RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PLVAPQ9BX97 442 aa11.19□□□□□ -0.62
SMC4-205ENST00000465563 IGFBP4P22692 258 aa11.18□□□□□ -0.62
SMC4-205ENST00000465563 C1QTNF9BB2RNN3 333 aa11.17□□□□□ -0.62
SMC4-205ENST00000465563 LGR5O75473 907 aa11.17□□□□□ -0.62
SMC4-205ENST00000465563 BAG6P46379 1132 aa11.17□□□□□ -0.62
SMC4-205ENST00000465563 RTN1Q16799 776 aa11.17□□□□□ -0.62
SMC4-205ENST00000465563 ADAM23O75077 832 aa11.16□□□□□ -0.62
SMC4-205ENST00000465563 ADH7P40394 386 aa11.16□□□□□ -0.62
SMC4-205ENST00000465563 CD163Q86VB7 1156 aa11.16□□□□□ -0.62
SMC4-205ENST00000465563 ZNF777Q9ULD5 760 aaPredicted RBP11.16□□□□□ -0.62
SMC4-205ENST00000465563 SPDYE3A6NKU9 549 aa11.15□□□□□ -0.62
SMC4-205ENST00000465563 BHMTQ93088 406 aa11.15□□□□□ -0.62
SMC4-205ENST00000465563 M0R082 166 aa11.14□□□□□ -0.63
SMC4-205ENST00000465563 CFAP70Q5T0N1 1121 aa11.14□□□□□ -0.63
SMC4-205ENST00000465563 IER5Q5VY09 327 aa11.14□□□□□ -0.63
SMC4-205ENST00000465563 ZNF417Q8TAU3 575 aa11.14□□□□□ -0.63
SMC4-205ENST00000465563 ARXQ96QS3 562 aa11.14□□□□□ -0.63
SMC4-205ENST00000465563 ZNF587Q96SQ5 575 aaPredicted RBP11.14□□□□□ -0.63
SMC4-205ENST00000465563 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
SMC4-205ENST00000465563 SPATA31C1P0DKV0 1188 aa11.13□□□□□ -0.63
SMC4-205ENST00000465563 CHRNA4P43681 627 aa11.13□□□□□ -0.63
SMC4-205ENST00000465563 TGFBR3LH3BV60 316 aa11.12□□□□□ -0.63
SMC4-205ENST00000465563 MICALL1Q8N3F8 863 aa11.12□□□□□ -0.63
SMC4-205ENST00000465563 EFCC1Q9HA90 598 aa11.12□□□□□ -0.63
SMC4-205ENST00000465563 PRDM6Q9NQX0 595 aa11.12□□□□□ -0.63
SMC4-205ENST00000465563 K7ELQ4 463 aaPredicted RBP11.11□□□□□ -0.63
SMC4-205ENST00000465563 ALBP02768 609 aa11.11□□□□□ -0.63
SMC4-205ENST00000465563 PRRT3Q5FWE3 981 aa11.11□□□□□ -0.63
SMC4-205ENST00000465563 FAM200AQ8TCP9 573 aa11.11□□□□□ -0.63
SMC4-205ENST00000465563 WEE1P30291 646 aa11.1□□□□□ -0.63
SMC4-205ENST00000465563 DMGDHQ9UI17 866 aaKnown RBP11.1□□□□□ -0.63
SMC4-205ENST00000465563 BCS1LQ9Y276 419 aa11.1□□□□□ -0.63
SMC4-205ENST00000465563 FOXO3O43524 673 aa11.09□□□□□ -0.63
SMC4-205ENST00000465563 RFX1P22670 979 aa11.09□□□□□ -0.63
SMC4-205ENST00000465563 C8orf86Q6ZUL3 223 aa11.09□□□□□ -0.63
SMC4-205ENST00000465563 VTI1AQ96AJ9 217 aa11.09□□□□□ -0.63
SMC4-205ENST00000465563 UBE2OQ9C0C9 1292 aaKnown RBP11.09□□□□□ -0.63
SMC4-205ENST00000465563 FURINP09958 794 aa11.08□□□□□ -0.64
SMC4-205ENST00000465563 TBC1D8BQ0IIM8 1120 aa11.08□□□□□ -0.64
SMC4-205ENST00000465563 COL9A3Q14050 684 aaPredicted RBP11.08□□□□□ -0.64
SMC4-205ENST00000465563 PNMA5Q96PV4 448 aa11.08□□□□□ -0.64
SMC4-205ENST00000465563 GSX2Q9BZM3 304 aa11.08□□□□□ -0.64
SMC4-205ENST00000465563 IGFLR1Q9H665 355 aa11.08□□□□□ -0.64
SMC4-205ENST00000465563 KLK14Q9P0G3 267 aa11.08□□□□□ -0.64
SMC4-205ENST00000465563 EPB42P16452 691 aa11.07□□□□□ -0.64
SMC4-205ENST00000465563 CCINQ13939 588 aa11.07□□□□□ -0.64
SMC4-205ENST00000465563 CDCA8Q53HL2 280 aa11.07□□□□□ -0.64
SMC4-205ENST00000465563 C20orf204Q6ZNR8 217 aa11.07□□□□□ -0.64
SMC4-205ENST00000465563 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.07□□□□□ -0.64
SMC4-205ENST00000465563 DGKZQ13574 1117 aa11.06□□□□□ -0.64
SMC4-205ENST00000465563 QTRT2Q9H974 415 aaKnown RBP11.06□□□□□ -0.64
SMC4-205ENST00000465563 SLC6A14Q9UN76 642 aa11.06□□□□□ -0.64
SMC4-205ENST00000465563 LILRB5O75023 590 aa11.05□□□□□ -0.64
SMC4-205ENST00000465563 NID1P14543 1247 aa11.05□□□□□ -0.64
SMC4-205ENST00000465563 INPP5BP32019 993 aa11.05□□□□□ -0.64
SMC4-205ENST00000465563 IDH3AP50213 366 aa11.05□□□□□ -0.64
SMC4-205ENST00000465563 TRIM28Q13263 835 aaKnown RBP11.05□□□□□ -0.64
SMC4-205ENST00000465563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMC4-205ENST00000465563 NOVA2Q9UNW9 492 aaKnown RBP11.05□□□□□ -0.64
SMC4-205ENST00000465563 APBA3O96018 575 aa11.04□□□□□ -0.64
SMC4-205ENST00000465563 NFKB1P19838 968 aa11.04□□□□□ -0.64
SMC4-205ENST00000465563 GATA4P43694 442 aa11.04□□□□□ -0.64
SMC4-205ENST00000465563 C11orf91Q3C1V1 193 aa11.03□□□□□ -0.64
SMC4-205ENST00000465563 MYO19Q96H55 970 aa11.03□□□□□ -0.64
SMC4-205ENST00000465563 DNAJB12Q9NXW2 375 aaKnown RBP11.03□□□□□ -0.64
SMC4-205ENST00000465563 FAM229AH3BQW9 127 aa11.02□□□□□ -0.65
SMC4-205ENST00000465563 ARSDP51689 593 aa11.02□□□□□ -0.65
SMC4-205ENST00000465563 MICAL2O94851 1124 aa11.01□□□□□ -0.65
SMC4-205ENST00000465563 GRNP28799 593 aaKnown RBP11.01□□□□□ -0.65
SMC4-205ENST00000465563 TRAPPC3LQ5T215 181 aa11.01□□□□□ -0.65
SMC4-205ENST00000465563 JPH1Q9HDC5 661 aaPredicted RBP11.01□□□□□ -0.65
SMC4-205ENST00000465563 C11orf16Q9NQ32 467 aa11.01□□□□□ -0.65
SMC4-205ENST00000465563 DOC2BQ14184 412 aa11□□□□□ -0.65
SMC4-205ENST00000465563 PCSK7Q16549 785 aa11□□□□□ -0.65
SMC4-205ENST00000465563 NUDT8Q8WV74 236 aa11□□□□□ -0.65
SMC4-205ENST00000465563 NACC1Q96RE7 527 aa11□□□□□ -0.65
SMC4-205ENST00000465563 MAP3K6O95382 1288 aa10.99□□□□□ -0.65
SMC4-205ENST00000465563 SWI5Q1ZZU3 235 aa10.99□□□□□ -0.65
SMC4-205ENST00000465563 PSAPL1Q6NUJ1 521 aa10.99□□□□□ -0.65
SMC4-205ENST00000465563 IFT43Q96FT9 208 aa10.99□□□□□ -0.65
SMC4-205ENST00000465563 ACIN1Q9UKV3 1341 aaKnown RBP10.99□□□□□ -0.65
SMC4-205ENST00000465563 RGS9O75916 674 aaPredicted RBP10.97□□□□□ -0.65
SMC4-205ENST00000465563 FKBP5Q13451 457 aaPredicted RBP10.97□□□□□ -0.65
SMC4-205ENST00000465563 ELOAQ14241 798 aaKnown RBP10.97□□□□□ -0.65
SMC4-205ENST00000465563 GRIK4Q16099 956 aa10.97□□□□□ -0.65
SMC4-205ENST00000465563 KRT25Q7Z3Z0 450 aa10.97□□□□□ -0.65
SMC4-205ENST00000465563 PRIMPOLQ96LW4 560 aa10.97□□□□□ -0.65
SMC4-205ENST00000465563 NAGPAQ9UK23 515 aa10.97□□□□□ -0.65
SMC4-205ENST00000465563 LRFN2Q9ULH4 789 aa10.97□□□□□ -0.65
SMC4-205ENST00000465563 AFF1P51825 1210 aaKnown RBP10.96□□□□□ -0.65
SMC4-205ENST00000465563 FAM35AQ86V20 835 aa10.96□□□□□ -0.65
SMC4-205ENST00000465563 ZFATQ9P243 1243 aa10.96□□□□□ -0.65
SMC4-205ENST00000465563 A0A0A0MRY4 1105 aa10.95□□□□□ -0.66
SMC4-205ENST00000465563 TARSP26639 723 aaKnown RBP10.95□□□□□ -0.66
SMC4-205ENST00000465563 RAC1P63000 192 aa10.95□□□□□ -0.66
SMC4-205ENST00000465563 DHX32Q7L7V1 743 aaKnown RBP10.95□□□□□ -0.66
SMC4-205ENST00000465563 ZMIZ1Q9ULJ6 1067 aa10.95□□□□□ -0.66
SMC4-205ENST00000465563 OPLAHO14841 1288 aa10.94□□□□□ -0.66
SMC4-205ENST00000465563 PRMT3O60678 531 aa10.94□□□□□ -0.66
SMC4-205ENST00000465563 SASH3O75995 380 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms