□ -1.06
SSBP1-205ENST00000465582 ZNF790Q6PG37 636 aa8.44□□□□□ -1.06
SSBP1-205ENST00000465582 ZNF496Q96IT1 587 aaPredicted RBP8.44□□□□□ -1.06
SSBP1-205ENST00000465582 RBM27Q9P2N5 1060 aaKnown RBP8.44□□□□□ -1.06
SSBP1-205ENST00000465582 HEG1Q9ULI3 1381 aa8.44□□□□□ -1.06
SSBP1-205ENST00000465582 SCN7AQ01118 1682 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 PRAMEF22A3QJZ6 481 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 RIMBP2O15034 1052 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 MS4A1P11836 297 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
SSBP1-205ENST00000465582 TAF7Q15545 349 aaPredicted RBP8.43□□□□□ -1.06
SSBP1-205ENST00000465582 SMIM5Q71RC9 77 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 AMIGO3Q86WK7 504 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 DNAJC10Q8IXB1 793 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 STK32BQ9NY57 414 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 TSPYL4Q9UJ04 414 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
SSBP1-205ENST00000465582 BCORQ6W2J9 1755 aa8.43□□□□□ -1.06
SSBP1-205ENST00000465582 A6NJR5 290 aa8.42□□□□□ -1.06
SSBP1-205ENST00000465582 POTEIP0CG38 1075 aa8.42□□□□□ -1.06
SSBP1-205ENST00000465582 SLC15A2Q16348 729 aa8.42□□□□□ -1.06
SSBP1-205ENST00000465582 IFFO2Q5TF58 517 aa8.42□□□□□ -1.06
SSBP1-205ENST00000465582 FMNL2Q96PY5 1086 aa8.42□□□□□ -1.06
SSBP1-205ENST00000465582 PNPLA7Q6ZV29 1317 aa8.42□□□□□ -1.06
SSBP1-205ENST00000465582 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
SSBP1-205ENST00000465582 CRKLP46109 303 aaKnown RBP8.41□□□□□ -1.06
SSBP1-205ENST00000465582 DOK7Q18PE1 504 aa8.41□□□□□ -1.06
SSBP1-205ENST00000465582 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
SSBP1-205ENST00000465582 KRT24Q2M2I5 525 aa8.41□□□□□ -1.06
SSBP1-205ENST00000465582 NBPF14Q5TI25 921 aa8.41□□□□□ -1.06
SSBP1-205ENST00000465582 WWC1Q8IX03 1113 aa8.41□□□□□ -1.06
SSBP1-205ENST00000465582 ZDHHC16Q969W1 377 aa8.41□□□□□ -1.06
SSBP1-205ENST00000465582 PDGFDQ9GZP0 370 aaPredicted RBP8.41□□□□□ -1.06
SSBP1-205ENST00000465582 MBIPQ9NS73 344 aa8.41□□□□□ -1.06
SSBP1-205ENST00000465582 YY1P25490 414 aa8.4□□□□□ -1.06
SSBP1-205ENST00000465582 PIP4K2AP48426 406 aaPredicted RBP8.4□□□□□ -1.06
SSBP1-205ENST00000465582 FOSBP53539 338 aa8.4□□□□□ -1.06
SSBP1-205ENST00000465582 EIF4A1P60842 406 aaKnown RBP8.4□□□□□ -1.06
SSBP1-205ENST00000465582 C6orf132Q5T0Z8 1188 aa8.4□□□□□ -1.06
SSBP1-205ENST00000465582 RBM46Q8TBY0 533 aaKnown RBP8.4□□□□□ -1.06
SSBP1-205ENST00000465582 TSR2Q969E8 191 aaKnown RBP8.4□□□□□ -1.06
SSBP1-205ENST00000465582 BEGAINQ9BUH8 593 aa8.4□□□□□ -1.06
SSBP1-205ENST00000465582 CDHR5Q9HBB8 845 aa8.4□□□□□ -1.06
SSBP1-205ENST00000465582 IFT57Q9NWB7 429 aa8.4□□□□□ -1.06
SSBP1-205ENST00000465582 ZBTB1Q9Y2K1 713 aa8.4□□□□□ -1.06
SSBP1-205ENST00000465582 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.07
SSBP1-205ENST00000465582 COL15A1P39059 1388 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 ZNF521Q96K83 1311 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 POTEFA5A3E0 1075 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 CHL1O00533 1208 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 RAD21O60216 631 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 ZNF853P0CG23 659 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 CYP19A1P11511 503 aaPredicted RBP8.39□□□□□ -1.07
SSBP1-205ENST00000465582 METTL3Q86U44 580 aaKnown RBP8.39□□□□□ -1.07
SSBP1-205ENST00000465582 ZSWIM6Q9HCJ5 1215 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 TFCP2L1Q9NZI6 479 aa8.39□□□□□ -1.07
SSBP1-205ENST00000465582 SOS1Q07889 1333 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-205ENST00000465582 FANCIQ9NVI1 1328 aa8.38□□□□□ -1.07
SSBP1-205ENST00000465582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
SSBP1-205ENST00000465582 SNRPA1P09661 255 aaKnown RBP8.38□□□□□ -1.07
SSBP1-205ENST00000465582 GNAI1P63096 354 aa8.38□□□□□ -1.07
SSBP1-205ENST00000465582 CALD1Q05682 793 aaKnown RBP8.38□□□□□ -1.07
SSBP1-205ENST00000465582 TSR1Q2NL82 804 aaKnown RBP8.38□□□□□ -1.07
SSBP1-205ENST00000465582 INTS5Q6P9B9 1019 aaKnown RBP8.38□□□□□ -1.07
SSBP1-205ENST00000465582 ZNF454Q8N9F8 522 aa8.38□□□□□ -1.07
SSBP1-205ENST00000465582 REPIN1Q9BWE0 567 aaKnown RBP8.38□□□□□ -1.07
SSBP1-205ENST00000465582 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-205ENST00000465582 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
SSBP1-205ENST00000465582 USP16Q9Y5T5 823 aa8.38□□□□□ -1.07
SSBP1-205ENST00000465582 IL16Q14005 1332 aa8.37□□□□□ -1.07
SSBP1-205ENST00000465582 APBB1O00213 710 aa8.37□□□□□ -1.07
SSBP1-205ENST00000465582 GIGYF1O75420 1035 aaPredicted RBP8.37□□□□□ -1.07
SSBP1-205ENST00000465582 ZBTB7AO95365 584 aa8.37□□□□□ -1.07
SSBP1-205ENST00000465582 A1BGP04217 495 aa8.37□□□□□ -1.07
SSBP1-205ENST00000465582 SSFA2P28290 1259 aa8.37□□□□□ -1.07
SSBP1-205ENST00000465582 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSBP1-205ENST00000465582 RC3H1Q5TC82 1133 aaKnown RBP8.37□□□□□ -1.07
SSBP1-205ENST00000465582 MSL1Q68DK7 614 aa8.37□□□□□ -1.07
SSBP1-205ENST00000465582 COL23A1Q86Y22 540 aaPredicted RBP8.37□□□□□ -1.07
SSBP1-205ENST00000465582 PXYLP1Q8TE99 480 aa8.37□□□□□ -1.07
SSBP1-205ENST00000465582 NECTIN2Q92692 538 aa8.37□□□□□ -1.07
SSBP1-205ENST00000465582 RTCBQ9Y3I0 505 aaKnown RBP8.37□□□□□ -1.07
SSBP1-205ENST00000465582 ZNF330Q9Y3S2 320 aaPredicted RBP8.37□□□□□ -1.07
SSBP1-205ENST00000465582 STARD3NLO95772 234 aa8.36□□□□□ -1.07
SSBP1-205ENST00000465582 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
SSBP1-205ENST00000465582 TEX13AQ9BXU3 409 aaPredicted RBP8.36□□□□□ -1.07
SSBP1-205ENST00000465582 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
SSBP1-205ENST00000465582 ANKRD36CQ5JPF3 1778 aa8.35□□□□□ -1.07
SSBP1-205ENST00000465582 ARFGEF2Q9Y6D5 1785 aa8.35□□□□□ -1.07
SSBP1-205ENST00000465582 USP42Q9H9J4 1324 aaKnown RBP8.35□□□□□ -1.07
SSBP1-205ENST00000465582 NBPF26B4DH59 902 aa8.35□□□□□ -1.07
SSBP1-205ENST00000465582 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
SSBP1-205ENST00000465582 ANXA1P04083 346 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms