RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 CWC25Q9NXE8 425 aaPredicted RBP23.5■■□□□ 1.35
SCAMP3-204ENST00000465312 WWC3Q9ULE0 1092 aa23.5■■□□□ 1.35
SCAMP3-204ENST00000465312 NTSR2O95665 410 aa23.49■■□□□ 1.35
SCAMP3-204ENST00000465312 CWF19L2Q2TBE0 894 aaKnown RBP23.49■■□□□ 1.35
SCAMP3-204ENST00000465312 PDE6BP35913 854 aa23.48■■□□□ 1.35
SCAMP3-204ENST00000465312 CCDC191Q8NCU4 936 aa23.48■■□□□ 1.35
SCAMP3-204ENST00000465312 IBTKQ9P2D0 1353 aaPredicted RBP23.48■■□□□ 1.35
SCAMP3-204ENST00000465312 A0A0G2JLW4 131 aa23.47■■□□□ 1.35
SCAMP3-204ENST00000465312 IPO8O15397 1037 aaKnown RBP23.47■■□□□ 1.35
SCAMP3-204ENST00000465312 C2CD5Q86YS7 1000 aa23.47■■□□□ 1.35
SCAMP3-204ENST00000465312 BRIP1Q9BX63 1249 aa23.47■■□□□ 1.35
SCAMP3-204ENST00000465312 API5Q9BZZ5 524 aaKnown RBP23.47■■□□□ 1.35
SCAMP3-204ENST00000465312 SH3TC1Q8TE82 1336 aa23.47■■□□□ 1.35
SCAMP3-204ENST00000465312 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
SCAMP3-204ENST00000465312 KIF13BQ9NQT8 1826 aa23.47■■□□□ 1.35
SCAMP3-204ENST00000465312 CHRNA5P30532 468 aa23.46■■□□□ 1.35
SCAMP3-204ENST00000465312 TGFB2P61812 414 aa23.46■■□□□ 1.35
SCAMP3-204ENST00000465312 LINS1Q8NG48 757 aa23.46■■□□□ 1.35
SCAMP3-204ENST00000465312 FAM89AQ96GI7 184 aa23.46■■□□□ 1.35
SCAMP3-204ENST00000465312 ABCC12Q96J65 1359 aa23.46■■□□□ 1.35
SCAMP3-204ENST00000465312 RNF123Q5XPI4 1314 aa23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 NEURL1BA8MQ27 555 aa23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 H0YIN7 160 aa23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 IGKV5-2P06315 115 aa23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 DPEP1P16444 411 aa23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 TRIM28Q13263 835 aaKnown RBP23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 JARID2Q92833 1246 aaPredicted RBP23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 SRCIN1Q9C0H9 1055 aa23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 RCAN3Q9UKA8 241 aa23.45■■□□□ 1.34
SCAMP3-204ENST00000465312 PXDNLA1KZ92 1463 aa23.44■■□□□ 1.34
SCAMP3-204ENST00000465312 DCAF8L1A6NGE4 600 aa23.44■■□□□ 1.34
SCAMP3-204ENST00000465312 ZNF622Q969S3 477 aaKnown RBP eCLIP23.44■■□□□ 1.34
SCAMP3-204ENST00000465312 ANKRD31Q8N7Z5 1873 aa23.44■■□□□ 1.34
SCAMP3-204ENST00000465312 HCLS1P14317 486 aaPredicted RBP23.43■■□□□ 1.34
SCAMP3-204ENST00000465312 SYNE4Q8N205 404 aa23.43■■□□□ 1.34
SCAMP3-204ENST00000465312 BRPF1P55201 1214 aaPredicted RBP23.42■■□□□ 1.34
SCAMP3-204ENST00000465312 BEND3Q5T5X7 828 aa23.42■■□□□ 1.34
SCAMP3-204ENST00000465312 ZKSCAN2Q63HK3 967 aa23.42■■□□□ 1.34
SCAMP3-204ENST00000465312 ZBTB38Q8NAP3 1195 aaPredicted RBP23.42■■□□□ 1.34
SCAMP3-204ENST00000465312 NLRP3Q96P20 1036 aa23.42■■□□□ 1.34
SCAMP3-204ENST00000465312 IRS4O14654 1257 aaPredicted RBP23.41■■□□□ 1.34
SCAMP3-204ENST00000465312 PCCAP05165 728 aaPredicted RBP23.41■■□□□ 1.34
SCAMP3-204ENST00000465312 GCKRQ14397 625 aa23.41■■□□□ 1.34
SCAMP3-204ENST00000465312 RPGRQ92834 1020 aaKnown RBP23.41■■□□□ 1.34
SCAMP3-204ENST00000465312 CLUAP1Q96AJ1 413 aa23.41■■□□□ 1.34
SCAMP3-204ENST00000465312 C9orf78Q9NZ63 289 aaPredicted RBP23.41■■□□□ 1.34
SCAMP3-204ENST00000465312 PDZRN3Q9UPQ7 1066 aa23.41■■□□□ 1.34
SCAMP3-204ENST00000465312 TNRC6CQ9HCJ0 1690 aaKnown RBP23.41■■□□□ 1.34
SCAMP3-204ENST00000465312 HSP90B1P14625 803 aaKnown RBP23.4■■□□□ 1.34
SCAMP3-204ENST00000465312 GPR162Q16538 588 aa23.4■■□□□ 1.34
SCAMP3-204ENST00000465312 UBE3BQ7Z3V4 1068 aa23.4■■□□□ 1.34
SCAMP3-204ENST00000465312 FTSJ3Q8IY81 847 aaKnown RBP23.4■■□□□ 1.34
SCAMP3-204ENST00000465312 PIM2Q9P1W9 311 aa23.4■■□□□ 1.34
SCAMP3-204ENST00000465312 ATF7IPQ6VMQ6 1270 aa23.39■■□□□ 1.33
SCAMP3-204ENST00000465312 ARHGAP45Q92619 1136 aa23.39■■□□□ 1.33
SCAMP3-204ENST00000465312 BCS1LQ9Y276 419 aa23.39■■□□□ 1.33
SCAMP3-204ENST00000465312 COL11A2P13942 1736 aaPredicted RBP23.39■■□□□ 1.33
SCAMP3-204ENST00000465312 ALDH1L1O75891 902 aa23.38■■□□□ 1.33
SCAMP3-204ENST00000465312 CCT4P50991 539 aaKnown RBP23.38■■□□□ 1.33
SCAMP3-204ENST00000465312 KIAA1551Q9HCM1 1747 aa23.38■■□□□ 1.33
SCAMP3-204ENST00000465312 TRIM27P14373 513 aa23.37■■□□□ 1.33
SCAMP3-204ENST00000465312 MASTLQ96GX5 879 aa23.37■■□□□ 1.33
SCAMP3-204ENST00000465312 NPR1P16066 1061 aa23.36■■□□□ 1.33
SCAMP3-204ENST00000465312 DALRD3Q5D0E6 543 aaKnown RBP23.36■■□□□ 1.33
SCAMP3-204ENST00000465312 CACNA1SQ13698 1873 aa23.36■■□□□ 1.33
SCAMP3-204ENST00000465312 DDX60Q8IY21 1712 aaKnown RBP23.36■■□□□ 1.33
SCAMP3-204ENST00000465312 RIC1Q4ADV7 1423 aa23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 SRGNP10124 158 aa23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 SLC10A5Q5PT55 438 aa23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 C3orf67Q6ZVT6 689 aa23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 RBM17Q96I25 401 aaKnown RBP23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 ZNF219Q9P2Y4 722 aaPredicted RBP23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 TNNQ9UQP3 1299 aa23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 LAMB2P55268 1798 aa23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 DLEC1Q9Y238 1755 aa23.35■■□□□ 1.33
SCAMP3-204ENST00000465312 CDHR2Q9BYE9 1310 aa23.34■■□□□ 1.33
SCAMP3-204ENST00000465312 GRM8O00222 908 aa23.34■■□□□ 1.33
SCAMP3-204ENST00000465312 PDE8AO60658 829 aa23.34■■□□□ 1.33
SCAMP3-204ENST00000465312 STYK1Q6J9G0 422 aa23.34■■□□□ 1.33
SCAMP3-204ENST00000465312 TTLL6Q8N841 843 aa23.34■■□□□ 1.33
SCAMP3-204ENST00000465312 CNKSR1Q969H4 720 aa23.34■■□□□ 1.33
SCAMP3-204ENST00000465312 CCDC85AQ96PX6 553 aaPredicted RBP23.34■■□□□ 1.33
SCAMP3-204ENST00000465312 H7C1W4 665 aa23.33■■□□□ 1.33
SCAMP3-204ENST00000465312 ABCC4O15439 1325 aa23.33■■□□□ 1.32
SCAMP3-204ENST00000465312 KCNA3P22001 575 aa23.32■■□□□ 1.32
SCAMP3-204ENST00000465312 DDX46Q7L014 1031 aaKnown RBP23.32■■□□□ 1.32
SCAMP3-204ENST00000465312 DZIP1LQ8IYY4 767 aaKnown RBP23.32■■□□□ 1.32
SCAMP3-204ENST00000465312 CHMP3Q9Y3E7 222 aa23.32■■□□□ 1.32
SCAMP3-204ENST00000465312 PLIN1O60240 522 aa23.31■■□□□ 1.32
SCAMP3-204ENST00000465312 CCDC152Q4G0S7 254 aa23.31■■□□□ 1.32
SCAMP3-204ENST00000465312 KLRG2A4D1S0 409 aaPredicted RBP23.3■■□□□ 1.32
SCAMP3-204ENST00000465312 MS4A1P11836 297 aa23.3■■□□□ 1.32
SCAMP3-204ENST00000465312 ALDH1B1P30837 517 aa23.3■■□□□ 1.32
SCAMP3-204ENST00000465312 CTSWP56202 376 aa23.3■■□□□ 1.32
SCAMP3-204ENST00000465312 CRY2Q49AN0 593 aa23.3■■□□□ 1.32
SCAMP3-204ENST00000465312 ITPRIPQ8IWB1 547 aa23.3■■□□□ 1.32
SCAMP3-204ENST00000465312 BRCA1P38398 1863 aaKnown RBP23.3■■□□□ 1.32
SCAMP3-204ENST00000465312 PRPF40BQ6NWY9 871 aaKnown RBP23.29■■□□□ 1.32
SCAMP3-204ENST00000465312 TMEM57Q8N5G2 664 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms