RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ALDH1L2Q3SY69 923 aa26■■□□□ 1.75
SKA3-205ENST00000465471 NUTM1Q86Y26 1132 aa26■■□□□ 1.75
SKA3-205ENST00000465471 MRPL50Q8N5N7 158 aaKnown RBP26■■□□□ 1.75
SKA3-205ENST00000465471 SSH1Q8WYL5 1049 aa26■■□□□ 1.75
SKA3-205ENST00000465471 UTP14AQ9BVJ6 771 aaKnown RBP26■■□□□ 1.75
SKA3-205ENST00000465471 ARFGEF1Q9Y6D6 1849 aa26■■□□□ 1.75
SKA3-205ENST00000465471 ATP5J2-PTCD1G3V325 749 aa25.99■■□□□ 1.75
SKA3-205ENST00000465471 YBX3P16989 372 aaKnown RBP eCLIP25.99■■□□□ 1.75
SKA3-205ENST00000465471 ERFEQ4G0M1 354 aa25.99■■□□□ 1.75
SKA3-205ENST00000465471 LAMB2P55268 1798 aa25.98■■□□□ 1.75
SKA3-205ENST00000465471 FKBP5Q13451 457 aaPredicted RBP25.98■■□□□ 1.75
SKA3-205ENST00000465471 C2CD5Q86YS7 1000 aa25.98■■□□□ 1.75
SKA3-205ENST00000465471 MYD88Q99836 296 aa25.98■■□□□ 1.75
SKA3-205ENST00000465471 DDX60Q8IY21 1712 aaKnown RBP25.97■■□□□ 1.75
SKA3-205ENST00000465471 SLC10A5Q5PT55 438 aa25.97■■□□□ 1.75
SKA3-205ENST00000465471 H0YIN7 160 aa25.96■■□□□ 1.75
SKA3-205ENST00000465471 GTF2E1P29083 439 aaPredicted RBP25.96■■□□□ 1.75
SKA3-205ENST00000465471 PIM2Q9P1W9 311 aa25.96■■□□□ 1.75
SKA3-205ENST00000465471 IGKV5-2P06315 115 aa25.95■■□□□ 1.74
SKA3-205ENST00000465471 SRGNP10124 158 aa25.95■■□□□ 1.74
SKA3-205ENST00000465471 GPR162Q16538 588 aa25.95■■□□□ 1.74
SKA3-205ENST00000465471 CRY2Q49AN0 593 aa25.95■■□□□ 1.74
SKA3-205ENST00000465471 CCDC191Q8NCU4 936 aa25.95■■□□□ 1.74
SKA3-205ENST00000465471 DNAAF4Q8WXU2 420 aa25.95■■□□□ 1.74
SKA3-205ENST00000465471 TRMT112Q9UI30 125 aaKnown RBP25.95■■□□□ 1.74
SKA3-205ENST00000465471 SH3TC1Q8TE82 1336 aa25.94■■□□□ 1.74
SKA3-205ENST00000465471 BRPF1P55201 1214 aaPredicted RBP25.94■■□□□ 1.74
SKA3-205ENST00000465471 DCAF8L1A6NGE4 600 aa25.93■■□□□ 1.74
SKA3-205ENST00000465471 WWC3Q9ULE0 1092 aa25.93■■□□□ 1.74
SKA3-205ENST00000465471 RARSP54136 660 aaKnown RBP25.92■■□□□ 1.74
SKA3-205ENST00000465471 NEXNQ0ZGT2 675 aa25.92■■□□□ 1.74
SKA3-205ENST00000465471 STYK1Q6J9G0 422 aa25.92■■□□□ 1.74
SKA3-205ENST00000465471 PELP1Q8IZL8 1130 aaKnown RBP25.92■■□□□ 1.74
SKA3-205ENST00000465471 SYNE4Q8N205 404 aa25.92■■□□□ 1.74
SKA3-205ENST00000465471 BCL2L13Q9BXK5 485 aa25.92■■□□□ 1.74
SKA3-205ENST00000465471 CWC25Q9NXE8 425 aaPredicted RBP25.92■■□□□ 1.74
SKA3-205ENST00000465471 PTPRCP08575 1304 aa25.91■■□□□ 1.74
SKA3-205ENST00000465471 NEURL1BA8MQ27 555 aa25.91■■□□□ 1.74
SKA3-205ENST00000465471 DALRD3Q5D0E6 543 aaKnown RBP25.91■■□□□ 1.74
SKA3-205ENST00000465471 MASTLQ96GX5 879 aa25.91■■□□□ 1.74
SKA3-205ENST00000465471 SMC4Q9NTJ3 1288 aa25.91■■□□□ 1.74
SKA3-205ENST00000465471 F6X3S4 739 aa25.9■■□□□ 1.74
SKA3-205ENST00000465471 NPR1P16066 1061 aa25.9■■□□□ 1.74
SKA3-205ENST00000465471 C3orf67Q6ZVT6 689 aa25.9■■□□□ 1.74
SKA3-205ENST00000465471 ZBTB38Q8NAP3 1195 aaPredicted RBP25.9■■□□□ 1.74
SKA3-205ENST00000465471 LINS1Q8NG48 757 aa25.9■■□□□ 1.74
SKA3-205ENST00000465471 BCS1LQ9Y276 419 aa25.9■■□□□ 1.74
SKA3-205ENST00000465471 CACNA1SQ13698 1873 aa25.89■■□□□ 1.74
SKA3-205ENST00000465471 GRIN3BO60391 1043 aa25.89■■□□□ 1.74
SKA3-205ENST00000465471 PCCAP05165 728 aaPredicted RBP25.89■■□□□ 1.74
SKA3-205ENST00000465471 CWF19L2Q2TBE0 894 aaKnown RBP25.89■■□□□ 1.74
SKA3-205ENST00000465471 TTLL6Q8N841 843 aa25.89■■□□□ 1.74
SKA3-205ENST00000465471 FAM89AQ96GI7 184 aa25.89■■□□□ 1.74
SKA3-205ENST00000465471 SLX4Q8IY92 1834 aa25.88■■□□□ 1.73
SKA3-205ENST00000465471 BEND3Q5T5X7 828 aa25.88■■□□□ 1.73
SKA3-205ENST00000465471 HCLS1P14317 486 aaPredicted RBP25.87■■□□□ 1.73
SKA3-205ENST00000465471 HOXA10P31260 410 aaPredicted RBP25.87■■□□□ 1.73
SKA3-205ENST00000465471 CNKSR1Q969H4 720 aa25.87■■□□□ 1.73
SKA3-205ENST00000465471 ZNF622Q969S3 477 aaKnown RBP eCLIP25.87■■□□□ 1.73
SKA3-205ENST00000465471 NLRP3Q96P20 1036 aa25.87■■□□□ 1.73
SKA3-205ENST00000465471 CHD4Q14839 1912 aa25.86■■□□□ 1.73
SKA3-205ENST00000465471 CDHR2Q9BYE9 1310 aa25.86■■□□□ 1.73
SKA3-205ENST00000465471 GCKRQ14397 625 aa25.85■■□□□ 1.73
SKA3-205ENST00000465471 IRS4O14654 1257 aaPredicted RBP25.84■■□□□ 1.73
SKA3-205ENST00000465471 H7C1W4 665 aa25.83■■□□□ 1.73
SKA3-205ENST00000465471 PRPF40BQ6NWY9 871 aaKnown RBP25.83■■□□□ 1.73
SKA3-205ENST00000465471 KIF16BQ96L93 1317 aa25.83■■□□□ 1.73
SKA3-205ENST00000465471 CASP7P55210 303 aa25.82■■□□□ 1.72
SKA3-205ENST00000465471 SF3B3Q15393 1217 aaKnown RBP25.82■■□□□ 1.72
SKA3-205ENST00000465471 RTL5Q5HYW3 569 aaPredicted RBP25.82■■□□□ 1.72
SKA3-205ENST00000465471 RPGRQ92834 1020 aaKnown RBP25.82■■□□□ 1.72
SKA3-205ENST00000465471 CRAMP1Q96RY5 1269 aa25.82■■□□□ 1.72
SKA3-205ENST00000465471 MYH3P11055 1940 aa25.82■■□□□ 1.72
SKA3-205ENST00000465471 ALDH1L1O75891 902 aa25.81■■□□□ 1.72
SKA3-205ENST00000465471 ALDH1B1P30837 517 aa25.81■■□□□ 1.72
SKA3-205ENST00000465471 C7orf43Q8WVR3 580 aa25.81■■□□□ 1.72
SKA3-205ENST00000465471 NOB1Q9ULX3 412 aaKnown RBP25.81■■□□□ 1.72
SKA3-205ENST00000465471 FER1L6Q2WGJ9 1857 aa25.81■■□□□ 1.72
SKA3-205ENST00000465471 HSP90B1P14625 803 aaKnown RBP25.8■■□□□ 1.72
SKA3-205ENST00000465471 JARID2Q92833 1246 aaPredicted RBP25.8■■□□□ 1.72
SKA3-205ENST00000465471 RBM17Q96I25 401 aaKnown RBP25.8■■□□□ 1.72
SKA3-205ENST00000465471 BCAR3O75815 825 aa25.79■■□□□ 1.72
SKA3-205ENST00000465471 SLC4A10Q6U841 1118 aa25.79■■□□□ 1.72
SKA3-205ENST00000465471 ARHGAP45Q92619 1136 aa25.79■■□□□ 1.72
SKA3-205ENST00000465471 SRCIN1Q9C0H9 1055 aa25.79■■□□□ 1.72
SKA3-205ENST00000465471 PDE8AO60658 829 aa25.78■■□□□ 1.72
SKA3-205ENST00000465471 UBE3BQ7Z3V4 1068 aa25.78■■□□□ 1.72
SKA3-205ENST00000465471 ABCC4O15439 1325 aa25.78■■□□□ 1.72
SKA3-205ENST00000465471 SNED1Q8TER0 1413 aa25.78■■□□□ 1.72
SKA3-205ENST00000465471 COL4A1P02462 1669 aa25.77■■□□□ 1.72
SKA3-205ENST00000465471 TAF1P21675 1872 aa25.77■■□□□ 1.72
SKA3-205ENST00000465471 PLA2G12BQ9BX93 195 aa25.77■■□□□ 1.72
SKA3-205ENST00000465471 API5Q9BZZ5 524 aaKnown RBP25.77■■□□□ 1.72
SKA3-205ENST00000465471 C21orf2O43822 256 aa25.76■■□□□ 1.71
SKA3-205ENST00000465471 SBF1O95248 1867 aa25.75■■□□□ 1.71
SKA3-205ENST00000465471 UTYO14607 1347 aa25.75■■□□□ 1.71
SKA3-205ENST00000465471 LRRC37AA6NMS7 1700 aa25.74■■□□□ 1.71
SKA3-205ENST00000465471 GRM8O00222 908 aa25.74■■□□□ 1.71
SKA3-205ENST00000465471 SOGA3Q5TF21 947 aa25.74■■□□□ 1.71
SKA3-205ENST00000465471 ARHGAP27Q6ZUM4 889 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms